| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is recG [H]
Identifier: 222151060
GI number: 222151060
Start: 881788
End: 883824
Strand: Direct
Name: recG [H]
Synonym: MCCL_0811
Alternate gene names: 222151060
Gene position: 881788-883824 (Clockwise)
Preceding gene: 222151059
Following gene: 222151061
Centisome position: 41.94
GC content: 40.06
Gene sequence:
>2037_bases TTGGAAAATCAGCATCTTCTAATAACAGATAGTACATTGAAGGAGTTAAAAGGTGTCGGTCCGAAATCTTTAGAGAGTCT CAATTCACTCAACATACATTCTATTGAAGATCTCATATTATATCTGCCTTATAAATATGAAGATGAAACCGTCATTAATT TACATGAAGCCGAAGATGGTGCAAAAATAACGGTGCAGGGTGAAATTTACTCTGCGCCTGTTTTGGCTCATTTTGGTCGC GGAAAATCTAAAGTATCATTCCATATGATGGTTGACAATGTCGCGGTGAAAATAGAATTCTTTAATCAGATGTACGTGAA ACGGATTGCAGAAATAGGCAAGACGGTTAAAGTAACCGGTAAATGGAACAGGTCGAAACAGGTGATTCAAGGCAGTAAAA TATCAGAAGATGAACATTCAGGTGTGCAGCTTGTCCCGCAATATAGTCTGAAAGGTTTGATTAAGCGCGCGCAGTTTAGA AAGATGATTGACAGCGCGTTTCAGACCGTGAAAATTCAGCCCTTTTTGCCGGAACATTTAAAAGTGAGATATAAACTTTG GGATCTGGATCAATCGCTATATGAGTTACATATTCCTTCAAGCCATAAACATCTGCAGCAGGCACGTAGAAGTTTTGCGT TTTGTGAATTATTACTCTTTCAACTAAAGATGCGGATGCTTAATCAGCTTGAACAAAGCGGAGCGCCACATAGCAAGGTT GATTATGATATCACGAAGGTTAAGGCGTTTATTGATACCCTGCCATTCGAATTGACAGAAGCACAGAAACAAGTGGTCAA TGAAATATTTCGGGATATGAAGCATGAATTTCGCATGAATAGGCTGCTTCAAGGTGACGTAGGATCAGGGAAGACAATCG TTGCTGCAATTTGCATGTATGCATTAATGACTGCAGGTAGACAAAGTGCATTGATGGTGCCTACTGAGATACTGGCTGAA CAGCATGCAGAAAGTTTATCTGAAATCTATGGTGAATCACTAAACATAGCACTCCTTACAAGTTCCATCAAAGGTAAAAA GCGGAGATTAATTTTAGAAGCGTTAGAACGTGGCGATATCGATATTATTGTAGGTACGCATGCGCTTATCAGTGAACCCG TTCAATTTAATGATCTCGGTCTAGTCATTACTGATGAGCAGCATAGGTTTGGAGTAAATCAGCGTAAATTATTACGTGAA AAAGGTAATGATGCAAATGTACTCTTTATGACAGCGACACCGATACCACGTACATTAGCAATCTCTGTATTTGGTGAACT TGACGTTTCAACGATTAAACAGATGCCAAAAGGACGTAAACCCATTATTACAGAATGGGCGAAACATGAGGAAATTGAAA TTGTGCATGACAAGACTGCACGTGAAATACGAGCGGGCCGACAAGTCTACGTAATATGTCCGCTGATTGAAGCTTCACAA CATCTGGATGTAAAAAACGCGACTGAAATCTATGAAGCTTATCAAAGGCTATTTGGCACTGATAAAGTAGGATTACTTCA TGGTAAGATGAAGACAGAAGAAAAAGATGAAGTGATGAATAAATTCCAAAATCATGACTTTGATGTTATAGTGTCTACAA CAGTGGTTGAAGTCGGTGTGAATGTTCCGAACGCAACGATGATTGTCATCTATGATGCAGAACGTTTTGGTTTATCTACC TTGCATCAGTTAAGAGGTCGTGTCGGTCGAAGTTCTTATCAAAGTTATTGTATATTGGTGGGCAATCCAGAAAGCGAAAC AGGAATTGAAAGGTTGCAGATTATGACGCAGACAACAGATGGCTTTGTACTCAGTGAAAAGGATCTGGAAATGAGAGGGC CGGGTGACTTCTTCGGCATTAAGCAAAGTGGTCTACCGGACTTTAAGGTAGCAAATATTGTTGAGGATTATCGCATGCTG GAAGTCGCACGTGACGAAGCAAGCGAGCTAATACTAAGTGGTGCAATCGAACAACCTGAATTACGCGCATTAAAGATGCG TCTAGATGCAGACCTTGCAGTACATCAACTTGACTAA
Upstream 100 bases:
>100_bases ATGTATAAGATAGGTTTAACAATGCCAAGTGCACTGCGTGAGACAGGTCGTGGAGGTCTTGCAGGCACTAAGACTGGCCA GGAAATGAAGGAAAGAATCT
Downstream 100 bases:
>100_bases GAGGAGATTGAAATGAGAGTTATCGTAAGATTGATGGGAGTTCTATGTATCATAGCAGCGATTACGATGTTTTTCTGGCA GGATATTCGTGCGTATTTCA
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 678; Mature: 678
Protein sequence:
>678_residues MENQHLLITDSTLKELKGVGPKSLESLNSLNIHSIEDLILYLPYKYEDETVINLHEAEDGAKITVQGEIYSAPVLAHFGR GKSKVSFHMMVDNVAVKIEFFNQMYVKRIAEIGKTVKVTGKWNRSKQVIQGSKISEDEHSGVQLVPQYSLKGLIKRAQFR KMIDSAFQTVKIQPFLPEHLKVRYKLWDLDQSLYELHIPSSHKHLQQARRSFAFCELLLFQLKMRMLNQLEQSGAPHSKV DYDITKVKAFIDTLPFELTEAQKQVVNEIFRDMKHEFRMNRLLQGDVGSGKTIVAAICMYALMTAGRQSALMVPTEILAE QHAESLSEIYGESLNIALLTSSIKGKKRRLILEALERGDIDIIVGTHALISEPVQFNDLGLVITDEQHRFGVNQRKLLRE KGNDANVLFMTATPIPRTLAISVFGELDVSTIKQMPKGRKPIITEWAKHEEIEIVHDKTAREIRAGRQVYVICPLIEASQ HLDVKNATEIYEAYQRLFGTDKVGLLHGKMKTEEKDEVMNKFQNHDFDVIVSTTVVEVGVNVPNATMIVIYDAERFGLST LHQLRGRVGRSSYQSYCILVGNPESETGIERLQIMTQTTDGFVLSEKDLEMRGPGDFFGIKQSGLPDFKVANIVEDYRML EVARDEASELILSGAIEQPELRALKMRLDADLAVHQLD
Sequences:
>Translated_678_residues MENQHLLITDSTLKELKGVGPKSLESLNSLNIHSIEDLILYLPYKYEDETVINLHEAEDGAKITVQGEIYSAPVLAHFGR GKSKVSFHMMVDNVAVKIEFFNQMYVKRIAEIGKTVKVTGKWNRSKQVIQGSKISEDEHSGVQLVPQYSLKGLIKRAQFR KMIDSAFQTVKIQPFLPEHLKVRYKLWDLDQSLYELHIPSSHKHLQQARRSFAFCELLLFQLKMRMLNQLEQSGAPHSKV DYDITKVKAFIDTLPFELTEAQKQVVNEIFRDMKHEFRMNRLLQGDVGSGKTIVAAICMYALMTAGRQSALMVPTEILAE QHAESLSEIYGESLNIALLTSSIKGKKRRLILEALERGDIDIIVGTHALISEPVQFNDLGLVITDEQHRFGVNQRKLLRE KGNDANVLFMTATPIPRTLAISVFGELDVSTIKQMPKGRKPIITEWAKHEEIEIVHDKTAREIRAGRQVYVICPLIEASQ HLDVKNATEIYEAYQRLFGTDKVGLLHGKMKTEEKDEVMNKFQNHDFDVIVSTTVVEVGVNVPNATMIVIYDAERFGLST LHQLRGRVGRSSYQSYCILVGNPESETGIERLQIMTQTTDGFVLSEKDLEMRGPGDFFGIKQSGLPDFKVANIVEDYRML EVARDEASELILSGAIEQPELRALKMRLDADLAVHQLD >Mature_678_residues MENQHLLITDSTLKELKGVGPKSLESLNSLNIHSIEDLILYLPYKYEDETVINLHEAEDGAKITVQGEIYSAPVLAHFGR GKSKVSFHMMVDNVAVKIEFFNQMYVKRIAEIGKTVKVTGKWNRSKQVIQGSKISEDEHSGVQLVPQYSLKGLIKRAQFR KMIDSAFQTVKIQPFLPEHLKVRYKLWDLDQSLYELHIPSSHKHLQQARRSFAFCELLLFQLKMRMLNQLEQSGAPHSKV DYDITKVKAFIDTLPFELTEAQKQVVNEIFRDMKHEFRMNRLLQGDVGSGKTIVAAICMYALMTAGRQSALMVPTEILAE QHAESLSEIYGESLNIALLTSSIKGKKRRLILEALERGDIDIIVGTHALISEPVQFNDLGLVITDEQHRFGVNQRKLLRE KGNDANVLFMTATPIPRTLAISVFGELDVSTIKQMPKGRKPIITEWAKHEEIEIVHDKTAREIRAGRQVYVICPLIEASQ HLDVKNATEIYEAYQRLFGTDKVGLLHGKMKTEEKDEVMNKFQNHDFDVIVSTTVVEVGVNVPNATMIVIYDAERFGLST LHQLRGRVGRSSYQSYCILVGNPESETGIERLQIMTQTTDGFVLSEKDLEMRGPGDFFGIKQSGLPDFKVANIVEDYRML EVARDEASELILSGAIEQPELRALKMRLDADLAVHQLD
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=672, Percent_Identity=38.6904761904762, Blast_Score=400, Evalue=1e-112, Organism=Escherichia coli, GI1787357, Length=390, Percent_Identity=36.6666666666667, Blast_Score=260, Evalue=2e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 76816; Mature: 76816
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENQHLLITDSTLKELKGVGPKSLESLNSLNIHSIEDLILYLPYKYEDETVINLHEAEDG CCCCEEEEECHHHHHHHCCCHHHHHHHCCCCCCCHHHHHEECCCCCCCCEEEEEEECCCC AKITVQGEIYSAPVLAHFGRGKSKVSFHMMVDNVAVKIEFFNQMYVKRIAEIGKTVKVTG CEEEEECCEECCCHHHHCCCCCCCEEEEEEECCEEEEEHHHHHHHHHHHHHCCCEEEEEE KWNRSKQVIQGSKISEDEHSGVQLVPQYSLKGLIKRAQFRKMIDSAFQTVKIQPFLPEHL CCCCCHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHH KVRYKLWDLDQSLYELHIPSSHKHLQQARRSFAFCELLLFQLKMRMLNQLEQSGAPHSKV EEEEEEECCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DYDITKVKAFIDTLPFELTEAQKQVVNEIFRDMKHEFRMNRLLQGDVGSGKTIVAAICMY CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH ALMTAGRQSALMVPTEILAEQHAESLSEIYGESLNIALLTSSIKGKKRRLILEALERGDI HHHHCCCCCEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCE DIIVGTHALISEPVQFNDLGLVITDEQHRFGVNQRKLLREKGNDANVLFMTATPIPRTLA EEEEECHHHHCCCCEECCEEEEEECCHHHCCCCHHHHHHHCCCCCEEEEEECCCCCCEEE ISVFGELDVSTIKQMPKGRKPIITEWAKHEEIEIVHDKTAREIRAGRQVYVICPLIEASQ EEEECCCCHHHHHHCCCCCCCCHHHHCCCCCEEEEECHHHHHHHCCCEEEEEEEECCCCC HLDVKNATEIYEAYQRLFGTDKVGLLHGKMKTEEKDEVMNKFQNHDFDVIVSTTVVEVGV CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEEEEECC NVPNATMIVIYDAERFGLSTLHQLRGRVGRSSYQSYCILVGNPESETGIERLQIMTQTTD CCCCCEEEEEECCHHCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHEEEEECCC GFVLSEKDLEMRGPGDFFGIKQSGLPDFKVANIVEDYRMLEVARDEASELILSGAIEQPE CEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH LRALKMRLDADLAVHQLD HHHHHHHHCCCCEEEECC >Mature Secondary Structure MENQHLLITDSTLKELKGVGPKSLESLNSLNIHSIEDLILYLPYKYEDETVINLHEAEDG CCCCEEEEECHHHHHHHCCCHHHHHHHCCCCCCCHHHHHEECCCCCCCCEEEEEEECCCC AKITVQGEIYSAPVLAHFGRGKSKVSFHMMVDNVAVKIEFFNQMYVKRIAEIGKTVKVTG CEEEEECCEECCCHHHHCCCCCCCEEEEEEECCEEEEEHHHHHHHHHHHHHCCCEEEEEE KWNRSKQVIQGSKISEDEHSGVQLVPQYSLKGLIKRAQFRKMIDSAFQTVKIQPFLPEHL CCCCCHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHH KVRYKLWDLDQSLYELHIPSSHKHLQQARRSFAFCELLLFQLKMRMLNQLEQSGAPHSKV EEEEEEECCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DYDITKVKAFIDTLPFELTEAQKQVVNEIFRDMKHEFRMNRLLQGDVGSGKTIVAAICMY CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH ALMTAGRQSALMVPTEILAEQHAESLSEIYGESLNIALLTSSIKGKKRRLILEALERGDI HHHHCCCCCEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCE DIIVGTHALISEPVQFNDLGLVITDEQHRFGVNQRKLLREKGNDANVLFMTATPIPRTLA EEEEECHHHHCCCCEECCEEEEEECCHHHCCCCHHHHHHHCCCCCEEEEEECCCCCCEEE ISVFGELDVSTIKQMPKGRKPIITEWAKHEEIEIVHDKTAREIRAGRQVYVICPLIEASQ EEEECCCCHHHHHHCCCCCCCCHHHHCCCCCEEEEECHHHHHHHCCCEEEEEEEECCCCC HLDVKNATEIYEAYQRLFGTDKVGLLHGKMKTEEKDEVMNKFQNHDFDVIVSTTVVEVGV CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEEEEECC NVPNATMIVIYDAERFGLSTLHQLRGRVGRSSYQSYCILVGNPESETGIERLQIMTQTTD CCCCCEEEEEECCHHCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHEEEEECCC GFVLSEKDLEMRGPGDFFGIKQSGLPDFKVANIVEDYRMLEVARDEASELILSGAIEQPE CEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH LRALKMRLDADLAVHQLD HHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9257758 [H]