| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222150616
Identifier: 222150616
GI number: 222150616
Start: 388304
End: 389173
Strand: Direct
Name: 222150616
Synonym: MCCL_0366
Alternate gene names: NA
Gene position: 388304-389173 (Clockwise)
Preceding gene: 222150615
Following gene: 222150617
Centisome position: 18.47
GC content: 38.16
Gene sequence:
>870_bases TTGAAACCCGAAAAGAAAACAAAGAAAAATAGGATCTCTAATGTGATATTCGGCTTGATATTCTTCGCTGGATTCAGCAT ATTAATCTATCCTATGATCAGTGCGGTATATTATGACTATGAAGCGAGTAACGAGGTTAATGATTTCAATAAAGAGGTTG AACTGCTGTCAGATCAGCAGATTAAAGCACGTATCGATAAGGCGAAAGCATATAATCAGTCGTTAACAGGAAATGAAGCA TTACACGACGCATATAGTAAAGCACAAGAACAAGAAGGTCAACGTGAATATGCGAAGATGCTGGAAGTACATGAGAAGAT AGGTCATGTTGAGATACCTGCTATTCATCAGGATATCCCTTTATTTGCCGGAACAACGGAAAGAGTGCTTCAACAAGGAC TTGGACATCTTGAGAATACTTCCTTACCTGTAGGCGGAAAGAACACCCATAGTATCATCACAGGACATAGAGGGCTGCCT GATAAGAAGCTGTTTACCGATCTTGATAAAATGAAGATAGGGGACATGATATATGTGCATAATATTCAAGGGATACTGGC CTACAAAGTTGAACGTATCAAGGTGATAAAACCGGATGATTTCAGAGATTTGAAAATAAAGAAAGGTACAGACAGATTAA CACTACTGACATGTACACCGTACATGATAAATTCACATCGGCTGATAGTAACTGGTCATCGCGTTCCATATACGCCTGAA GCGACGAGCCATCAATCGACTCAGGAACCATGGTGGTATAAATTTCTATACGTCTATAAGAATTATTTGATAGGTATCGG GTTATCTATTGTAATCTACCTGCTCTATCGATATTTCAAAAAATATAGAAAGAAAAAAGTGAATCGATGA
Upstream 100 bases:
>100_bases GGCGCTAGCTTTAGTATTCTTTAGAAGAAAGCAAGCATAACTTTGTTAAATGTGGTGGACGCTGTCCACCTCATTTTTTT AATAAGGAAGGCGATTTTTT
Downstream 100 bases:
>100_bases GCAAGAAGATGGCAATTATTGTCTTTGTTGCAGGATTGCTTATCTGTCTGTATCCTCTGATGGCAAAAGTCTATTATAAT TACGACATGTCCCGTCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: Sortase; Fimbrial Associated Sortase-Like Protein; Peptidase C; Sortase SrtB; Sortase-Like Protein; Sortase SrtC; Fimbrial Associated Sortase; Sortase Family Protein LPXTG-Site Transpeptidase; Sortase C Family; C-Type Sortase; Fimbria-Associated Protein; Ortase Yhcs B.Subtilis Ortholog; Fimbrial Associated Sortase Family Protein; Sortase C Type; Lpxtg-Site Transpeptidase Family Protein; Sortase C; SortaseC
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MKPEKKTKKNRISNVIFGLIFFAGFSILIYPMISAVYYDYEASNEVNDFNKEVELLSDQQIKARIDKAKAYNQSLTGNEA LHDAYSKAQEQEGQREYAKMLEVHEKIGHVEIPAIHQDIPLFAGTTERVLQQGLGHLENTSLPVGGKNTHSIITGHRGLP DKKLFTDLDKMKIGDMIYVHNIQGILAYKVERIKVIKPDDFRDLKIKKGTDRLTLLTCTPYMINSHRLIVTGHRVPYTPE ATSHQSTQEPWWYKFLYVYKNYLIGIGLSIVIYLLYRYFKKYRKKKVNR
Sequences:
>Translated_289_residues MKPEKKTKKNRISNVIFGLIFFAGFSILIYPMISAVYYDYEASNEVNDFNKEVELLSDQQIKARIDKAKAYNQSLTGNEA LHDAYSKAQEQEGQREYAKMLEVHEKIGHVEIPAIHQDIPLFAGTTERVLQQGLGHLENTSLPVGGKNTHSIITGHRGLP DKKLFTDLDKMKIGDMIYVHNIQGILAYKVERIKVIKPDDFRDLKIKKGTDRLTLLTCTPYMINSHRLIVTGHRVPYTPE ATSHQSTQEPWWYKFLYVYKNYLIGIGLSIVIYLLYRYFKKYRKKKVNR >Mature_289_residues MKPEKKTKKNRISNVIFGLIFFAGFSILIYPMISAVYYDYEASNEVNDFNKEVELLSDQQIKARIDKAKAYNQSLTGNEA LHDAYSKAQEQEGQREYAKMLEVHEKIGHVEIPAIHQDIPLFAGTTERVLQQGLGHLENTSLPVGGKNTHSIITGHRGLP DKKLFTDLDKMKIGDMIYVHNIQGILAYKVERIKVIKPDDFRDLKIKKGTDRLTLLTCTPYMINSHRLIVTGHRVPYTPE ATSHQSTQEPWWYKFLYVYKNYLIGIGLSIVIYLLYRYFKKYRKKKVNR
Specific function: Unknown
COG id: COG3764
COG function: function code M; Sortase (surface protein transpeptidase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33488; Mature: 33488
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPEKKTKKNRISNVIFGLIFFAGFSILIYPMISAVYYDYEASNEVNDFNKEVELLSDQQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHH IKARIDKAKAYNQSLTGNEALHDAYSKAQEQEGQREYAKMLEVHEKIGHVEIPAIHQDIP HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHCCCC LFAGTTERVLQQGLGHLENTSLPVGGKNTHSIITGHRGLPDKKLFTDLDKMKIGDMIYVH CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCEEEEE NIQGILAYKVERIKVIKPDDFRDLKIKKGTDRLTLLTCTPYMINSHRLIVTGHRVPYTPE CCCHHHHEEEEEEEEECCCCCCCEEEECCCCEEEEEEECCEEECCCEEEEECCCCCCCCC ATSHQSTQEPWWYKFLYVYKNYLIGIGLSIVIYLLYRYFKKYRKKKVNR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKPEKKTKKNRISNVIFGLIFFAGFSILIYPMISAVYYDYEASNEVNDFNKEVELLSDQQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHH IKARIDKAKAYNQSLTGNEALHDAYSKAQEQEGQREYAKMLEVHEKIGHVEIPAIHQDIP HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHCCCC LFAGTTERVLQQGLGHLENTSLPVGGKNTHSIITGHRGLPDKKLFTDLDKMKIGDMIYVH CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCEEEEE NIQGILAYKVERIKVIKPDDFRDLKIKKGTDRLTLLTCTPYMINSHRLIVTGHRVPYTPE CCCHHHHEEEEEEEEECCCCCCCEEEECCCCEEEEEEECCEEECCCEEEEECCCCCCCCC ATSHQSTQEPWWYKFLYVYKNYLIGIGLSIVIYLLYRYFKKYRKKKVNR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA