| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222150617
Identifier: 222150617
GI number: 222150617
Start: 389170
End: 389982
Strand: Direct
Name: 222150617
Synonym: MCCL_0367
Alternate gene names: NA
Gene position: 389170-389982 (Clockwise)
Preceding gene: 222150616
Following gene: 222150618
Centisome position: 18.51
GC content: 37.15
Gene sequence:
>813_bases ATGAGCAAGAAGATGGCAATTATTGTCTTTGTTGCAGGATTGCTTATCTGTCTGTATCCTCTGATGGCAAAAGTCTATTA TAATTACGACATGTCCCGTCAATCCAAAGTACTGGATAGACAATTTCAAGTGAACGCTACACATCAGAAAGTGAAGTATG CACAGTTTGAAGCCTATAATCGTGATATGCTATCATCTCAAAATATTGAAACACCTAAAGTTAAAGTTCAAACCAATAAT CAATATGATGAACAACTTGGAACAGATGATACAATAGCAACCATAAAAATTCCGAAGCTCAATCTGCATTATCCAGTATA CGATCAAGCTACACCAGAGAACTTAAATAGAGGCGTATCTAGAGTCATTGGCACAAGTTTTCCGGTGGGGGGGCGCTCAA CTAATAGTGTCTTAGCAGCACATAGCTACTCACCCTATCATGAATGGTTCACACATATCGACAAGCTTGATAATGGAGAT AAGATTATTATCAATAACTTCAAGGAGACGCTCTACTATAAAGTATATGACAAAAAGGTAGTCAGCCCCGATCAGGTAGA GGCATTATCGATTATTAAAGGGAAAGATATTATTACGTTATTAACATGTACACCTTCTGGAGCAGATAGAATATTGATCT ATGCAGAGAGAACAACGAAGGATGGCAATAAGATAAAGCTTCCTAAAACACAGCCACTTTCTCAGGAGCAATCGTTGATG GAAAGACTGAAAGTGCTTTCGGATTCATGGTTTGTGATAGTCGTAATTCTCTTGTTGTCACTAGCTTTTATAAAAAAGAT TATGCATCATTAA
Upstream 100 bases:
>100_bases TATACGTCTATAAGAATTATTTGATAGGTATCGGGTTATCTATTGTAATCTACCTGCTCTATCGATATTTCAAAAAATAT AGAAAGAAAAAAGTGAATCG
Downstream 100 bases:
>100_bases CATGAATATATAATTTATTAAAAACAATAAGTTAAAATTTAGAGCGTATTAGATAATATGAGTTTCTTTGAATCGTCTAC GCTTAATTGGACAACTTACC
Product: hypothetical protein
Products: NA
Alternate protein names: Sortase; Fimbrial Associated Sortase-Like Protein; Peptidase C; Sortase SrtB; Sortase-Like Protein; Sortase SrtC; Fimbrial Associated Sortase; Sortase Family Protein LPXTG-Site Transpeptidase; Sortase C Family; C-Type Sortase; Fimbria-Associated Protein; Fimbrial Associated Sortase Family Protein; Sortase C Type; Lpxtg-Site Transpeptidase Family Protein; Sortase C; SortaseC
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MSKKMAIIVFVAGLLICLYPLMAKVYYNYDMSRQSKVLDRQFQVNATHQKVKYAQFEAYNRDMLSSQNIETPKVKVQTNN QYDEQLGTDDTIATIKIPKLNLHYPVYDQATPENLNRGVSRVIGTSFPVGGRSTNSVLAAHSYSPYHEWFTHIDKLDNGD KIIINNFKETLYYKVYDKKVVSPDQVEALSIIKGKDIITLLTCTPSGADRILIYAERTTKDGNKIKLPKTQPLSQEQSLM ERLKVLSDSWFVIVVILLLSLAFIKKIMHH
Sequences:
>Translated_270_residues MSKKMAIIVFVAGLLICLYPLMAKVYYNYDMSRQSKVLDRQFQVNATHQKVKYAQFEAYNRDMLSSQNIETPKVKVQTNN QYDEQLGTDDTIATIKIPKLNLHYPVYDQATPENLNRGVSRVIGTSFPVGGRSTNSVLAAHSYSPYHEWFTHIDKLDNGD KIIINNFKETLYYKVYDKKVVSPDQVEALSIIKGKDIITLLTCTPSGADRILIYAERTTKDGNKIKLPKTQPLSQEQSLM ERLKVLSDSWFVIVVILLLSLAFIKKIMHH >Mature_269_residues SKKMAIIVFVAGLLICLYPLMAKVYYNYDMSRQSKVLDRQFQVNATHQKVKYAQFEAYNRDMLSSQNIETPKVKVQTNNQ YDEQLGTDDTIATIKIPKLNLHYPVYDQATPENLNRGVSRVIGTSFPVGGRSTNSVLAAHSYSPYHEWFTHIDKLDNGDK IIINNFKETLYYKVYDKKVVSPDQVEALSIIKGKDIITLLTCTPSGADRILIYAERTTKDGNKIKLPKTQPLSQEQSLME RLKVLSDSWFVIVVILLLSLAFIKKIMHH
Specific function: Unknown
COG id: COG3764
COG function: function code M; Sortase (surface protein transpeptidase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30868; Mature: 30737
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKMAIIVFVAGLLICLYPLMAKVYYNYDMSRQSKVLDRQFQVNATHQKVKYAQFEAYN CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCHHHHHHHHHHHHHC RDMLSSQNIETPKVKVQTNNQYDEQLGTDDTIATIKIPKLNLHYPVYDQATPENLNRGVS HHHHCCCCCCCCEEEEEECCCHHHHCCCCCCEEEEEECCEEECCCCCCCCCHHHHHHHHH RVIGTSFPVGGRSTNSVLAAHSYSPYHEWFTHIDKLDNGDKIIINNFKETLYYKVYDKKV HHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHHHEEEEEECCCC VSPDQVEALSIIKGKDIITLLTCTPSGADRILIYAERTTKDGNKIKLPKTQPLSQEQSLM CCCCHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCEEECCCCCCCCHHHHHH ERLKVLSDSWFVIVVILLLSLAFIKKIMHH HHHHHHCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKKMAIIVFVAGLLICLYPLMAKVYYNYDMSRQSKVLDRQFQVNATHQKVKYAQFEAYN CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCHHHHHHHHHHHHHC RDMLSSQNIETPKVKVQTNNQYDEQLGTDDTIATIKIPKLNLHYPVYDQATPENLNRGVS HHHHCCCCCCCCEEEEEECCCHHHHCCCCCCEEEEEECCEEECCCCCCCCCHHHHHHHHH RVIGTSFPVGGRSTNSVLAAHSYSPYHEWFTHIDKLDNGDKIIINNFKETLYYKVYDKKV HHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHHHEEEEEECCCC VSPDQVEALSIIKGKDIITLLTCTPSGADRILIYAERTTKDGNKIKLPKTQPLSQEQSLM CCCCHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCEEECCCCCCCCHHHHHH ERLKVLSDSWFVIVVILLLSLAFIKKIMHH HHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA