Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

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The map label for this gene is ydhK [H]

Identifier: 222150494

GI number: 222150494

Start: 245512

End: 246054

Strand: Direct

Name: ydhK [H]

Synonym: MCCL_0244

Alternate gene names: 222150494

Gene position: 245512-246054 (Clockwise)

Preceding gene: 222150493

Following gene: 222150496

Centisome position: 11.68

GC content: 33.33

Gene sequence:

>543_bases
ATGATGAAAAAATTGAGCTTAATTATAGTAGCTTCAGGATTAGTATTATCAGCTTGTTCAACTGGTGAGGAAGAAGAAAA
TTCTAAAGATCAAAAACAAGAAAAACATATGAATCATAAGAGTGAAAGTAAAGCCCCAGATAATATGAAAAGTACAGATG
ACAGTAAATATAAAAAGGACGATAAAATAACAATTACAGCTGATCATATGCCTGGTACGAAAAATGCCAAAGGTACTGTG
AAAGGTGCTTATAAAACGTATGCTTATGTCGTGAGTTACACACCTACAAATGGTGATGAAAAAGTTAATAATCACAAATG
GGTCGTTAATGAGGAAGTTGCAGATGCCCCTGAAAATGGATTCAAGAAAGGTGATACAGTTAAATTAGAAGCTGACCATA
TGCCTGGTATGAAAGGTGCAGAAGCTCAAATTGATGATGTAGAAAAAACAACCGTTTATATGGTGGATTATAAATCAACA
GAAAACGATGAGATGGTTAAAAATCATAAATGGATGACAACTGACGAACTAAAATCTCGTTAA

Upstream 100 bases:

>100_bases
TTTGCCTATGATAATCCAAGATAAAACATTCTTGAGCATGAAGATAATGGAATGATGGGACAAATAAAAGTAACAAAATA
ATTTATAAGGAGAATTCAAT

Downstream 100 bases:

>100_bases
TGTATATCATTTTAAAGCTTTAAAGTATTTAGTTAGTTATTCACAAATGCAATATGAATTCCCTTTGTTAAGTAGACAAG
CAAATAAATAAAATTTATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MMKKLSLIIVASGLVLSACSTGEEEENSKDQKQEKHMNHKSESKAPDNMKSTDDSKYKKDDKITITADHMPGTKNAKGTV
KGAYKTYAYVVSYTPTNGDEKVNNHKWVVNEEVADAPENGFKKGDTVKLEADHMPGMKGAEAQIDDVEKTTVYMVDYKST
ENDEMVKNHKWMTTDELKSR

Sequences:

>Translated_180_residues
MMKKLSLIIVASGLVLSACSTGEEEENSKDQKQEKHMNHKSESKAPDNMKSTDDSKYKKDDKITITADHMPGTKNAKGTV
KGAYKTYAYVVSYTPTNGDEKVNNHKWVVNEEVADAPENGFKKGDTVKLEADHMPGMKGAEAQIDDVEKTTVYMVDYKST
ENDEMVKNHKWMTTDELKSR
>Mature_180_residues
MMKKLSLIIVASGLVLSACSTGEEEENSKDQKQEKHMNHKSESKAPDNMKSTDDSKYKKDDKITITADHMPGTKNAKGTV
KGAYKTYAYVVSYTPTNGDEKVNNHKWVVNEEVADAPENGFKKGDTVKLEADHMPGMKGAEAQIDDVEKTTVYMVDYKST
ENDEMVKNHKWMTTDELKSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011438 [H]

Pfam domain/function: PF07563 DUF1541 [H]

EC number: NA

Molecular weight: Translated: 20185; Mature: 20185

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKLSLIIVASGLVLSACSTGEEEENSKDQKQEKHMNHKSESKAPDNMKSTDDSKYKKD
CCCCEEEEEEECCHHEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
DKITITADHMPGTKNAKGTVKGAYKTYAYVVSYTPTNGDEKVNNHKWVVNEEVADAPENG
CEEEEEECCCCCCCCCCCEEEECEEEEEEEEEECCCCCCCCCCCCCEEEECHHHCCCCCC
FKKGDTVKLEADHMPGMKGAEAQIDDVEKTTVYMVDYKSTENDEMVKNHKWMTTDELKSR
CCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHCCCCCCHHHHHCC
>Mature Secondary Structure
MMKKLSLIIVASGLVLSACSTGEEEENSKDQKQEKHMNHKSESKAPDNMKSTDDSKYKKD
CCCCEEEEEEECCHHEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
DKITITADHMPGTKNAKGTVKGAYKTYAYVVSYTPTNGDEKVNNHKWVVNEEVADAPENG
CEEEEEECCCCCCCCCCCEEEECEEEEEEEEEECCCCCCCCCCCCCEEEECHHHCCCCCC
FKKGDTVKLEADHMPGMKGAEAQIDDVEKTTVYMVDYKSTENDEMVKNHKWMTTDELKSR
CCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]