| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is tenA
Identifier: 222151036
GI number: 222151036
Start: 851856
End: 852581
Strand: Direct
Name: tenA
Synonym: MCCL_0787
Alternate gene names: NA
Gene position: 851856-852581 (Clockwise)
Preceding gene: 222151035
Following gene: 222151037
Centisome position: 40.52
GC content: 41.05
Gene sequence:
>726_bases ATGCCTATACCTACGTATAGGTATTTTTTATTAAAGAGGAGGAATAACATGTTTACTGAGCGCATATTAAAGCGTGTTGA ACCGATCTGGGCTTCATATCTGGAACATCCTTTCGTTAAGGGGCTAGGTGATGGTTCGCTTGAGAAGGAGAAGTTCCAGT TCTGGTTAAAACAAGATTATGTTTATTTAATTGATTATGCTAAATTAATGGCGATCGGGAGTGCGAAGGCACCTGACCTG CGTGTGATGGGCATATTCTCTAAACTGCTGCATGGTACATTATTTATGGAGATGGATTTACATCGCAGCTATGCGAAACA GTTCGGTATCTCTGAAAGTGAATTAGAAGAAACTGAAGCGGCATCAGTAAATACAGCGTATACAAGTTATATGCTGAATC ATGCACAGCGTGGTGGTGCTGAACATGTTACGGCATGTCTGCTTGCGTGCGCATGGAGTTATAACTATATCGGGAAACAT TTAGCGGAGCAGGATGGTGCATTAGATGATAATAATCCATACCGTGACTGGATTGAAACATATTCAGGGGAAGAGTTTAC GGAACTTACGAATGATGCAATTGCACTGATGGATGAGCTTGCTGAAGGTATGCCTGAGCGTATACTTGCAGATTTAGAGG AGATTATTGTTAAGACAAGCTACTATGAGTATATGTTCTGGGAGATGTGTGAATTTAAAGCGCATTGGGATATTCCAGTG AAGTAG
Upstream 100 bases:
>100_bases AAATAAAAATAAAAAATATCACTAGGGGTGCATTCGTGCTGAGAGGAGTAATCCGACCCTTTGAACCTGTTTGGTTTATA CCAGCGTAGGGAAGTGCTTA
Downstream 100 bases:
>100_bases GCTGTAATGTTAGAATAGTTAAAGTCAGAAGCTAAGTGGATACTTAGCTTCTGACTTTATTATTTGTTTAAAATAAAAAT TCATAAAAAGTGTAAAATGT
Product: transcriptional regulator of extracellular enzyme genes
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MPIPTYRYFLLKRRNNMFTERILKRVEPIWASYLEHPFVKGLGDGSLEKEKFQFWLKQDYVYLIDYAKLMAIGSAKAPDL RVMGIFSKLLHGTLFMEMDLHRSYAKQFGISESELEETEAASVNTAYTSYMLNHAQRGGAEHVTACLLACAWSYNYIGKH LAEQDGALDDNNPYRDWIETYSGEEFTELTNDAIALMDELAEGMPERILADLEEIIVKTSYYEYMFWEMCEFKAHWDIPV K
Sequences:
>Translated_241_residues MPIPTYRYFLLKRRNNMFTERILKRVEPIWASYLEHPFVKGLGDGSLEKEKFQFWLKQDYVYLIDYAKLMAIGSAKAPDL RVMGIFSKLLHGTLFMEMDLHRSYAKQFGISESELEETEAASVNTAYTSYMLNHAQRGGAEHVTACLLACAWSYNYIGKH LAEQDGALDDNNPYRDWIETYSGEEFTELTNDAIALMDELAEGMPERILADLEEIIVKTSYYEYMFWEMCEFKAHWDIPV K >Mature_240_residues PIPTYRYFLLKRRNNMFTERILKRVEPIWASYLEHPFVKGLGDGSLEKEKFQFWLKQDYVYLIDYAKLMAIGSAKAPDLR VMGIFSKLLHGTLFMEMDLHRSYAKQFGISESELEETEAASVNTAYTSYMLNHAQRGGAEHVTACLLACAWSYNYIGKHL AEQDGALDDNNPYRDWIETYSGEEFTELTNDAIALMDELAEGMPERILADLEEIIVKTSYYEYMFWEMCEFKAHWDIPVK
Specific function: Unknown
COG id: COG0819
COG function: function code K; Putative transcription activator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiaminase-2 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6324517, Length=207, Percent_Identity=31.4009661835749, Blast_Score=106, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6324997, Length=207, Percent_Identity=29.4685990338164, Blast_Score=97, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6325378, Length=205, Percent_Identity=27.3170731707317, Blast_Score=94, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016084 - InterPro: IPR004305 [H]
Pfam domain/function: PF03070 TENA_THI-4 [H]
EC number: NA
Molecular weight: Translated: 28086; Mature: 27955
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIPTYRYFLLKRRNNMFTERILKRVEPIWASYLEHPFVKGLGDGSLEKEKFQFWLKQDY CCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHCCH VYLIDYAKLMAIGSAKAPDLRVMGIFSKLLHGTLFMEMDLHRSYAKQFGISESELEETEA HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH ASVNTAYTSYMLNHAQRGGAEHVTACLLACAWSYNYIGKHLAEQDGALDDNNPYRDWIET HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH YSGEEFTELTNDAIALMDELAEGMPERILADLEEIIVKTSYYEYMFWEMCEFKAHWDIPV CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC K C >Mature Secondary Structure PIPTYRYFLLKRRNNMFTERILKRVEPIWASYLEHPFVKGLGDGSLEKEKFQFWLKQDY CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHCCH VYLIDYAKLMAIGSAKAPDLRVMGIFSKLLHGTLFMEMDLHRSYAKQFGISESELEETEA HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH ASVNTAYTSYMLNHAQRGGAEHVTACLLACAWSYNYIGKHLAEQDGALDDNNPYRDWIET HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH YSGEEFTELTNDAIALMDELAEGMPERILADLEEIIVKTSYYEYMFWEMCEFKAHWDIPV CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]