| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is est [H]
Identifier: 222150777
GI number: 222150777
Start: 559785
End: 560525
Strand: Direct
Name: est [H]
Synonym: MCCL_0527
Alternate gene names: 222150777
Gene position: 559785-560525 (Clockwise)
Preceding gene: 222150776
Following gene: 222150778
Centisome position: 26.63
GC content: 38.46
Gene sequence:
>741_bases ATGAAAATAAGATTACCAGAACCGTTCTTTTTTGAAGAGGGAAAAAGAGCAGTTTTATTATTACATGGGTTTACTGGGAA TTCATCAGATGTGAGACAACTTGGACGATTCCTGCAGAAAAAAGGGTATACAAGTTATGCACCACACTATGAAGGTCATG GAGTACCCCCAGAAGAACTGCTTGCATCTAGTCCTCATGTATGGTGGAGCCAAGTCCTAGAAGCTTATGATTTCTTAGTA GAAAAAGGATATAATGAAATTGCAGTAGCAGGACTATCACTCGGTGGTGTCTTCGCTTTGAAGCTGGCGCAATATCGTGA TGTGTTAGCTGTAGCTACAATGTGCAGCCCGATGTATATTAAGACGACTGGCAATATGTATGAGGGTGTCCTGGCGTATG CAAGTGAGTTTAAGAAACGTGAAGGTAAATCAAAGGTACAAATTGATCGTGAAATGGAAGCTTTTCATCCGACAGATATG CTTGTAGATTTACAAAAGACGATTCAAGATGTCCGAGATACAGTAGATAATGTATATGCGCCACTGTTTGTAGCTCAAGG TAGACTGGATACGATGATTAATCCGGATTCGGCGAACATTATCTACAATGAAGCAGAAAGCGATGACAAAGAAATGCATT GGTATGAACAAAGTGGTCACGTTATAACAATAGATAAAGAAAAAGAACAGTTATTTGAAGATTATTATCAGTTTTTAGAA CAATTAGACTGGTCAAATTAA
Upstream 100 bases:
>100_bases TTAACACAGGTCCGGACAATCGCGTTCGGGCTTTTTTATTTTAAATCTGTTCGCAAAAAACTTACAATAGTAGATGAGGA TATTAAAAGGAGAATGTATT
Downstream 100 bases:
>100_bases AGGAGGAATTATATGCATCTGTATGAACATGAAGTAATTGCATATTTAAAATCATTAAAGGGTAGTGCAGTTACGATAGA AGCAATAGAAGCGCATCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MKIRLPEPFFFEEGKRAVLLLHGFTGNSSDVRQLGRFLQKKGYTSYAPHYEGHGVPPEELLASSPHVWWSQVLEAYDFLV EKGYNEIAVAGLSLGGVFALKLAQYRDVLAVATMCSPMYIKTTGNMYEGVLAYASEFKKREGKSKVQIDREMEAFHPTDM LVDLQKTIQDVRDTVDNVYAPLFVAQGRLDTMINPDSANIIYNEAESDDKEMHWYEQSGHVITIDKEKEQLFEDYYQFLE QLDWSN
Sequences:
>Translated_246_residues MKIRLPEPFFFEEGKRAVLLLHGFTGNSSDVRQLGRFLQKKGYTSYAPHYEGHGVPPEELLASSPHVWWSQVLEAYDFLV EKGYNEIAVAGLSLGGVFALKLAQYRDVLAVATMCSPMYIKTTGNMYEGVLAYASEFKKREGKSKVQIDREMEAFHPTDM LVDLQKTIQDVRDTVDNVYAPLFVAQGRLDTMINPDSANIIYNEAESDDKEMHWYEQSGHVITIDKEKEQLFEDYYQFLE QLDWSN >Mature_246_residues MKIRLPEPFFFEEGKRAVLLLHGFTGNSSDVRQLGRFLQKKGYTSYAPHYEGHGVPPEELLASSPHVWWSQVLEAYDFLV EKGYNEIAVAGLSLGGVFALKLAQYRDVLAVATMCSPMYIKTTGNMYEGVLAYASEFKKREGKSKVQIDREMEAFHPTDM LVDLQKTIQDVRDTVDNVYAPLFVAQGRLDTMINPDSANIIYNEAESDDKEMHWYEQSGHVITIDKEKEQLFEDYYQFLE QLDWSN
Specific function: Involved in the detoxification of xenobiotics. Shows maximal activity with C6 substrates, with gradually decreasing activity from C8 to C12 substrates. No activity for higher chain length substrates acids rather than long-chain ones [H]
COG id: COG1647
COG function: function code R; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lipase/esterase LIP3/BchO family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012354 - InterPro: IPR001375 [H]
Pfam domain/function: PF00326 Peptidase_S9 [H]
EC number: =3.1.1.1 [H]
Molecular weight: Translated: 28228; Mature: 28228
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRLPEPFFFEEGKRAVLLLHGFTGNSSDVRQLGRFLQKKGYTSYAPHYEGHGVPPEEL CCCCCCCCCHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH LASSPHVWWSQVLEAYDFLVEKGYNEIAVAGLSLGGVFALKLAQYRDVLAVATMCSPMYI HCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHCHHHHHHHHHHHHHHHHHHHHHCCCEEE KTTGNMYEGVLAYASEFKKREGKSKVQIDREMEAFHPTDMLVDLQKTIQDVRDTVDNVYA EECCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH PLFVAQGRLDTMINPDSANIIYNEAESDDKEMHWYEQSGHVITIDKEKEQLFEDYYQFLE HHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHEECCCCEEEEECHHHHHHHHHHHHHH QLDWSN HCCCCC >Mature Secondary Structure MKIRLPEPFFFEEGKRAVLLLHGFTGNSSDVRQLGRFLQKKGYTSYAPHYEGHGVPPEEL CCCCCCCCCHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH LASSPHVWWSQVLEAYDFLVEKGYNEIAVAGLSLGGVFALKLAQYRDVLAVATMCSPMYI HCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHCHHHHHHHHHHHHHHHHHHHHHCCCEEE KTTGNMYEGVLAYASEFKKREGKSKVQIDREMEAFHPTDMLVDLQKTIQDVRDTVDNVYA EECCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH PLFVAQGRLDTMINPDSANIIYNEAESDDKEMHWYEQSGHVITIDKEKEQLFEDYYQFLE HHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHEECCCCEEEEECHHHHHHHHHHHHHH QLDWSN HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1369099 [H]