| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is icaC [H]
Identifier: 222150932
GI number: 222150932
Start: 734838
End: 735869
Strand: Direct
Name: icaC [H]
Synonym: MCCL_0682
Alternate gene names: 222150932
Gene position: 734838-735869 (Clockwise)
Preceding gene: 222150931
Following gene: 222150934
Centisome position: 34.95
GC content: 45.25
Gene sequence:
>1032_bases ATGAAAAAATATAGACTGGAACTGAACTATGTAAGGGTGATCCTGTGCGTGATGATCGTCGTTACGCACGTCCTGACGGA GTATACGAACGCCCATAGTAACAATGCAGCACAGCTTGAGACGCTGTACTGGATTAGGATGCTGCTCATCTTCGGAACGC CGGGGTTTCTGATGCTCACGCAGCTGATCTTCACCCTGAACCTGCAAGGCTTACCGGACAACTACTTGAGACGCCGTCTG CAGTATGTCTTCATCCCGTATATCGTGATGGGGGCCTTCTACAGCTATAGTGAGGCTATATATCTGCATAAACCGTTTAT CACGCAGTTTGTCGAGAACGTATTGAGAGGACAGTGGTACGGCTACTTTATTCTGATCATCCTGAAGTTCTTCATCCTGA ACGTAGTGATTATGAAACTGTGGCCGAAACTGCTCTCATCGCGTACTGCAGTCGTTATCGCCATCCTCATCAATATCGTC TATCTGTATGTTTATCATCATAATACTGTGGTGAGCGACTGGATTGATAATACGTATTTCTTTGAAGCAAATACGGTGCT GCTCGGCTGGATCGGCTATTATTTCGTCGGTTCATATCTTGGCAGTCATTATGAGCGATTGAAAGCTTACTTTGAAGATT ACGGATTATTCTTTATCGGTATCACTTTACTTGCGTTTATACTGTTCATCATGACCGGGGATCATGACTTTGCTGGTGTG ACGAGCAATAACGAATATATCATGCTGTATTGTATCAGTGCATTCTTCTGCATCATCCACTTCAGTATCAAGGTTCAGGG GATGCTGCTGGAAGCTGTGACGCTCATCAGTACGTATTCGTTCTTTATCTACCTGTTCCATCCAATCATACTGCAGTATG TGTATGCCTACACAGAACGCTTTGAAGGGAGCACGCTGCTATTCATGCTGTTCTCTGTGCTGCTGACGTTCGGCGCATGC ACCGGTGTCGGTAGTCTGCTGAGAACGTTCAACATCTTCAAGTATGTGATGGGGACACAACCTTATAGATAA
Upstream 100 bases:
>100_bases CCGATCCATGTTGATGATGATAATTACACGCTGCCACGTATCCTGGTGAGCAGAGATTCATTTGAGAAAGTCGTAAAAAA CTGGAAAGGTTTTAATTGAT
Downstream 100 bases:
>100_bases CAAAAGGACTCAAACGTTTTGAGTCCTTTTGTTATGCAGTATATCATTAAGTGTATAGCTATCCAGCACTGAAAGATAGG CGCCTAGCGCTTCGCTAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: PGA export protein; Poly-beta-1,6-GlcNAc export protein; Biofilm polysaccharide intercellular adhesin export protein; Biofilm PIA export protein; Intercellular adhesion protein C [H]
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MKKYRLELNYVRVILCVMIVVTHVLTEYTNAHSNNAAQLETLYWIRMLLIFGTPGFLMLTQLIFTLNLQGLPDNYLRRRL QYVFIPYIVMGAFYSYSEAIYLHKPFITQFVENVLRGQWYGYFILIILKFFILNVVIMKLWPKLLSSRTAVVIAILINIV YLYVYHHNTVVSDWIDNTYFFEANTVLLGWIGYYFVGSYLGSHYERLKAYFEDYGLFFIGITLLAFILFIMTGDHDFAGV TSNNEYIMLYCISAFFCIIHFSIKVQGMLLEAVTLISTYSFFIYLFHPIILQYVYAYTERFEGSTLLFMLFSVLLTFGAC TGVGSLLRTFNIFKYVMGTQPYR
Sequences:
>Translated_343_residues MKKYRLELNYVRVILCVMIVVTHVLTEYTNAHSNNAAQLETLYWIRMLLIFGTPGFLMLTQLIFTLNLQGLPDNYLRRRL QYVFIPYIVMGAFYSYSEAIYLHKPFITQFVENVLRGQWYGYFILIILKFFILNVVIMKLWPKLLSSRTAVVIAILINIV YLYVYHHNTVVSDWIDNTYFFEANTVLLGWIGYYFVGSYLGSHYERLKAYFEDYGLFFIGITLLAFILFIMTGDHDFAGV TSNNEYIMLYCISAFFCIIHFSIKVQGMLLEAVTLISTYSFFIYLFHPIILQYVYAYTERFEGSTLLFMLFSVLLTFGAC TGVGSLLRTFNIFKYVMGTQPYR >Mature_343_residues MKKYRLELNYVRVILCVMIVVTHVLTEYTNAHSNNAAQLETLYWIRMLLIFGTPGFLMLTQLIFTLNLQGLPDNYLRRRL QYVFIPYIVMGAFYSYSEAIYLHKPFITQFVENVLRGQWYGYFILIILKFFILNVVIMKLWPKLLSSRTAVVIAILINIV YLYVYHHNTVVSDWIDNTYFFEANTVLLGWIGYYFVGSYLGSHYERLKAYFEDYGLFFIGITLLAFILFIMTGDHDFAGV TSNNEYIMLYCISAFFCIIHFSIKVQGMLLEAVTLISTYSFFIYLFHPIILQYVYAYTERFEGSTLLFMLFSVLLTFGAC TGVGSLLRTFNIFKYVMGTQPYR
Specific function: Presumably involved in the export of the biofilm adhesin polysaccharide poly-beta-1,6-N-acetyl-D-glucosamine (PNAG, also referred to as PIA) across the cell membrane [H]
COG id: COG3936
COG function: function code G; Protein involved in polysaccharide intercellular adhesin (PIA) synthesis/biofilm formation
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002656 [H]
Pfam domain/function: PF01757 Acyl_transf_3 [H]
EC number: NA
Molecular weight: Translated: 40241; Mature: 40241
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYRLELNYVRVILCVMIVVTHVLTEYTNAHSNNAAQLETLYWIRMLLIFGTPGFLMLT CCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH QLIFTLNLQGLPDNYLRRRLQYVFIPYIVMGAFYSYSEAIYLHKPFITQFVENVLRGQWY HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCHH GYFILIILKFFILNVVIMKLWPKLLSSRTAVVIAILINIVYLYVYHHNTVVSDWIDNTYF HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEE FEANTVLLGWIGYYFVGSYLGSHYERLKAYFEDYGLFFIGITLLAFILFIMTGDHDFAGV EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC TSNNEYIMLYCISAFFCIIHFSIKVQGMLLEAVTLISTYSFFIYLFHPIILQYVYAYTER CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEGSTLLFMLFSVLLTFGACTGVGSLLRTFNIFKYVMGTQPYR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKKYRLELNYVRVILCVMIVVTHVLTEYTNAHSNNAAQLETLYWIRMLLIFGTPGFLMLT CCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH QLIFTLNLQGLPDNYLRRRLQYVFIPYIVMGAFYSYSEAIYLHKPFITQFVENVLRGQWY HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCHH GYFILIILKFFILNVVIMKLWPKLLSSRTAVVIAILINIVYLYVYHHNTVVSDWIDNTYF HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEE FEANTVLLGWIGYYFVGSYLGSHYERLKAYFEDYGLFFIGITLLAFILFIMTGDHDFAGV EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC TSNNEYIMLYCISAFFCIIHFSIKVQGMLLEAVTLISTYSFFIYLFHPIILQYVYAYTER CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEGSTLLFMLFSVLLTFGACTGVGSLLRTFNIFKYVMGTQPYR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA