Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

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The map label for this gene is capM [H]

Identifier: 222150926

GI number: 222150926

Start: 729642

End: 730793

Strand: Direct

Name: capM [H]

Synonym: MCCL_0676

Alternate gene names: 222150926

Gene position: 729642-730793 (Clockwise)

Preceding gene: 222150925

Following gene: 222150927

Centisome position: 34.71

GC content: 28.56

Gene sequence:

>1152_bases
ATGAAAATTATACAACTTTCTGCAATTGATATGACAATGAACAATTTTTTGAGACCATTAAATATTGCTACTCGTGATGC
TGGTTTTGAAGTACATTGTGTATGCTCAAGTGGACCATTTACAAAAGAAATAATTCAAGACAACTTTTATTATTATGACG
TAAAAATTGATAGAAAGATTAGTTTTTTATCTAATTTAAAGACAATTAGACAATTGACAGCTTTATTTAGAGATGTTAAA
CCTGATATCGTTCACGTACATACACCTGTTGCGTCTGTTCTTGGGAGAATTGCTGCAAAAATTGCTGGAGTTCCAACAAT
AATTTATACAGCTCATGGTTTTTATTTTCATGAAGGTATGTCTGATAAACAATATAAACTTTTCTTTAACATAGAGAAAT
ACATTGGACGCTATTTTACAGACTATATTTTTACACAAAGTCAGGAAGATTATGAAATTGCTAAAAAAAATAAATTTTTG
ACTAAGGATAAATCTAATAATTATGTTTGTATTAGCAATGGTATAGATTTAAAAAATAAATTTAATTATCAAAAATATGA
TAGACATATTAAAAAAGATATTCATGATAAGCATAAAATCCCGTATGAAAATCTGGTAATAACTTTCATAGGCAGATTAG
TAAAAGAAAAAGGAATTCTAGATTTATTGAAGGCATTCAATACTTTAAATAACAATGAAATTACTTTGGTAATTATTGGT
GGATTACCTCAGGGCGAGAGAGATACAGCTACCTATGAAGAAATTCAAAAATTTAAAACTCATCCTAATATAATCTTTAC
TGGTCATGTTAGTAATACTGAAGAATATTTATACTCTAGTGATATTTTTTGTTTGCCATCTTATAGAGAAGGAATGCCTA
GATCTATAATTGAAGCAATGTCTATGCATAATGCTGTTTTAGCAACTAACATTCGAGGATGTAGAGAAGAAGTAGTTCAA
GATGAAACAGGTTTACTCTTCGATGTTAATAACTATGAGCAAATCGCGAATAGTATTGATTATCTGTTTCAGAATAGAGA
CGTTCTATCACAAATGAAACAAAAAGGTTACGAGAGAGCAAAAGAATTATATGATGAAGAAAAAGTAGTAGCAACACAGA
TAGATATATTCAAAAAAGTAACTAGGGGATGA

Upstream 100 bases:

>100_bases
TATCGAATAATGGGATTGTATTTGATATTAAAGGTATTATTAATAAAGAAGATACCTCAAATAACCAAACAATTTGGAGT
TTATAATAAAAGGAGCTTTT

Downstream 100 bases:

>100_bases
GAAAATGAAATTGCTAATTACTGGAGCTACAGGACATTCAGGATTATTTTTTTTAGAACATTTAAATAACAATTCACAAA
AAATTTCAGAAGTTATTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MKIIQLSAIDMTMNNFLRPLNIATRDAGFEVHCVCSSGPFTKEIIQDNFYYYDVKIDRKISFLSNLKTIRQLTALFRDVK
PDIVHVHTPVASVLGRIAAKIAGVPTIIYTAHGFYFHEGMSDKQYKLFFNIEKYIGRYFTDYIFTQSQEDYEIAKKNKFL
TKDKSNNYVCISNGIDLKNKFNYQKYDRHIKKDIHDKHKIPYENLVITFIGRLVKEKGILDLLKAFNTLNNNEITLVIIG
GLPQGERDTATYEEIQKFKTHPNIIFTGHVSNTEEYLYSSDIFCLPSYREGMPRSIIEAMSMHNAVLATNIRGCREEVVQ
DETGLLFDVNNYEQIANSIDYLFQNRDVLSQMKQKGYERAKELYDEEKVVATQIDIFKKVTRG

Sequences:

>Translated_383_residues
MKIIQLSAIDMTMNNFLRPLNIATRDAGFEVHCVCSSGPFTKEIIQDNFYYYDVKIDRKISFLSNLKTIRQLTALFRDVK
PDIVHVHTPVASVLGRIAAKIAGVPTIIYTAHGFYFHEGMSDKQYKLFFNIEKYIGRYFTDYIFTQSQEDYEIAKKNKFL
TKDKSNNYVCISNGIDLKNKFNYQKYDRHIKKDIHDKHKIPYENLVITFIGRLVKEKGILDLLKAFNTLNNNEITLVIIG
GLPQGERDTATYEEIQKFKTHPNIIFTGHVSNTEEYLYSSDIFCLPSYREGMPRSIIEAMSMHNAVLATNIRGCREEVVQ
DETGLLFDVNNYEQIANSIDYLFQNRDVLSQMKQKGYERAKELYDEEKVVATQIDIFKKVTRG
>Mature_383_residues
MKIIQLSAIDMTMNNFLRPLNIATRDAGFEVHCVCSSGPFTKEIIQDNFYYYDVKIDRKISFLSNLKTIRQLTALFRDVK
PDIVHVHTPVASVLGRIAAKIAGVPTIIYTAHGFYFHEGMSDKQYKLFFNIEKYIGRYFTDYIFTQSQEDYEIAKKNKFL
TKDKSNNYVCISNGIDLKNKFNYQKYDRHIKKDIHDKHKIPYENLVITFIGRLVKEKGILDLLKAFNTLNNNEITLVIIG
GLPQGERDTATYEEIQKFKTHPNIIFTGHVSNTEEYLYSSDIFCLPSYREGMPRSIIEAMSMHNAVLATNIRGCREEVVQ
DETGLLFDVNNYEQIANSIDYLFQNRDVLSQMKQKGYERAKELYDEEKVVATQIDIFKKVTRG

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 44431; Mature: 44431

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIQLSAIDMTMNNFLRPLNIATRDAGFEVHCVCSSGPFTKEIIQDNFYYYDVKIDRKI
CEEEEEEHHHHHHHHCCCCCCCEECCCCCEEEEEECCCCCHHHHHHCCCEEEEEEECCHH
SFLSNLKTIRQLTALFRDVKPDIVHVHTPVASVLGRIAAKIAGVPTIIYTAHGFYFHEGM
HHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEEECCEEEECCC
SDKQYKLFFNIEKYIGRYFTDYIFTQSQEDYEIAKKNKFLTKDKSNNYVCISNGIDLKNK
CCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCC
FNYQKYDRHIKKDIHDKHKIPYENLVITFIGRLVKEKGILDLLKAFNTLNNNEITLVIIG
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEC
GLPQGERDTATYEEIQKFKTHPNIIFTGHVSNTEEYLYSSDIFCLPSYREGMPRSIIEAM
CCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCEEECCCHHCCCCHHHHHHH
SMHNAVLATNIRGCREEVVQDETGLLFDVNNYEQIANSIDYLFQNRDVLSQMKQKGYERA
HHCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
KELYDEEKVVATQIDIFKKVTRG
HHHHCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIIQLSAIDMTMNNFLRPLNIATRDAGFEVHCVCSSGPFTKEIIQDNFYYYDVKIDRKI
CEEEEEEHHHHHHHHCCCCCCCEECCCCCEEEEEECCCCCHHHHHHCCCEEEEEEECCHH
SFLSNLKTIRQLTALFRDVKPDIVHVHTPVASVLGRIAAKIAGVPTIIYTAHGFYFHEGM
HHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEEECCEEEECCC
SDKQYKLFFNIEKYIGRYFTDYIFTQSQEDYEIAKKNKFLTKDKSNNYVCISNGIDLKNK
CCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCC
FNYQKYDRHIKKDIHDKHKIPYENLVITFIGRLVKEKGILDLLKAFNTLNNNEITLVIIG
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEC
GLPQGERDTATYEEIQKFKTHPNIIFTGHVSNTEEYLYSSDIFCLPSYREGMPRSIIEAM
CCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCEEECCCHHCCCCHHHHHHH
SMHNAVLATNIRGCREEVVQDETGLLFDVNNYEQIANSIDYLFQNRDVLSQMKQKGYERA
HHCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
KELYDEEKVVATQIDIFKKVTRG
HHHHCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961465 [H]