| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is glgP [H]
Identifier: 222151035
GI number: 222151035
Start: 849095
End: 851500
Strand: Direct
Name: glgP [H]
Synonym: MCCL_0786
Alternate gene names: 222151035
Gene position: 849095-851500 (Clockwise)
Preceding gene: 222151034
Following gene: 222151036
Centisome position: 40.39
GC content: 37.95
Gene sequence:
>2406_bases ATGAGAACATATACAAAATCAGAATTTCGTAAAGTATTAGAAACTAAGTTGATGAATAAACGTACTGCAACTTTGGAAGA GTCTACAGATATCGATATATTCTACGCAATATGCTCTATATTAAAAGATGAAATTAATCAGGCAGGAGTAGATACTAAAC GTCATAACATTGAAGCTAAAAGACGCCAGATTAACTATCTATCGATGGAATTTCTGATTGGAAGATTAATTGAAAGTAAC CTGTTGAATGCCGGACTATTAGATGTATGTAATGAAGTACTGACTGAGCTCGGTCGTGACCCTAAGAAAATTTATAGTGA AGAAAATGATGCTGGGTTAGGAAATGGTGGTCTTGGCAGACTTGCTGCGTGTTTCTTAGATTCTATCGCCTCTTTAGGAT ATATGGGTAATGGTTTTGGTATACGATATCGCTATGGATTATTCGAACAGCGTATCGTTAACGGTACACAGATTGAATTG CCAGATAACTGGTTACAGGAAGTATACCCTTGGGAAACAAGAAGAATTGAGGAAGCGGTATCGGTAAATTTTGGTGGTCA AGTCACTTCCACAGTTCTTGAAGACGGCAATCTTAAATTTACTTATAGTGATCAGGAGACGGTACTTGCAGTGCCATATG ATGTCGGCGTTGTAGGGTATGAGAATGATACTGTTAATCAGCTGCGTCTTTGGAGTGCTGAACTACCACATGACACGATA GATTATGGAGATTACAAGAATCGACTTGAGCATATGCAAAGTATAGAACGTATTTCAGGGTTCTTATATCCTGATGATTC AACTGAAGAAGGCCAATTCTTACGTCTCAAGCAACAATATTTCTTAGTATCCTCCACGATTCAAACGCTGATTAAACAAT TCAAAGAACGCTATCAGCTGCCTGTGGCACAATTTCATAAGTATCATTGTATTCAGATCAATGATACACATCCAACCTTT GGGATTCCGGAATTGATGCGTATTCTGATGGATGACGAAGGGCTCGGATGGGATGATGCATGGCACATAGTCACGCATAC ATTTGCCTATACGAACCATACAATCATGCAGGAAGCTTTAGAGAAATGGCCAGTATACCAAGTTCAGAACGTTAACCCGC GTATCTTTATGATTATTAATGAAATCAATGAACGTTTCTGCAAGGATGTATACGAAACACATCCAGAAATGCGTGATAGG ATTAGTGAGCTTGCAGTCATCAGCAACAATGTTGTTCATATGAGCAAGCTTGCTATTGTCGGTTCTTTCAGTGTGAATGG TGTTGCTGCACTTCATTCGGAAATTATTAAAGATCATACATTTAATGATTTCTATAAACTGACACCAGAGAAATTTAATA ATAAGACGAACGGTATAACCCATAGAAGATGGCTGATGACCTCTAACCCTGAGCTGTCACATCTAATCAGTGATGCAATA GGTGATAACTGGGTGAAACATCCTCAGGAATTAACGCAGTTGATGCATTATTATAATGACGATGCTTTCCTGGATCGATT AGCTGAAGTGAAGCTGCATAATAAAAAAATACTTAAAGAGGTCATCTACAACAAGACAGGCATTGAAGTAGACGAACATT CAGTATTTGATGTGCAAGTAAAGAGATTGCATGAGTATAAGCGACAGTTATTGAACTTACTGCATATCATCTATCTCTAT AATGAAATAAAACGTAAACCGTCTATAAAAATACAACCGAGAACGTTTATCTTTGGTGCCAAAGCAGCACCAGGCTATCA CATTGCGAAAGAAGTTATCAAACTGATTCATGCTGTTGCAAATGTAGTTAATAATGATACAGATGTTGATAATAGAATTA AAGTTGTATTTCTAGAAAACTACAATGTGACATTAGCTGAAGATATTATGCCAGCAGCAGAAATATCAGAACAGATATCA ACTGCATCGATGGAAGCATCAGGGACAGGTAATATGAAGATGATGATGAATGGTGCGATTACACTGGGGACGATGGACGG AGCGAATGTTGAAATCGCTGAGCTTGTAGGTAAAGAGAATATCTTTATCTTTGGTTTAAGTTCTGAAGAAGTCATTAATT ATCAGTTAAATGGTGGTTACCGAGCAGAGGACATCTATAAGACAGATTCACGTGTGAAAACCGCGATGGACGCGCTCATC AATGAACAGTTCGGCAGAAACTATGCATTTAATGACCTATACTACCATGTACTGACAAACAATGATCCATACTTCCTGCT TAAAGACTTTAATTCCTATATTAATATTCACCTCACTGCGATGGCAACGTATCAGGATAAGAGGCAATGGAATCAGATGA GCTTGATGAATATAATGAAGTCGGGTCAATTCTCTAGTGACCGAACGATACAGCAATATGCGACGGATATTTGGAAGTTA GATTAA
Upstream 100 bases:
>100_bases GAAAACAAATATAAAGCACTGATTAAGAACATCACAAAAGTGAACCATAGCTGGGATGCTTCAGCGCGAAAATACTTAGA TATCTATTAAGGAGACTTTA
Downstream 100 bases:
>100_bases TCAAGAGCTGAGACGATTAAGTCTCAGTTTTTTTATTCTGGATTTTAAACTGTTTTATAATATGTATAACAAAAGGGGCT GCTTACAATATATGGGTACC
Product: glycogen phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 801; Mature: 801
Protein sequence:
>801_residues MRTYTKSEFRKVLETKLMNKRTATLEESTDIDIFYAICSILKDEINQAGVDTKRHNIEAKRRQINYLSMEFLIGRLIESN LLNAGLLDVCNEVLTELGRDPKKIYSEENDAGLGNGGLGRLAACFLDSIASLGYMGNGFGIRYRYGLFEQRIVNGTQIEL PDNWLQEVYPWETRRIEEAVSVNFGGQVTSTVLEDGNLKFTYSDQETVLAVPYDVGVVGYENDTVNQLRLWSAELPHDTI DYGDYKNRLEHMQSIERISGFLYPDDSTEEGQFLRLKQQYFLVSSTIQTLIKQFKERYQLPVAQFHKYHCIQINDTHPTF GIPELMRILMDDEGLGWDDAWHIVTHTFAYTNHTIMQEALEKWPVYQVQNVNPRIFMIINEINERFCKDVYETHPEMRDR ISELAVISNNVVHMSKLAIVGSFSVNGVAALHSEIIKDHTFNDFYKLTPEKFNNKTNGITHRRWLMTSNPELSHLISDAI GDNWVKHPQELTQLMHYYNDDAFLDRLAEVKLHNKKILKEVIYNKTGIEVDEHSVFDVQVKRLHEYKRQLLNLLHIIYLY NEIKRKPSIKIQPRTFIFGAKAAPGYHIAKEVIKLIHAVANVVNNDTDVDNRIKVVFLENYNVTLAEDIMPAAEISEQIS TASMEASGTGNMKMMMNGAITLGTMDGANVEIAELVGKENIFIFGLSSEEVINYQLNGGYRAEDIYKTDSRVKTAMDALI NEQFGRNYAFNDLYYHVLTNNDPYFLLKDFNSYINIHLTAMATYQDKRQWNQMSLMNIMKSGQFSSDRTIQQYATDIWKL D
Sequences:
>Translated_801_residues MRTYTKSEFRKVLETKLMNKRTATLEESTDIDIFYAICSILKDEINQAGVDTKRHNIEAKRRQINYLSMEFLIGRLIESN LLNAGLLDVCNEVLTELGRDPKKIYSEENDAGLGNGGLGRLAACFLDSIASLGYMGNGFGIRYRYGLFEQRIVNGTQIEL PDNWLQEVYPWETRRIEEAVSVNFGGQVTSTVLEDGNLKFTYSDQETVLAVPYDVGVVGYENDTVNQLRLWSAELPHDTI DYGDYKNRLEHMQSIERISGFLYPDDSTEEGQFLRLKQQYFLVSSTIQTLIKQFKERYQLPVAQFHKYHCIQINDTHPTF GIPELMRILMDDEGLGWDDAWHIVTHTFAYTNHTIMQEALEKWPVYQVQNVNPRIFMIINEINERFCKDVYETHPEMRDR ISELAVISNNVVHMSKLAIVGSFSVNGVAALHSEIIKDHTFNDFYKLTPEKFNNKTNGITHRRWLMTSNPELSHLISDAI GDNWVKHPQELTQLMHYYNDDAFLDRLAEVKLHNKKILKEVIYNKTGIEVDEHSVFDVQVKRLHEYKRQLLNLLHIIYLY NEIKRKPSIKIQPRTFIFGAKAAPGYHIAKEVIKLIHAVANVVNNDTDVDNRIKVVFLENYNVTLAEDIMPAAEISEQIS TASMEASGTGNMKMMMNGAITLGTMDGANVEIAELVGKENIFIFGLSSEEVINYQLNGGYRAEDIYKTDSRVKTAMDALI NEQFGRNYAFNDLYYHVLTNNDPYFLLKDFNSYINIHLTAMATYQDKRQWNQMSLMNIMKSGQFSSDRTIQQYATDIWKL D >Mature_801_residues MRTYTKSEFRKVLETKLMNKRTATLEESTDIDIFYAICSILKDEINQAGVDTKRHNIEAKRRQINYLSMEFLIGRLIESN LLNAGLLDVCNEVLTELGRDPKKIYSEENDAGLGNGGLGRLAACFLDSIASLGYMGNGFGIRYRYGLFEQRIVNGTQIEL PDNWLQEVYPWETRRIEEAVSVNFGGQVTSTVLEDGNLKFTYSDQETVLAVPYDVGVVGYENDTVNQLRLWSAELPHDTI DYGDYKNRLEHMQSIERISGFLYPDDSTEEGQFLRLKQQYFLVSSTIQTLIKQFKERYQLPVAQFHKYHCIQINDTHPTF GIPELMRILMDDEGLGWDDAWHIVTHTFAYTNHTIMQEALEKWPVYQVQNVNPRIFMIINEINERFCKDVYETHPEMRDR ISELAVISNNVVHMSKLAIVGSFSVNGVAALHSEIIKDHTFNDFYKLTPEKFNNKTNGITHRRWLMTSNPELSHLISDAI GDNWVKHPQELTQLMHYYNDDAFLDRLAEVKLHNKKILKEVIYNKTGIEVDEHSVFDVQVKRLHEYKRQLLNLLHIIYLY NEIKRKPSIKIQPRTFIFGAKAAPGYHIAKEVIKLIHAVANVVNNDTDVDNRIKVVFLENYNVTLAEDIMPAAEISEQIS TASMEASGTGNMKMMMNGAITLGTMDGANVEIAELVGKENIFIFGLSSEEVINYQLNGGYRAEDIYKTDSRVKTAMDALI NEQFGRNYAFNDLYYHVLTNNDPYFLLKDFNSYINIHLTAMATYQDKRQWNQMSLMNIMKSGQFSSDRTIQQYATDIWKL D
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI71037379, Length=816, Percent_Identity=44.6078431372549, Blast_Score=665, Evalue=0.0, Organism=Homo sapiens, GI5032009, Length=815, Percent_Identity=43.9263803680982, Blast_Score=660, Evalue=0.0, Organism=Homo sapiens, GI21361370, Length=813, Percent_Identity=44.280442804428, Blast_Score=650, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=700, Percent_Identity=46.4285714285714, Blast_Score=626, Evalue=1e-179, Organism=Homo sapiens, GI257900462, Length=668, Percent_Identity=44.7604790419162, Blast_Score=575, Evalue=1e-164, Organism=Escherichia coli, GI48994936, Length=751, Percent_Identity=44.0745672436751, Blast_Score=639, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=785, Percent_Identity=42.6751592356688, Blast_Score=597, Evalue=1e-171, Organism=Caenorhabditis elegans, GI17564550, Length=815, Percent_Identity=45.1533742331288, Blast_Score=686, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=815, Percent_Identity=45.1533742331288, Blast_Score=685, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=787, Percent_Identity=42.8208386277001, Blast_Score=557, Evalue=1e-159, Organism=Drosophila melanogaster, GI78706832, Length=815, Percent_Identity=45.8895705521472, Blast_Score=684, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=815, Percent_Identity=45.8895705521472, Blast_Score=684, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 92393; Mature: 92393
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTYTKSEFRKVLETKLMNKRTATLEESTDIDIFYAICSILKDEINQAGVDTKRHNIEAK CCCCCHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCHHHH RRQINYLSMEFLIGRLIESNLLNAGLLDVCNEVLTELGRDPKKIYSEENDAGLGNGGLGR HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHH LAACFLDSIASLGYMGNGFGIRYRYGLFEQRIVNGTQIELPDNWLQEVYPWETRRIEEAV HHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCCCEEECCHHHHHHHCCCHHHHHHHHH SVNFGGQVTSTVLEDGNLKFTYSDQETVLAVPYDVGVVGYENDTVNQLRLWSAELPHDTI CCCCCCCHHHHHHCCCCEEEEECCCCEEEEEEEECEEEECCCCCCCHHEEEECCCCCCCC DYGDYKNRLEHMQSIERISGFLYPDDSTEEGQFLRLKQQYFLVSSTIQTLIKQFKERYQL CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHCC PVAQFHKYHCIQINDTHPTFGIPELMRILMDDEGLGWDDAWHIVTHTFAYTNHTIMQEAL CHHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHH EKWPVYQVQNVNPRIFMIINEINERFCKDVYETHPEMRDRISELAVISNNVVHMSKLAIV HHCCCEEEECCCCEEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEHEEEE GSFSVNGVAALHSEIIKDHTFNDFYKLTPEKFNNKTNGITHRRWLMTSNPELSHLISDAI ECCCCCHHHHHHHHHHHCCCCCHHHCCCCHHHCCCCCCCEEEEEEEECCCHHHHHHHHHH GDNWVKHPQELTQLMHYYNDDAFLDRLAEVKLHNKKILKEVIYNKTGIEVDEHSVFDVQV CCHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH KRLHEYKRQLLNLLHIIYLYNEIKRKPSIKIQPRTFIFGAKAAPGYHIAKEVIKLIHAVA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEECCCCCCHHHHHHHHHHHHHHH NVVNNDTDVDNRIKVVFLENYNVTLAEDIMPAAEISEQISTASMEASGTGNMKMMMNGAI HHHCCCCCCCCCEEEEEEECCCEEEHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCE TLGTMDGANVEIAELVGKENIFIFGLSSEEVINYQLNGGYRAEDIYKTDSRVKTAMDALI EEEECCCCCEEHHHHHCCCCEEEEECCCCCEEEEEECCCEECCHHHCCHHHHHHHHHHHH NEQFGRNYAFNDLYYHVLTNNDPYFLLKDFNSYINIHLTAMATYQDKRQWNQMSLMNIMK HHHHCCCCEECCEEEEEEECCCCEEEEEECCCEEEEEEEEEEEHHHHHHHHHHHHHHHHH SGQFSSDRTIQQYATDIWKLD CCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MRTYTKSEFRKVLETKLMNKRTATLEESTDIDIFYAICSILKDEINQAGVDTKRHNIEAK CCCCCHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCHHHH RRQINYLSMEFLIGRLIESNLLNAGLLDVCNEVLTELGRDPKKIYSEENDAGLGNGGLGR HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHH LAACFLDSIASLGYMGNGFGIRYRYGLFEQRIVNGTQIELPDNWLQEVYPWETRRIEEAV HHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCCCEEECCHHHHHHHCCCHHHHHHHHH SVNFGGQVTSTVLEDGNLKFTYSDQETVLAVPYDVGVVGYENDTVNQLRLWSAELPHDTI CCCCCCCHHHHHHCCCCEEEEECCCCEEEEEEEECEEEECCCCCCCHHEEEECCCCCCCC DYGDYKNRLEHMQSIERISGFLYPDDSTEEGQFLRLKQQYFLVSSTIQTLIKQFKERYQL CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHCC PVAQFHKYHCIQINDTHPTFGIPELMRILMDDEGLGWDDAWHIVTHTFAYTNHTIMQEAL CHHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHH EKWPVYQVQNVNPRIFMIINEINERFCKDVYETHPEMRDRISELAVISNNVVHMSKLAIV HHCCCEEEECCCCEEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEHEEEE GSFSVNGVAALHSEIIKDHTFNDFYKLTPEKFNNKTNGITHRRWLMTSNPELSHLISDAI ECCCCCHHHHHHHHHHHCCCCCHHHCCCCHHHCCCCCCCEEEEEEEECCCHHHHHHHHHH GDNWVKHPQELTQLMHYYNDDAFLDRLAEVKLHNKKILKEVIYNKTGIEVDEHSVFDVQV CCHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH KRLHEYKRQLLNLLHIIYLYNEIKRKPSIKIQPRTFIFGAKAAPGYHIAKEVIKLIHAVA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEECCCCCCHHHHHHHHHHHHHHH NVVNNDTDVDNRIKVVFLENYNVTLAEDIMPAAEISEQISTASMEASGTGNMKMMMNGAI HHHCCCCCCCCCEEEEEEECCCEEEHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCE TLGTMDGANVEIAELVGKENIFIFGLSSEEVINYQLNGGYRAEDIYKTDSRVKTAMDALI EEEECCCCCEEHHHHHCCCCEEEEECCCCCEEEEEECCCEECCHHHCCHHHHHHHHHHHH NEQFGRNYAFNDLYYHVLTNNDPYFLLKDFNSYINIHLTAMATYQDKRQWNQMSLMNIMK HHHHCCCCEECCEEEEEEECCCCEEEEEECCCEEEEEEEEEEEHHHHHHHHHHHHHHHHH SGQFSSDRTIQQYATDIWKLD CCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8145641; 9387221; 9384377 [H]