| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is fmtA [H]
Identifier: 222150806
GI number: 222150806
Start: 593887
End: 594978
Strand: Direct
Name: fmtA [H]
Synonym: MCCL_0556
Alternate gene names: 222150806
Gene position: 593887-594978 (Clockwise)
Preceding gene: 222150805
Following gene: 222150808
Centisome position: 28.25
GC content: 29.85
Gene sequence:
>1092_bases ATGAGAAAACTAATCGTTTTGTTGCTAATCATTGGATTATGGGGAGTATTAATTTATGAATTAACAGGTAAAAATAATGA AACGCACGAAGTAAATGGTAAACAAAATACAGGTGTTCAGACAAACGTATCTAAAACGAGTCAGAATGATGCATTAAAGA TACAGGTAGATCAATTGATAAAGAAAAATCATTTTAATGGCAGTGTATTTGTTGCTTACAATAATGATACATTATTAGAT CAGTCTTATGGATTTAAAGATGCTGATCAGACTAAAAAATTTGATGAGAATAGTATGTATCTAATTGGTTCTTGTCAAAA ATTAATAACTGGGATTATTACAAAGCAACTCGTTGATGATAGGAAAATTAATGTTGATGTATCTGTTAAACAATACATTC CAAATTTTAAATATCCAAATATTAAAATAAAAGATTTAATATTACATCGCTCGGGGTTAGTGAAGTATGCATTTCATGGA GATTATCATGGATTAGATGCATCAGTTGATAATATAAATGCGACAGGTCTTGGCCCAGTTCCTCATGGATCATATTTATA TAATGATGCAAATTATATTTTACTTGCAAAGGTGATAGAAAATGTCACAGGAAAATCTTATCAGCAAAATGTTGAACAGC GTATATTTAAGAAATATCATTTAAAAGAATCAAGTTTTTTTGATGACGAAAAATTAAGCCCTTATTTTGTTAAAGGATTA AAGTATGTGAATCATAATTGGAAAGCGATAGAGCCAACGGGCTTGGATAAATTTTATGGTGCAGGGAATATTTATATGTC TCCGAAAGATATGGGAATTTTATTGAATGATGTGATGCAATATAGAGTGTTAAGTAAGTCACAATTAGACTCAATATCGA AGCCCATGATTTTTAATATACATTCTAAATATAGATATGGCATGTCCTTAAAAAAAGAATATTACCGTTCGCGTGGATAC TTCTTTGGGATAGATTTTGTCAGCCTGTTTAATCATAACAAGGTCGTCGTCGTTGCTACTAACAAACTAACACAAAATGA AATTCCTAATAATGAGAAATTGGCACAACAGATTTATAGTCTACTAAAATAA
Upstream 100 bases:
>100_bases ATATTGTTAAATATACTCAATTCAAATAAATATTGCTAATAATTGACAATTATAAATAAACGTTATAAATTCTATATATC GAATTGTCAAAGAGGTATTT
Downstream 100 bases:
>100_bases AAAAGCGATAATGATTATTATAATAATCATTATCGCTTTTTATAGAATGACCTCATATAAAAAGCTCTTTATTTCTTCTG CATCACTTTCATTGACACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MRKLIVLLLIIGLWGVLIYELTGKNNETHEVNGKQNTGVQTNVSKTSQNDALKIQVDQLIKKNHFNGSVFVAYNNDTLLD QSYGFKDADQTKKFDENSMYLIGSCQKLITGIITKQLVDDRKINVDVSVKQYIPNFKYPNIKIKDLILHRSGLVKYAFHG DYHGLDASVDNINATGLGPVPHGSYLYNDANYILLAKVIENVTGKSYQQNVEQRIFKKYHLKESSFFDDEKLSPYFVKGL KYVNHNWKAIEPTGLDKFYGAGNIYMSPKDMGILLNDVMQYRVLSKSQLDSISKPMIFNIHSKYRYGMSLKKEYYRSRGY FFGIDFVSLFNHNKVVVVATNKLTQNEIPNNEKLAQQIYSLLK
Sequences:
>Translated_363_residues MRKLIVLLLIIGLWGVLIYELTGKNNETHEVNGKQNTGVQTNVSKTSQNDALKIQVDQLIKKNHFNGSVFVAYNNDTLLD QSYGFKDADQTKKFDENSMYLIGSCQKLITGIITKQLVDDRKINVDVSVKQYIPNFKYPNIKIKDLILHRSGLVKYAFHG DYHGLDASVDNINATGLGPVPHGSYLYNDANYILLAKVIENVTGKSYQQNVEQRIFKKYHLKESSFFDDEKLSPYFVKGL KYVNHNWKAIEPTGLDKFYGAGNIYMSPKDMGILLNDVMQYRVLSKSQLDSISKPMIFNIHSKYRYGMSLKKEYYRSRGY FFGIDFVSLFNHNKVVVVATNKLTQNEIPNNEKLAQQIYSLLK >Mature_363_residues MRKLIVLLLIIGLWGVLIYELTGKNNETHEVNGKQNTGVQTNVSKTSQNDALKIQVDQLIKKNHFNGSVFVAYNNDTLLD QSYGFKDADQTKKFDENSMYLIGSCQKLITGIITKQLVDDRKINVDVSVKQYIPNFKYPNIKIKDLILHRSGLVKYAFHG DYHGLDASVDNINATGLGPVPHGSYLYNDANYILLAKVIENVTGKSYQQNVEQRIFKKYHLKESSFFDDEKLSPYFVKGL KYVNHNWKAIEPTGLDKFYGAGNIYMSPKDMGILLNDVMQYRVLSKSQLDSISKPMIFNIHSKYRYGMSLKKEYYRSRGY FFGIDFVSLFNHNKVVVVATNKLTQNEIPNNEKLAQQIYSLLK
Specific function: Affects the methicillin resistance level and autolysis in the presence of Triton X-100 as well as the cell wall structure but its precise function is unknown [H]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 41620; Mature: 41620
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLIVLLLIIGLWGVLIYELTGKNNETHEVNGKQNTGVQTNVSKTSQNDALKIQVDQLI CHHHHHHHHHHHHHHHHHEEECCCCCCCEECCCCCCCCCEECCCCCCCCCEEEEEHHHHH KKNHFNGSVFVAYNNDTLLDQSYGFKDADQTKKFDENSMYLIGSCQKLITGIITKQLVDD HHCCCCCEEEEEECCCEEEECCCCCCCCHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCC RKINVDVSVKQYIPNFKYPNIKIKDLILHRSGLVKYAFHGDYHGLDASVDNINATGLGPV CEEEEEEEHHHHCCCCCCCCEEHHHEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCC PHGSYLYNDANYILLAKVIENVTGKSYQQNVEQRIFKKYHLKESSFFDDEKLSPYFVKGL CCCCEEECCCCEEEHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH KYVNHNWKAIEPTGLDKFYGAGNIYMSPKDMGILLNDVMQYRVLSKSQLDSISKPMIFNI HHHCCCCEEECCCCCHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE HSKYRYGMSLKKEYYRSRGYFFGIDFVSLFNHNKVVVVATNKLTQNEIPNNEKLAQQIYS CCHHHCCCHHHHHHHHCCCCEEEEHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHH LLK HHC >Mature Secondary Structure MRKLIVLLLIIGLWGVLIYELTGKNNETHEVNGKQNTGVQTNVSKTSQNDALKIQVDQLI CHHHHHHHHHHHHHHHHHEEECCCCCCCEECCCCCCCCCEECCCCCCCCCEEEEEHHHHH KKNHFNGSVFVAYNNDTLLDQSYGFKDADQTKKFDENSMYLIGSCQKLITGIITKQLVDD HHCCCCCEEEEEECCCEEEECCCCCCCCHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCC RKINVDVSVKQYIPNFKYPNIKIKDLILHRSGLVKYAFHGDYHGLDASVDNINATGLGPV CEEEEEEEHHHHCCCCCCCCEEHHHEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCC PHGSYLYNDANYILLAKVIENVTGKSYQQNVEQRIFKKYHLKESSFFDDEKLSPYFVKGL CCCCEEECCCCEEEHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH KYVNHNWKAIEPTGLDKFYGAGNIYMSPKDMGILLNDVMQYRVLSKSQLDSISKPMIFNI HHHCCCCEEECCCCCHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE HSKYRYGMSLKKEYYRSRGYFFGIDFVSLFNHNKVVVVATNKLTQNEIPNNEKLAQQIYS CCHHHCCCHHHHHHHHCCCCEEEEHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHH LLK HHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9371333 [H]