| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
Click here to switch to the map view.
The map label for this gene is 222151061
Identifier: 222151061
GI number: 222151061
Start: 883837
End: 884487
Strand: Direct
Name: 222151061
Synonym: MCCL_0812
Alternate gene names: NA
Gene position: 883837-884487 (Clockwise)
Preceding gene: 222151060
Following gene: 222151062
Centisome position: 42.04
GC content: 38.56
Gene sequence:
>651_bases ATGAGAGTTATCGTAAGATTGATGGGAGTTCTATGTATCATAGCAGCGATTACGATGTTTTTCTGGCAGGATATTCGTGC GTATTTCACGCATTCAGTCAACGAAAAGATAATACAGTCGTATGAGAAGAATGATGATAAAGTAAATGTTAATGGTTTTG AAAAATGGATCACTAAAACTGAACCTGAAAAATTAAAGCTTAAAGACAATATGATCGGCTACTTAAAAGTGCCGGCTGCG GACATAAACGAGCCGCTATATAAAGGACCGGCAACTCAGGAAGCGATGAAAAATGGTGTCGTACTCGTAGATAAAGATGA AAAGATAACGGAACAGAATGTTGCGATTGCGGGTCATCGTGTAGAAGGTGCAGGGATTCGTTTCAACTATCTGGACCGTG CAAAAGTTGGTGATACCGTTGAATTATTATCGAGAAGCGGCAAAAATGTTTATAAGATTACAAAGATCTATGATGTGCAA CCGACTGAAGTCGGTGTACTAGATGAAAAGCCTGGAAATCCACAGGAACTTACCTTGATAACGTGTAACGATTATAACCC AGATACTTTAATGTTTGAGAAGCGAATGATCGTTAAAGCGCAGATAATTGAAAGAAATGGTCAGAAAGTAGCGGTTCAAA AGTTAAGATAG
Upstream 100 bases:
>100_bases AATACTAAGTGGTGCAATCGAACAACCTGAATTACGCGCATTAAAGATGCGTCTAGATGCAGACCTTGCAGTACATCAAC TTGACTAAGAGGAGATTGAA
Downstream 100 bases:
>100_bases ATACGCTTATAAAACTAAATCTTTTTTGAAGCTCAGAGGAATAAGGCATATAAATGTCTTTTCCTTTTTTTGTTGCAGTG TGTTTATATTTTTGTTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: Sortase A; Sortase Protein; Sortase Family Protein; LPXTG Specific Sortase A; Sortase A-Type Family; Sortase SrtA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MRVIVRLMGVLCIIAAITMFFWQDIRAYFTHSVNEKIIQSYEKNDDKVNVNGFEKWITKTEPEKLKLKDNMIGYLKVPAA DINEPLYKGPATQEAMKNGVVLVDKDEKITEQNVAIAGHRVEGAGIRFNYLDRAKVGDTVELLSRSGKNVYKITKIYDVQ PTEVGVLDEKPGNPQELTLITCNDYNPDTLMFEKRMIVKAQIIERNGQKVAVQKLR
Sequences:
>Translated_216_residues MRVIVRLMGVLCIIAAITMFFWQDIRAYFTHSVNEKIIQSYEKNDDKVNVNGFEKWITKTEPEKLKLKDNMIGYLKVPAA DINEPLYKGPATQEAMKNGVVLVDKDEKITEQNVAIAGHRVEGAGIRFNYLDRAKVGDTVELLSRSGKNVYKITKIYDVQ PTEVGVLDEKPGNPQELTLITCNDYNPDTLMFEKRMIVKAQIIERNGQKVAVQKLR >Mature_216_residues MRVIVRLMGVLCIIAAITMFFWQDIRAYFTHSVNEKIIQSYEKNDDKVNVNGFEKWITKTEPEKLKLKDNMIGYLKVPAA DINEPLYKGPATQEAMKNGVVLVDKDEKITEQNVAIAGHRVEGAGIRFNYLDRAKVGDTVELLSRSGKNVYKITKIYDVQ PTEVGVLDEKPGNPQELTLITCNDYNPDTLMFEKRMIVKAQIIERNGQKVAVQKLR
Specific function: Unknown
COG id: COG3764
COG function: function code M; Sortase (surface protein transpeptidase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24606; Mature: 24606
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVIVRLMGVLCIIAAITMFFWQDIRAYFTHSVNEKIIQSYEKNDDKVNVNGFEKWITKT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCHHHHHHCCC EPEKLKLKDNMIGYLKVPAADINEPLYKGPATQEAMKNGVVLVDKDEKITEQNVAIAGHR CCCEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHCCEEEEECCCCCCCCCEEEECEE VEGAGIRFNYLDRAKVGDTVELLSRSGKNVYKITKIYDVQPTEVGVLDEKPGNPQELTLI ECCCCEEEECCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCCEEEEECCCCCCCCEEEEE TCNDYNPDTLMFEKRMIVKAQIIERNGQKVAVQKLR EECCCCCCEEEEHHHHHHHHHHHHCCCCEEEEEECC >Mature Secondary Structure MRVIVRLMGVLCIIAAITMFFWQDIRAYFTHSVNEKIIQSYEKNDDKVNVNGFEKWITKT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCHHHHHHCCC EPEKLKLKDNMIGYLKVPAADINEPLYKGPATQEAMKNGVVLVDKDEKITEQNVAIAGHR CCCEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHCCEEEEECCCCCCCCCEEEECEE VEGAGIRFNYLDRAKVGDTVELLSRSGKNVYKITKIYDVQPTEVGVLDEKPGNPQELTLI ECCCCEEEECCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCCEEEEECCCCCCCCEEEEE TCNDYNPDTLMFEKRMIVKAQIIERNGQKVAVQKLR EECCCCCCEEEEHHHHHHHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA