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The map label for this gene is ydcN [C]

Identifier: 222150597

GI number: 222150597

Start: 364436

End: 364939

Strand: Direct

Name: ydcN [C]

Synonym: MCCL_0347

Alternate gene names: 222150597

Gene position: 364436-364939 (Clockwise)

Preceding gene: 222150594

Following gene: 222150598

Centisome position: 17.33

GC content: 29.96

Gene sequence:

>504_bases
ATGTCTATTGGAGAAAATATTAGAAAGATTAGAAAAGAACGTGAATTAACATTAAAACAAGTCGCTGAATTAACGGATTT
ATCTATTCCATTCCTCTCTCAGTTAGAAACGAATAAAAGTGATGCCACAATGGCTACTATAAGATTAATAGCTGATGCGT
TAGAAGTTCATCCAAGCCAGTTTTTTTATGAACATGCATCACTAATGGATGTATTAAATGCAAAAAGACAGTCATTTTAT
TACGAACAACTCGCATATGACAAAGGTTCGCCATTTATTCCATTAAAAGTTAAATTAAAGCCAGGAAATACAGATCTAGA
ATATGTTCAGCATGATGGTTTTGAATTTGTATATTGTTTAAAAGGAAGACTGACAATATCTTTGGATAATAATAATATTG
AGTTATCTGAAGGAGAATCACTGATGTATGATGCCAATAAACCTCATTATTGGTTTAATTATACAGATGAAGTTGTAGAA
TTCTTAGTTATTAATCAAAATTAG

Upstream 100 bases:

>100_bases
TAAGTATCACTTAAATTGTATAATTAACAGATTTTTCTGTCAATTACATATAATTAGATTTATCATAAAAGTACAATGAA
AAATAACAGGAGTAGTGCAT

Downstream 100 bases:

>100_bases
TATATTGGAAATATGTAGGATATGAAAAGGAAAGAAAAAATATATCTTAAATTGTCTCATTGTAAACCTAGAATCTAAAA
CACATTCTGGGTTTTATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family; Cupin 2 Domain-Containing Protein; Cro/CI Family Transcriptional Regulator; MerR Family Transcriptional Regulator; Cupin 2 Conserved Barrel Domain Protein; Transcriptional Regulator MerR Family; Cupin Domain Protein; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator Cro/CI Family; Transcriptional Regulator XRE Family With Cupin Sensor; Cupin 2 Conserved Barrel Domain-Containing Protein; HTH-Type Transcriptional Regulator YdcN; Transcriptional Regulator Merr Family; Helix-Turn-Helix Domain Protein; Helix-Turn-Helix Transcriptional Regulator; Transcriptional Regulator Xre Familiy; Helix-Turn-Helix Protein

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MSIGENIRKIRKERELTLKQVAELTDLSIPFLSQLETNKSDATMATIRLIADALEVHPSQFFYEHASLMDVLNAKRQSFY
YEQLAYDKGSPFIPLKVKLKPGNTDLEYVQHDGFEFVYCLKGRLTISLDNNNIELSEGESLMYDANKPHYWFNYTDEVVE
FLVINQN

Sequences:

>Translated_167_residues
MSIGENIRKIRKERELTLKQVAELTDLSIPFLSQLETNKSDATMATIRLIADALEVHPSQFFYEHASLMDVLNAKRQSFY
YEQLAYDKGSPFIPLKVKLKPGNTDLEYVQHDGFEFVYCLKGRLTISLDNNNIELSEGESLMYDANKPHYWFNYTDEVVE
FLVINQN
>Mature_166_residues
SIGENIRKIRKERELTLKQVAELTDLSIPFLSQLETNKSDATMATIRLIADALEVHPSQFFYEHASLMDVLNAKRQSFYY
EQLAYDKGSPFIPLKVKLKPGNTDLEYVQHDGFEFVYCLKGRLTISLDNNNIELSEGESLMYDANKPHYWFNYTDEVVEF
LVINQN

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19379; Mature: 19248

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIGENIRKIRKERELTLKQVAELTDLSIPFLSQLETNKSDATMATIRLIADALEVHPSQ
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHH
FFYEHASLMDVLNAKRQSFYYEQLAYDKGSPFIPLKVKLKPGNTDLEYVQHDGFEFVYCL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHEECCCCEEEEEE
KGRLTISLDNNNIELSEGESLMYDANKPHYWFNYTDEVVEFLVINQN
CCEEEEEECCCEEEECCCCEEEEECCCCEEEECCHHHHEEEEEECCC
>Mature Secondary Structure 
SIGENIRKIRKERELTLKQVAELTDLSIPFLSQLETNKSDATMATIRLIADALEVHPSQ
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHH
FFYEHASLMDVLNAKRQSFYYEQLAYDKGSPFIPLKVKLKPGNTDLEYVQHDGFEFVYCL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHEECCCCEEEEEE
KGRLTISLDNNNIELSEGESLMYDANKPHYWFNYTDEVVEFLVINQN
CCEEEEEECCCEEEECCCCEEEEECCCCEEEECCHHHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA