| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is capM [H]
Identifier: 222150926
GI number: 222150926
Start: 729642
End: 730793
Strand: Direct
Name: capM [H]
Synonym: MCCL_0676
Alternate gene names: 222150926
Gene position: 729642-730793 (Clockwise)
Preceding gene: 222150925
Following gene: 222150927
Centisome position: 34.71
GC content: 28.56
Gene sequence:
>1152_bases ATGAAAATTATACAACTTTCTGCAATTGATATGACAATGAACAATTTTTTGAGACCATTAAATATTGCTACTCGTGATGC TGGTTTTGAAGTACATTGTGTATGCTCAAGTGGACCATTTACAAAAGAAATAATTCAAGACAACTTTTATTATTATGACG TAAAAATTGATAGAAAGATTAGTTTTTTATCTAATTTAAAGACAATTAGACAATTGACAGCTTTATTTAGAGATGTTAAA CCTGATATCGTTCACGTACATACACCTGTTGCGTCTGTTCTTGGGAGAATTGCTGCAAAAATTGCTGGAGTTCCAACAAT AATTTATACAGCTCATGGTTTTTATTTTCATGAAGGTATGTCTGATAAACAATATAAACTTTTCTTTAACATAGAGAAAT ACATTGGACGCTATTTTACAGACTATATTTTTACACAAAGTCAGGAAGATTATGAAATTGCTAAAAAAAATAAATTTTTG ACTAAGGATAAATCTAATAATTATGTTTGTATTAGCAATGGTATAGATTTAAAAAATAAATTTAATTATCAAAAATATGA TAGACATATTAAAAAAGATATTCATGATAAGCATAAAATCCCGTATGAAAATCTGGTAATAACTTTCATAGGCAGATTAG TAAAAGAAAAAGGAATTCTAGATTTATTGAAGGCATTCAATACTTTAAATAACAATGAAATTACTTTGGTAATTATTGGT GGATTACCTCAGGGCGAGAGAGATACAGCTACCTATGAAGAAATTCAAAAATTTAAAACTCATCCTAATATAATCTTTAC TGGTCATGTTAGTAATACTGAAGAATATTTATACTCTAGTGATATTTTTTGTTTGCCATCTTATAGAGAAGGAATGCCTA GATCTATAATTGAAGCAATGTCTATGCATAATGCTGTTTTAGCAACTAACATTCGAGGATGTAGAGAAGAAGTAGTTCAA GATGAAACAGGTTTACTCTTCGATGTTAATAACTATGAGCAAATCGCGAATAGTATTGATTATCTGTTTCAGAATAGAGA CGTTCTATCACAAATGAAACAAAAAGGTTACGAGAGAGCAAAAGAATTATATGATGAAGAAAAAGTAGTAGCAACACAGA TAGATATATTCAAAAAAGTAACTAGGGGATGA
Upstream 100 bases:
>100_bases TATCGAATAATGGGATTGTATTTGATATTAAAGGTATTATTAATAAAGAAGATACCTCAAATAACCAAACAATTTGGAGT TTATAATAAAAGGAGCTTTT
Downstream 100 bases:
>100_bases GAAAATGAAATTGCTAATTACTGGAGCTACAGGACATTCAGGATTATTTTTTTTAGAACATTTAAATAACAATTCACAAA AAATTTCAGAAGTTATTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MKIIQLSAIDMTMNNFLRPLNIATRDAGFEVHCVCSSGPFTKEIIQDNFYYYDVKIDRKISFLSNLKTIRQLTALFRDVK PDIVHVHTPVASVLGRIAAKIAGVPTIIYTAHGFYFHEGMSDKQYKLFFNIEKYIGRYFTDYIFTQSQEDYEIAKKNKFL TKDKSNNYVCISNGIDLKNKFNYQKYDRHIKKDIHDKHKIPYENLVITFIGRLVKEKGILDLLKAFNTLNNNEITLVIIG GLPQGERDTATYEEIQKFKTHPNIIFTGHVSNTEEYLYSSDIFCLPSYREGMPRSIIEAMSMHNAVLATNIRGCREEVVQ DETGLLFDVNNYEQIANSIDYLFQNRDVLSQMKQKGYERAKELYDEEKVVATQIDIFKKVTRG
Sequences:
>Translated_383_residues MKIIQLSAIDMTMNNFLRPLNIATRDAGFEVHCVCSSGPFTKEIIQDNFYYYDVKIDRKISFLSNLKTIRQLTALFRDVK PDIVHVHTPVASVLGRIAAKIAGVPTIIYTAHGFYFHEGMSDKQYKLFFNIEKYIGRYFTDYIFTQSQEDYEIAKKNKFL TKDKSNNYVCISNGIDLKNKFNYQKYDRHIKKDIHDKHKIPYENLVITFIGRLVKEKGILDLLKAFNTLNNNEITLVIIG GLPQGERDTATYEEIQKFKTHPNIIFTGHVSNTEEYLYSSDIFCLPSYREGMPRSIIEAMSMHNAVLATNIRGCREEVVQ DETGLLFDVNNYEQIANSIDYLFQNRDVLSQMKQKGYERAKELYDEEKVVATQIDIFKKVTRG >Mature_383_residues MKIIQLSAIDMTMNNFLRPLNIATRDAGFEVHCVCSSGPFTKEIIQDNFYYYDVKIDRKISFLSNLKTIRQLTALFRDVK PDIVHVHTPVASVLGRIAAKIAGVPTIIYTAHGFYFHEGMSDKQYKLFFNIEKYIGRYFTDYIFTQSQEDYEIAKKNKFL TKDKSNNYVCISNGIDLKNKFNYQKYDRHIKKDIHDKHKIPYENLVITFIGRLVKEKGILDLLKAFNTLNNNEITLVIIG GLPQGERDTATYEEIQKFKTHPNIIFTGHVSNTEEYLYSSDIFCLPSYREGMPRSIIEAMSMHNAVLATNIRGCREEVVQ DETGLLFDVNNYEQIANSIDYLFQNRDVLSQMKQKGYERAKELYDEEKVVATQIDIFKKVTRG
Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 44431; Mature: 44431
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIQLSAIDMTMNNFLRPLNIATRDAGFEVHCVCSSGPFTKEIIQDNFYYYDVKIDRKI CEEEEEEHHHHHHHHCCCCCCCEECCCCCEEEEEECCCCCHHHHHHCCCEEEEEEECCHH SFLSNLKTIRQLTALFRDVKPDIVHVHTPVASVLGRIAAKIAGVPTIIYTAHGFYFHEGM HHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEEECCEEEECCC SDKQYKLFFNIEKYIGRYFTDYIFTQSQEDYEIAKKNKFLTKDKSNNYVCISNGIDLKNK CCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCC FNYQKYDRHIKKDIHDKHKIPYENLVITFIGRLVKEKGILDLLKAFNTLNNNEITLVIIG CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEC GLPQGERDTATYEEIQKFKTHPNIIFTGHVSNTEEYLYSSDIFCLPSYREGMPRSIIEAM CCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCEEECCCHHCCCCHHHHHHH SMHNAVLATNIRGCREEVVQDETGLLFDVNNYEQIANSIDYLFQNRDVLSQMKQKGYERA HHCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KELYDEEKVVATQIDIFKKVTRG HHHHCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKIIQLSAIDMTMNNFLRPLNIATRDAGFEVHCVCSSGPFTKEIIQDNFYYYDVKIDRKI CEEEEEEHHHHHHHHCCCCCCCEECCCCCEEEEEECCCCCHHHHHHCCCEEEEEEECCHH SFLSNLKTIRQLTALFRDVKPDIVHVHTPVASVLGRIAAKIAGVPTIIYTAHGFYFHEGM HHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEEECCEEEECCC SDKQYKLFFNIEKYIGRYFTDYIFTQSQEDYEIAKKNKFLTKDKSNNYVCISNGIDLKNK CCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCC FNYQKYDRHIKKDIHDKHKIPYENLVITFIGRLVKEKGILDLLKAFNTLNNNEITLVIIG CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEC GLPQGERDTATYEEIQKFKTHPNIIFTGHVSNTEEYLYSSDIFCLPSYREGMPRSIIEAM CCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCEEECCCHHCCCCHHHHHHH SMHNAVLATNIRGCREEVVQDETGLLFDVNNYEQIANSIDYLFQNRDVLSQMKQKGYERA HHCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KELYDEEKVVATQIDIFKKVTRG HHHHCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7961465 [H]