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The map label for this gene is ldcA [C]

Identifier: 222150496

GI number: 222150496

Start: 246922

End: 247929

Strand: Direct

Name: ldcA [C]

Synonym: MCCL_0246

Alternate gene names: 222150496

Gene position: 246922-247929 (Clockwise)

Preceding gene: 222150494

Following gene: 222150497

Centisome position: 11.75

GC content: 35.42

Gene sequence:

>1008_bases
ATGATCAAATATCCAACGCTTAAAGATAATTTTACAATAGGTATTACTGCACCTTCTTCTGGTATCCCTGAGAATTGTCA
TCATTTTATGGACGAGATTAAAGAACGTTTTAAAGATGTAAACTTGATTATCGGTGATACGGTAATGACGCAATATAAAG
CAAAATCAAGTCATATGAATAAGCGAGCTAAAGAACTTAATGAGTTTTTACAAAGAGAAGATATTGATATTATAATTCCT
CCATGGGGCGGAGAACTTGCCATTGAAGTAATAGATAAGATTGATTATGCTAATATTCAACCGAAATGGATAATGGGTTA
TTCGGATACGAGCCTTATCCTTCTTGCAATTACTTTGAATACTGGTATAGCGACAGCGCATGGCACGAATATTGTGGACT
TACGTGGAAAATATTCAGACAAAACAACGAGTGCATGGGAACGTGTATTAAAACTTCAGAGGAATGAGGAAATAGTTCAA
TATTCATCTGAAATGTTTCAGAACAGCTGGACCCATCATATTCCAACAGATTACATATTTAATTTTACTGAGCAGACAAA
GTGGAAGTCATTAAGTGGAAACAATGTAAAGATTGAAGGACGTTTACTTGGAGGATGTATTGATGTCATCTCTCATATTG
TAGGAACACCATATGGAGATGTGAATCGATTTAGAAATGAATACATAGGTGAAGAACCGATATTATGGTATCTAGAAAAC
TGTGAGTCATCTTCAGTTACGTGTCGAAGAATGTTACTCCAGATGAAGTATGCGGGTTGGTTTGATAATGTAAGTGGTAT
TATCTTTGGGAGGACTCAAGTGGATGAAGCGGTGGATGGATATACAATGATTGATGTATATGAAGATATTGCCGATGAAC
TAGATATACCAATACTATATGACGTTGATTGTGGGCATCAACCTCCGCAAATTACTTTTATTAATGGTGCATACGGTATA
GTTGAGTTTGATAATGGAAAAGGAAAGGTTACGCAGAAGTTTATCTAA

Upstream 100 bases:

>100_bases
TGGTAATTATATATAAAATAATAGAAAATACAAATAATTGTATTAATTAATAAAAATGATTGTTTAAAGAATAGTATTGA
ATATTTTGGAGGGATTATAA

Downstream 100 bases:

>100_bases
TTTAAGTCGAGATGACGTTATGACTTTAGGTGTTACTTCTCTTGGTCCTGACAGTATCTATCGTATTGGCGGTTTATGAA
TTTAAGGATTGATAATAAAG

Product: peptidase U61, LD-carboxypeptidase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MIKYPTLKDNFTIGITAPSSGIPENCHHFMDEIKERFKDVNLIIGDTVMTQYKAKSSHMNKRAKELNEFLQREDIDIIIP
PWGGELAIEVIDKIDYANIQPKWIMGYSDTSLILLAITLNTGIATAHGTNIVDLRGKYSDKTTSAWERVLKLQRNEEIVQ
YSSEMFQNSWTHHIPTDYIFNFTEQTKWKSLSGNNVKIEGRLLGGCIDVISHIVGTPYGDVNRFRNEYIGEEPILWYLEN
CESSSVTCRRMLLQMKYAGWFDNVSGIIFGRTQVDEAVDGYTMIDVYEDIADELDIPILYDVDCGHQPPQITFINGAYGI
VEFDNGKGKVTQKFI

Sequences:

>Translated_335_residues
MIKYPTLKDNFTIGITAPSSGIPENCHHFMDEIKERFKDVNLIIGDTVMTQYKAKSSHMNKRAKELNEFLQREDIDIIIP
PWGGELAIEVIDKIDYANIQPKWIMGYSDTSLILLAITLNTGIATAHGTNIVDLRGKYSDKTTSAWERVLKLQRNEEIVQ
YSSEMFQNSWTHHIPTDYIFNFTEQTKWKSLSGNNVKIEGRLLGGCIDVISHIVGTPYGDVNRFRNEYIGEEPILWYLEN
CESSSVTCRRMLLQMKYAGWFDNVSGIIFGRTQVDEAVDGYTMIDVYEDIADELDIPILYDVDCGHQPPQITFINGAYGI
VEFDNGKGKVTQKFI
>Mature_335_residues
MIKYPTLKDNFTIGITAPSSGIPENCHHFMDEIKERFKDVNLIIGDTVMTQYKAKSSHMNKRAKELNEFLQREDIDIIIP
PWGGELAIEVIDKIDYANIQPKWIMGYSDTSLILLAITLNTGIATAHGTNIVDLRGKYSDKTTSAWERVLKLQRNEEIVQ
YSSEMFQNSWTHHIPTDYIFNFTEQTKWKSLSGNNVKIEGRLLGGCIDVISHIVGTPYGDVNRFRNEYIGEEPILWYLEN
CESSSVTCRRMLLQMKYAGWFDNVSGIIFGRTQVDEAVDGYTMIDVYEDIADELDIPILYDVDCGHQPPQITFINGAYGI
VEFDNGKGKVTQKFI

Specific function: L,D-carboxypeptidase [C]

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S66 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003507 [H]

Pfam domain/function: PF02016 Peptidase_S66 [H]

EC number: NA

Molecular weight: Translated: 38233; Mature: 38233

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKYPTLKDNFTIGITAPSSGIPENCHHFMDEIKERFKDVNLIIGDTVMTQYKAKSSHMN
CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHH
KRAKELNEFLQREDIDIIIPPWGGELAIEVIDKIDYANIQPKWIMGYSDTSLILLAITLN
HHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEEC
TGIATAHGTNIVDLRGKYSDKTTSAWERVLKLQRNEEIVQYSSEMFQNSWTHHIPTDYIF
CCEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHEE
NFTEQTKWKSLSGNNVKIEGRLLGGCIDVISHIVGTPYGDVNRFRNEYIGEEPILWYLEN
ECCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEC
CESSSVTCRRMLLQMKYAGWFDNVSGIIFGRTQVDEAVDGYTMIDVYEDIADELDIPILY
CCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCEEEEHHHHHHHHHCCCCEEE
DVDCGHQPPQITFINGAYGIVEFDNGKGKVTQKFI
ECCCCCCCCEEEEECCCEEEEEEECCCCCEECCCC
>Mature Secondary Structure
MIKYPTLKDNFTIGITAPSSGIPENCHHFMDEIKERFKDVNLIIGDTVMTQYKAKSSHMN
CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHH
KRAKELNEFLQREDIDIIIPPWGGELAIEVIDKIDYANIQPKWIMGYSDTSLILLAITLN
HHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEEC
TGIATAHGTNIVDLRGKYSDKTTSAWERVLKLQRNEEIVQYSSEMFQNSWTHHIPTDYIF
CCEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHEE
NFTEQTKWKSLSGNNVKIEGRLLGGCIDVISHIVGTPYGDVNRFRNEYIGEEPILWYLEN
ECCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEC
CESSSVTCRRMLLQMKYAGWFDNVSGIIFGRTQVDEAVDGYTMIDVYEDIADELDIPILY
CCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCEEEEHHHHHHHHHCCCCEEE
DVDCGHQPPQITFINGAYGIVEFDNGKGKVTQKFI
ECCCCCCCCEEEEECCCEEEEEEECCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]