| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222150909
Identifier: 222150909
GI number: 222150909
Start: 710225
End: 711412
Strand: Direct
Name: 222150909
Synonym: MCCL_0659
Alternate gene names: NA
Gene position: 710225-711412 (Clockwise)
Preceding gene: 222150908
Following gene: 222150910
Centisome position: 33.78
GC content: 37.21
Gene sequence:
>1188_bases ATGAAAAGCATATTGCTCATCTCACAAAATTTCTATCCTGAAATCGGATCTGCAGCAAACCGTATGAAAAATATATTCAA TCATCTCGTAGATCATGGGTATGATGTCTATATCTTAACAACGCAGCCCTCTTACCCGAACGAGAAGATGTATAAAGATG AAAAATACTGGAATGATGAACGTTTAAATAACGTACCTGATAATAGGGTGATCCGACTAGCGATGCGTCATGAAAAACAA AAGAAAAGTATGTCATCAAGGCTTTATTATTATATTGAATTTATGCTGAAAGTGCATTACTTTGTAAAGCATACCGAAAA ATATTTCGATCTCATCTATGTTACAAGCCCTAATATATTTGCACCATGGGGGACATTATTTCTACAGCGTGACATCACTA CAAACAAAACGATACTCGAAATTCGAGATCTATGGCCGGACAGTGTATCTGCCCTGGATAAGATGAATATCGACGTATTA ATGCCGATGTTAAGATTGATGGAAAAACGGATGTATAGAAATGCAAAGAAAATTGTAGTGAATAATATGTCGTTCATTCC ACATATTCAGAAATATGTAAAAAATAAGGACTTTCTATTCCTGCCGAATGCGATTAACGATGAAGAACTTAATCTTCGAC CGAAAAAAGCAGCATTCAGCGTCGTATATACTGGAAATCTAGGCTTTGCACAGGATAATAAACAGCTGGAGGAGATCGCT GTAGCACTTAATAAGAATAAAATTCCATTTAATGCGATTGTCTATGGAATACATGCCAATGACTTCAGACGATTTGTAGA TGAACAGCAGTTCGAATATGTTAACGTGTTTGAAACGCTGCCAAAGTCTGAATGTCTTTCATTTACGAGTGAACACCATG TGGCACTTTCCATTCTTAAGCAATCTGAAGTGTTTATGAACGTGCTTCCCGGCAAGGTGATTGACGCTCTATGCATGGAG GTGCCCGTTGTAACCAACTTAGGGGGCTTTACGCAAGCCCTGATACAGGATTATGAAGTGGGTAGTAATATTGAATCCGC TTCAACTGAAGAACTGGTGGAAGCCATCTTAACATATAAAGATGATCCGTTCATGCTAAGGCGTCATACAGAGAACACTA AGAAAATTCGTTCTGAAATTTTTAGATGGGAGACAAATATTCATAAACTAATGGATTTTATCAGTTAA
Upstream 100 bases:
>100_bases TTAAAGAAGTTAAATACTATAACTTCGGGAATTTATATAATTTATAACTACAACAACAGAATACGTTCGTATTCTGTTTG TTTTTTAATAAGGAGTTTCT
Downstream 100 bases:
>100_bases ATAAATTGAAGAGGCTGTAATTATGAAAATTATTATCGAATTGTTAGAAGAGCAGATACGCAACTTAAATCTTATTTGGA AGTTATCACGCTATAATCTT
Product: group 1 family glycosyl transferase
Products: NA
Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Capsular Polysaccharide Biosynthesis F; Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Protein; Group 1 Family Glycosyl Transferase; LPS Biosynthesis Related Glycosyltransferase; Group Glycosyltransferase; Group 1 Family Glycosyltransferase; Glycosyltransferase Group 1 Family; Lipopolysaccharide Biosynthesis Protein; Glycosyltransferase Group 1 Protein; Lipopolysaccharide Biosynthesis Glycosyltransferase; Glycosyltransferase Family 4 Protein; Glycosyl Transferase Family Protein; Glycosyltransferase Group 1 Family Protein
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MKSILLISQNFYPEIGSAANRMKNIFNHLVDHGYDVYILTTQPSYPNEKMYKDEKYWNDERLNNVPDNRVIRLAMRHEKQ KKSMSSRLYYYIEFMLKVHYFVKHTEKYFDLIYVTSPNIFAPWGTLFLQRDITTNKTILEIRDLWPDSVSALDKMNIDVL MPMLRLMEKRMYRNAKKIVVNNMSFIPHIQKYVKNKDFLFLPNAINDEELNLRPKKAAFSVVYTGNLGFAQDNKQLEEIA VALNKNKIPFNAIVYGIHANDFRRFVDEQQFEYVNVFETLPKSECLSFTSEHHVALSILKQSEVFMNVLPGKVIDALCME VPVVTNLGGFTQALIQDYEVGSNIESASTEELVEAILTYKDDPFMLRRHTENTKKIRSEIFRWETNIHKLMDFIS
Sequences:
>Translated_395_residues MKSILLISQNFYPEIGSAANRMKNIFNHLVDHGYDVYILTTQPSYPNEKMYKDEKYWNDERLNNVPDNRVIRLAMRHEKQ KKSMSSRLYYYIEFMLKVHYFVKHTEKYFDLIYVTSPNIFAPWGTLFLQRDITTNKTILEIRDLWPDSVSALDKMNIDVL MPMLRLMEKRMYRNAKKIVVNNMSFIPHIQKYVKNKDFLFLPNAINDEELNLRPKKAAFSVVYTGNLGFAQDNKQLEEIA VALNKNKIPFNAIVYGIHANDFRRFVDEQQFEYVNVFETLPKSECLSFTSEHHVALSILKQSEVFMNVLPGKVIDALCME VPVVTNLGGFTQALIQDYEVGSNIESASTEELVEAILTYKDDPFMLRRHTENTKKIRSEIFRWETNIHKLMDFIS >Mature_395_residues MKSILLISQNFYPEIGSAANRMKNIFNHLVDHGYDVYILTTQPSYPNEKMYKDEKYWNDERLNNVPDNRVIRLAMRHEKQ KKSMSSRLYYYIEFMLKVHYFVKHTEKYFDLIYVTSPNIFAPWGTLFLQRDITTNKTILEIRDLWPDSVSALDKMNIDVL MPMLRLMEKRMYRNAKKIVVNNMSFIPHIQKYVKNKDFLFLPNAINDEELNLRPKKAAFSVVYTGNLGFAQDNKQLEEIA VALNKNKIPFNAIVYGIHANDFRRFVDEQQFEYVNVFETLPKSECLSFTSEHHVALSILKQSEVFMNVLPGKVIDALCME VPVVTNLGGFTQALIQDYEVGSNIESASTEELVEAILTYKDDPFMLRRHTENTKKIRSEIFRWETNIHKLMDFIS
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46409; Mature: 46409
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSILLISQNFYPEIGSAANRMKNIFNHLVDHGYDVYILTTQPSYPNEKMYKDEKYWNDE CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHCCCCHHCCCHH RLNNVPDNRVIRLAMRHEKQKKSMSSRLYYYIEFMLKVHYFVKHTEKYFDLIYVTSPNIF HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCC APWGTLFLQRDITTNKTILEIRDLWPDSVSALDKMNIDVLMPMLRLMEKRMYRNAKKIVV CCHHHHEEEECCCCCCEEEEEHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHEE NNMSFIPHIQKYVKNKDFLFLPNAINDEELNLRPKKAAFSVVYTGNLGFAQDNKQLEEIA CCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHH VALNKNKIPFNAIVYGIHANDFRRFVDEQQFEYVNVFETLPKSECLSFTSEHHVALSILK HHHCCCCCCHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHH QSEVFMNVLPGKVIDALCMEVPVVTNLGGFTQALIQDYEVGSNIESASTEELVEAILTYK HHHHHHHHCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC DDPFMLRRHTENTKKIRSEIFRWETNIHKLMDFIS CCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKSILLISQNFYPEIGSAANRMKNIFNHLVDHGYDVYILTTQPSYPNEKMYKDEKYWNDE CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHCCCCHHCCCHH RLNNVPDNRVIRLAMRHEKQKKSMSSRLYYYIEFMLKVHYFVKHTEKYFDLIYVTSPNIF HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCC APWGTLFLQRDITTNKTILEIRDLWPDSVSALDKMNIDVLMPMLRLMEKRMYRNAKKIVV CCHHHHEEEECCCCCCEEEEEHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHEE NNMSFIPHIQKYVKNKDFLFLPNAINDEELNLRPKKAAFSVVYTGNLGFAQDNKQLEEIA CCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHH VALNKNKIPFNAIVYGIHANDFRRFVDEQQFEYVNVFETLPKSECLSFTSEHHVALSILK HHHCCCCCCHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHH QSEVFMNVLPGKVIDALCMEVPVVTNLGGFTQALIQDYEVGSNIESASTEELVEAILTYK HHHHHHHHCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC DDPFMLRRHTENTKKIRSEIFRWETNIHKLMDFIS CCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA