| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is fmtA [H]
Identifier: 222150805
GI number: 222150805
Start: 592863
End: 593825
Strand: Direct
Name: fmtA [H]
Synonym: MCCL_0555
Alternate gene names: 222150805
Gene position: 592863-593825 (Clockwise)
Preceding gene: 222150804
Following gene: 222150806
Centisome position: 28.2
GC content: 31.88
Gene sequence:
>963_bases ATGAAAATAGCCTTGGAATTTTTATTTAGTCGTAACCGCAATATATCTTACACTGCAATAGATAAATATTTAGATGATAT AAACTTTAATGGACAAATTCGAATAAGTCATGAAGGGCAGGGTATCTTTCATCAAAGCTATGGATATAAAAACTTAATTC AGGATCCGATAACATACGATACACAATTTTTAACAGCATCTATACAAAAATTTATTACGGGTATTATCATTGAACAACTG ATAGATGAAGGTAAAATCAGTAGAATGGATAAGATTGTTAAATATATTAACGGTTTACCTGATTTCATTACGATTGAAGA TTTACTGCTTCATATTAGTGGACTTAGTCCGTATAAGGTACATCACAATTTTTATGGACTTGATCAGTCCGTAGATATGA TTCGAGCATCTGGTGCTAAACTACCATTTCATAAATTTGATTATAACGATGCAAACTATATACTACTCGCGAAACTAATC GAGATTGTCGAAAACCAGACGTATAGAGCGGTAGTTTACGACAGAATTATCGACAAATATCAGCTTGCGCATAGTTGCTT TTATGACGAAGTTAACGATGCAACGACGGGCCTTCATCAATTTGGTAGTGTACTTATTGAAGATTGGCATAATGATCTTG ATAAGTACTATGGAGCAGGAAATATGTATATGTCACTGAAGGATATTGATATACTTAGTCGTCTATTCGCTAATCATCTT ATCTTCAATAAACCAAAAACAGAGTTCATACTAGCACCTGATCGCTATAAAAATCAAAAATACAGAAGTGGTATTTCTTT AAGAGATAATTATTTAAGATTAAGAGGCTCTTTATATGCGCACGATGTTGTAGTTTATTTTAATGGAACTTCGTTTATCT GTGTGGCATCCAATAGGGAGAGTAAACTATATCAAGCAGAAAAAATATTGTTAAATATACTCAATTCAAATAAATATTGC TAA
Upstream 100 bases:
>100_bases TGAGCATAAAGATAAGACCTTCAAATATTTTCAGAGATAAATTGAATTTATTATACTAGACCGAAAAGCATATGCTTTTC GGTTTTTTTAGGAGAGCGTA
Downstream 100 bases:
>100_bases TAATTGACAATTATAAATAAACGTTATAAATTCTATATATCGAATTGTCAAAGAGGTATTTATGAGAAAACTAATCGTTT TGTTGCTAATCATTGGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MKIALEFLFSRNRNISYTAIDKYLDDINFNGQIRISHEGQGIFHQSYGYKNLIQDPITYDTQFLTASIQKFITGIIIEQL IDEGKISRMDKIVKYINGLPDFITIEDLLLHISGLSPYKVHHNFYGLDQSVDMIRASGAKLPFHKFDYNDANYILLAKLI EIVENQTYRAVVYDRIIDKYQLAHSCFYDEVNDATTGLHQFGSVLIEDWHNDLDKYYGAGNMYMSLKDIDILSRLFANHL IFNKPKTEFILAPDRYKNQKYRSGISLRDNYLRLRGSLYAHDVVVYFNGTSFICVASNRESKLYQAEKILLNILNSNKYC
Sequences:
>Translated_320_residues MKIALEFLFSRNRNISYTAIDKYLDDINFNGQIRISHEGQGIFHQSYGYKNLIQDPITYDTQFLTASIQKFITGIIIEQL IDEGKISRMDKIVKYINGLPDFITIEDLLLHISGLSPYKVHHNFYGLDQSVDMIRASGAKLPFHKFDYNDANYILLAKLI EIVENQTYRAVVYDRIIDKYQLAHSCFYDEVNDATTGLHQFGSVLIEDWHNDLDKYYGAGNMYMSLKDIDILSRLFANHL IFNKPKTEFILAPDRYKNQKYRSGISLRDNYLRLRGSLYAHDVVVYFNGTSFICVASNRESKLYQAEKILLNILNSNKYC >Mature_320_residues MKIALEFLFSRNRNISYTAIDKYLDDINFNGQIRISHEGQGIFHQSYGYKNLIQDPITYDTQFLTASIQKFITGIIIEQL IDEGKISRMDKIVKYINGLPDFITIEDLLLHISGLSPYKVHHNFYGLDQSVDMIRASGAKLPFHKFDYNDANYILLAKLI EIVENQTYRAVVYDRIIDKYQLAHSCFYDEVNDATTGLHQFGSVLIEDWHNDLDKYYGAGNMYMSLKDIDILSRLFANHL IFNKPKTEFILAPDRYKNQKYRSGISLRDNYLRLRGSLYAHDVVVYFNGTSFICVASNRESKLYQAEKILLNILNSNKYC
Specific function: Affects the methicillin resistance level and autolysis in the presence of Triton X-100 as well as the cell wall structure but its precise function is unknown [H]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 37206; Mature: 37206
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIALEFLFSRNRNISYTAIDKYLDDINFNGQIRISHEGQGIFHQSYGYKNLIQDPITYD CEEEEEEHHHCCCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCCHHHHCCCCCCC TQFLTASIQKFITGIIIEQLIDEGKISRMDKIVKYINGLPDFITIEDLLLHISGLSPYKV HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCEEE HHNFYGLDQSVDMIRASGAKLPFHKFDYNDANYILLAKLIEIVENQTYRAVVYDRIIDKY ECCCCCCCHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH QLAHSCFYDEVNDATTGLHQFGSVLIEDWHNDLDKYYGAGNMYMSLKDIDILSRLFANHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHH IFNKPKTEFILAPDRYKNQKYRSGISLRDNYLRLRGSLYAHDVVVYFNGTSFICVASNRE EECCCCCCEEECCCHHCCHHHHCCCCHHHHHHHHHCCEEEEEEEEEECCCEEEEEECCCC SKLYQAEKILLNILNSNKYC HHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKIALEFLFSRNRNISYTAIDKYLDDINFNGQIRISHEGQGIFHQSYGYKNLIQDPITYD CEEEEEEHHHCCCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCCHHHHCCCCCCC TQFLTASIQKFITGIIIEQLIDEGKISRMDKIVKYINGLPDFITIEDLLLHISGLSPYKV HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCEEE HHNFYGLDQSVDMIRASGAKLPFHKFDYNDANYILLAKLIEIVENQTYRAVVYDRIIDKY ECCCCCCCHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH QLAHSCFYDEVNDATTGLHQFGSVLIEDWHNDLDKYYGAGNMYMSLKDIDILSRLFANHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHH IFNKPKTEFILAPDRYKNQKYRSGISLRDNYLRLRGSLYAHDVVVYFNGTSFICVASNRE EECCCCCCEEECCCHHCCHHHHCCCCHHHHHHHHHCCEEEEEEEEEECCCEEEEEECCCC SKLYQAEKILLNILNSNKYC HHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9371333 [H]