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The map label for this gene is sufD [H]

Identifier: 222150793

GI number: 222150793

Start: 581217

End: 582521

Strand: Direct

Name: sufD [H]

Synonym: MCCL_0543

Alternate gene names: 222150793

Gene position: 581217-582521 (Clockwise)

Preceding gene: 222150792

Following gene: 222150794

Centisome position: 27.65

GC content: 37.24

Gene sequence:

>1305_bases
ATGAGCAATACGATAGATTTTACACAAGAAATATTAACGGATCTTTCAGCAGCACGTAAAGAACCATCATGGATGGTGTC
ATTGCGTCAAGATGCACTGAATAAATTAAATACAATCGAAATGCCAAAGCCAGATAAAACGAAGCTGGATAAATGGAATT
TTGATGTTCATCATAAAGTAGTAGAAAGTGAAACTTTTACGTCTAAAGAAGCGTTACCTGAATCTGTTAAAGCATTAATC
GATTTAGAGAACACGCATAACTTAATTGTTCAACACAACAATACACCTGCGTTCATTGAAATTGAGGAGAAACTTCAATC
TCAAGGTGTTATCATTACCGATATTCAAACAGCGCTTACAGAACACAGTGAACTTGTAGAACAATATTATATGACAGATG
CTGTTAAAGTTGATGAGCATCGCTTAACGGCTCTTCATGCTGCTATGATGAATGGTGGATTATTTATCTATGTGCCACGT
AACGTCGTTATTGAACATCCTGTTCAATACATCGTGTTACACGATAATGAAGATGCGAATCTTTTTAATCACGTTATAAT
CGTAGCTGAAGAAAGTTCAGAAGTAACTTACGTTGAAAACTACTTATCTGGCGTTACTGCAGCTAAAGGTCAACTTAATA
TTATTTCAGAAGTTATCGCTAAAGATAATGCGAAAGTAAACTACGGTGCAGTAGACTTCTTAAATAAAGATTTAGTTGGA
CATGTCATTCGTCGCGGTATCGCAAATCGTGACGCAGTTATTGACTGGGCATTAGGTTTAATGAACGACGGCGATACAAT
TCATGACAATACAACATATTTAATGGGCGATGACTCTAAGAGTAACCTTAAGATTGTAGTTGTTGGTCGTGGTTCACAAA
AACTAAACTTTACATCACAAATTATTCAGTACGGCAAACGTTCTGAGGGTCATATTTTAAAGCATGGTGTAATGAAAGAC
AGTGCGTCATCTATCTTTAATGGTATCGGATACATCAAGCATGGGGGGACAAAAGCAGATGCACAGCAAGAATCACGTGT
ATTAATGCTCTCTGAGAAAGCCCGTGGAGATGCAAACCCAATTCTATTAATTGATGAAGATGACGTAACAGCAGGACATG
CTGCATCTGTAGGTCGTGTAGATCCGATGCAACTCTTCTACTTGATGAGTCGTGGTATTTCTAAACAAGAAGCAGAGCGT
CTCGTAATTCATGGATTCTTAGCGCCTGTTGTTAATGCATTGCCGATTGAAGCAGTTAAGAAACAATTAACAGAAGTAAT
TGAGTCTAAAGTTACTGGTAAATAA

Upstream 100 bases:

>100_bases
CTTGAAAAAGAAGGATACGACTGGATTAAACAAGAGTTAAATATTCAAGATGAAACTGTAGACGCATAAACCTGATTAAT
CATAATAGGAGGATATATTC

Downstream 100 bases:

>100_bases
ATACGTTTGAAAGGTCTTGATAGTGTGACCAATTTAAATATACAAGCAATACGTAAAGATTTCCCGATTCTTTCAGAAGT
AGTCAATGATAGACCACTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MSNTIDFTQEILTDLSAARKEPSWMVSLRQDALNKLNTIEMPKPDKTKLDKWNFDVHHKVVESETFTSKEALPESVKALI
DLENTHNLIVQHNNTPAFIEIEEKLQSQGVIITDIQTALTEHSELVEQYYMTDAVKVDEHRLTALHAAMMNGGLFIYVPR
NVVIEHPVQYIVLHDNEDANLFNHVIIVAEESSEVTYVENYLSGVTAAKGQLNIISEVIAKDNAKVNYGAVDFLNKDLVG
HVIRRGIANRDAVIDWALGLMNDGDTIHDNTTYLMGDDSKSNLKIVVVGRGSQKLNFTSQIIQYGKRSEGHILKHGVMKD
SASSIFNGIGYIKHGGTKADAQQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPMQLFYLMSRGISKQEAER
LVIHGFLAPVVNALPIEAVKKQLTEVIESKVTGK

Sequences:

>Translated_434_residues
MSNTIDFTQEILTDLSAARKEPSWMVSLRQDALNKLNTIEMPKPDKTKLDKWNFDVHHKVVESETFTSKEALPESVKALI
DLENTHNLIVQHNNTPAFIEIEEKLQSQGVIITDIQTALTEHSELVEQYYMTDAVKVDEHRLTALHAAMMNGGLFIYVPR
NVVIEHPVQYIVLHDNEDANLFNHVIIVAEESSEVTYVENYLSGVTAAKGQLNIISEVIAKDNAKVNYGAVDFLNKDLVG
HVIRRGIANRDAVIDWALGLMNDGDTIHDNTTYLMGDDSKSNLKIVVVGRGSQKLNFTSQIIQYGKRSEGHILKHGVMKD
SASSIFNGIGYIKHGGTKADAQQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPMQLFYLMSRGISKQEAER
LVIHGFLAPVVNALPIEAVKKQLTEVIESKVTGK
>Mature_433_residues
SNTIDFTQEILTDLSAARKEPSWMVSLRQDALNKLNTIEMPKPDKTKLDKWNFDVHHKVVESETFTSKEALPESVKALID
LENTHNLIVQHNNTPAFIEIEEKLQSQGVIITDIQTALTEHSELVEQYYMTDAVKVDEHRLTALHAAMMNGGLFIYVPRN
VVIEHPVQYIVLHDNEDANLFNHVIIVAEESSEVTYVENYLSGVTAAKGQLNIISEVIAKDNAKVNYGAVDFLNKDLVGH
VIRRGIANRDAVIDWALGLMNDGDTIHDNTTYLMGDDSKSNLKIVVVGRGSQKLNFTSQIIQYGKRSEGHILKHGVMKDS
ASSIFNGIGYIKHGGTKADAQQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPMQLFYLMSRGISKQEAERL
VIHGFLAPVVNALPIEAVKKQLTEVIESKVTGK

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=445, Percent_Identity=24.7191011235955, Blast_Score=131, Evalue=7e-32,
Organism=Escherichia coli, GI1787971, Length=249, Percent_Identity=25.3012048192771, Blast_Score=86, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 48186; Mature: 48055

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTIDFTQEILTDLSAARKEPSWMVSLRQDALNKLNTIEMPKPDKTKLDKWNFDVHHKV
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
VESETFTSKEALPESVKALIDLENTHNLIVQHNNTPAFIEIEEKLQSQGVIITDIQTALT
HHCCCCCCHHHHHHHHHHHHEECCCCEEEEEECCCCEEEEEHHHHHHCCEEEEEHHHHHH
EHSELVEQYYMTDAVKVDEHRLTALHAAMMNGGLFIYVPRNVVIEHPVQYIVLHDNEDAN
HHHHHHHHHHHHCCEEECHHHHHHHHHHHHCCCEEEEECCCEEEECCEEEEEEECCCCCC
LFNHVIIVAEESSEVTYVENYLSGVTAAKGQLNIISEVIAKDNAKVNYGAVDFLNKDLVG
CEEEEEEEEECCCCCHHHHHHHHCHHCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHH
HVIRRGIANRDAVIDWALGLMNDGDTIHDNTTYLMGDDSKSNLKIVVVGRGSQKLNFTSQ
HHHHHCCCCCCHHHHHHHHHCCCCCEEECCEEEEEECCCCCCEEEEEEECCCCCCCHHHH
IIQYGKRSEGHILKHGVMKDSASSIFNGIGYIKHGGTKADAQQESRVLMLSEKARGDANP
HHHHCCCCCCCEEHHCCHHHHHHHHHHCCCCEECCCCCCCCHHCCCEEEEECCCCCCCCC
ILLIDEDDVTAGHAASVGRVDPMQLFYLMSRGISKQEAERLVIHGFLAPVVNALPIEAVK
EEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
KQLTEVIESKVTGK
HHHHHHHHHHCCCC
>Mature Secondary Structure 
SNTIDFTQEILTDLSAARKEPSWMVSLRQDALNKLNTIEMPKPDKTKLDKWNFDVHHKV
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
VESETFTSKEALPESVKALIDLENTHNLIVQHNNTPAFIEIEEKLQSQGVIITDIQTALT
HHCCCCCCHHHHHHHHHHHHEECCCCEEEEEECCCCEEEEEHHHHHHCCEEEEEHHHHHH
EHSELVEQYYMTDAVKVDEHRLTALHAAMMNGGLFIYVPRNVVIEHPVQYIVLHDNEDAN
HHHHHHHHHHHHCCEEECHHHHHHHHHHHHCCCEEEEECCCEEEECCEEEEEEECCCCCC
LFNHVIIVAEESSEVTYVENYLSGVTAAKGQLNIISEVIAKDNAKVNYGAVDFLNKDLVG
CEEEEEEEEECCCCCHHHHHHHHCHHCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHH
HVIRRGIANRDAVIDWALGLMNDGDTIHDNTTYLMGDDSKSNLKIVVVGRGSQKLNFTSQ
HHHHHCCCCCCHHHHHHHHHCCCCCEEECCEEEEEECCCCCCEEEEEEECCCCCCCHHHH
IIQYGKRSEGHILKHGVMKDSASSIFNGIGYIKHGGTKADAQQESRVLMLSEKARGDANP
HHHHCCCCCCCEEHHCCHHHHHHHHHHCCCCEECCCCCCCCHHCCCEEEEECCCCCCCCC
ILLIDEDDVTAGHAASVGRVDPMQLFYLMSRGISKQEAERLVIHGFLAPVVNALPIEAVK
EEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
KQLTEVIESKVTGK
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]