| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is nreB [H]
Identifier: 222150391
GI number: 222150391
Start: 146952
End: 147983
Strand: Direct
Name: nreB [H]
Synonym: MCCL_0141
Alternate gene names: 222150391
Gene position: 146952-147983 (Clockwise)
Preceding gene: 222150390
Following gene: 222150392
Centisome position: 6.99
GC content: 35.56
Gene sequence:
>1032_bases GTGTCGAAGCTTGAGCATGAAGTAAATGATGATGGATTGGTTGATGCCTTTTATAACGATACCGATGAACTCATCATATT TATAGATGAAAAGAACAATATACTCACAATGAATCAAGCCGCTCAAAAAGTGATTGATTTACATGATAATATTGATGGTC TGACAAGAAATCTTTGTCGCACATGTTTAGGAGTTACAAGTGAAAATGCAATAATGGAGTGCAGGGACTGTTTTATTAAA CGTGAACAAAATAATCAGTCGTTTCAATTATTTCTAAAAGATGAAAATGGGGAACCTAAACCGTATTCAGCATCTTACGT CGTGCTAAAAGAAAATAACGGCACTAAAGTACTGACATTGCAAAATATTTCCCAGCAAATAAAAACGCAGGAAATTCTTC ATCAGAAAACAATTACACAAAAAATTATTAGTGCGCAGGAAAATGAAAGAAAAAGAATCTCACGAGAATTGCATGATAGT GTGATTCAAGAGTTGCTTAATGTATCTGTTGACATTCGTTTGATGAAATATAAAACTGAAGAAGAGAAAGAGAAGCATCT TCAGATGATGGAAGGTTCAATCGCACGACTAATGGATGATATACGCAATCTATCCTTAGAGTTGAGGCCTTCTTCTTTGG ATGATCTGGGTTTAGTAGCAGCATTTAACTCTCATTTTAAGCAACTTGAAAAGAGCTATGGCCTTGAAGTTAATATGGAT GAGGATATAGGCAACATTCGTTTTTCTAATGAGATAGAAACAGCAGTATACAGAATTACACAAGAAGCAATACTAAATGC CTTAAAATATGCGAATGTCGATGAAGTAAATGTATTTATACAAAAAGATGAAACTGAATTAACAGTAGAAATTAGCGACA GTGGAGATGGGTTTACACCAGGAGATACACCAAAAGGATCTGGACTCGGATTCTTTGGTATGCAAGAACGTGCGGCTATC GTCAATGGGCATGTTGAGATTAATAGCGAAACAGGAAAAGGTACGTTTGTAACGTTAACCATCCCACTCTAG
Upstream 100 bases:
>100_bases AATAGAAGTAAACGTCCGTTTACTTTAACGATGCATGAACAGCTCAAAAAAAATCTTGAGCAAGGACTCGGTGCTTTTTA TTGTAAGGATGTGATCAATA
Downstream 100 bases:
>100_bases GGGGATAAATATGAAGATTGTAATTGCGGATGATCATGCAGTTGTGCGTACGGGATTCTCGATGATTTTGAACTATCAAG ACAATATGGAAGTTGTTGCA
Product: two-component sensor histidine kinase
Products: NA
Alternate protein names: Nitrogen regulation protein B [H]
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MSKLEHEVNDDGLVDAFYNDTDELIIFIDEKNNILTMNQAAQKVIDLHDNIDGLTRNLCRTCLGVTSENAIMECRDCFIK REQNNQSFQLFLKDENGEPKPYSASYVVLKENNGTKVLTLQNISQQIKTQEILHQKTITQKIISAQENERKRISRELHDS VIQELLNVSVDIRLMKYKTEEEKEKHLQMMEGSIARLMDDIRNLSLELRPSSLDDLGLVAAFNSHFKQLEKSYGLEVNMD EDIGNIRFSNEIETAVYRITQEAILNALKYANVDEVNVFIQKDETELTVEISDSGDGFTPGDTPKGSGLGFFGMQERAAI VNGHVEINSETGKGTFVTLTIPL
Sequences:
>Translated_343_residues MSKLEHEVNDDGLVDAFYNDTDELIIFIDEKNNILTMNQAAQKVIDLHDNIDGLTRNLCRTCLGVTSENAIMECRDCFIK REQNNQSFQLFLKDENGEPKPYSASYVVLKENNGTKVLTLQNISQQIKTQEILHQKTITQKIISAQENERKRISRELHDS VIQELLNVSVDIRLMKYKTEEEKEKHLQMMEGSIARLMDDIRNLSLELRPSSLDDLGLVAAFNSHFKQLEKSYGLEVNMD EDIGNIRFSNEIETAVYRITQEAILNALKYANVDEVNVFIQKDETELTVEISDSGDGFTPGDTPKGSGLGFFGMQERAAI VNGHVEINSETGKGTFVTLTIPL >Mature_342_residues SKLEHEVNDDGLVDAFYNDTDELIIFIDEKNNILTMNQAAQKVIDLHDNIDGLTRNLCRTCLGVTSENAIMECRDCFIKR EQNNQSFQLFLKDENGEPKPYSASYVVLKENNGTKVLTLQNISQQIKTQEILHQKTITQKIISAQENERKRISRELHDSV IQELLNVSVDIRLMKYKTEEEKEKHLQMMEGSIARLMDDIRNLSLELRPSSLDDLGLVAAFNSHFKQLEKSYGLEVNMDE DIGNIRFSNEIETAVYRITQEAILNALKYANVDEVNVFIQKDETELTVEISDSGDGFTPGDTPKGSGLGFFGMQERAAIV NGHVEINSETGKGTFVTLTIPL
Specific function: Member of the two-component regulatory system nreB/nreC involved in the control of dissimilatory nitrate/nitrite reduction in response to oxygen. NreB functions as a direct oxygen sensor histidine kinase which is autophosphorylated, in the absence of oxyg
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788812, Length=197, Percent_Identity=27.9187817258883, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787474, Length=217, Percent_Identity=23.963133640553, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI87082311, Length=232, Percent_Identity=25, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR011712 - InterPro: IPR005467 - InterPro: IPR017203 [H]
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 38855; Mature: 38724
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLEHEVNDDGLVDAFYNDTDELIIFIDEKNNILTMNQAAQKVIDLHDNIDGLTRNLCR CCCCCCCCCCCCEEEHEECCCCEEEEEEECCCCEEEHHHHHHHHHHHHCCHHHHHHHHHH TCLGVTSENAIMECRDCFIKREQNNQSFQLFLKDENGEPKPYSASYVVLKENNGTKVLTL HHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEE QNISQQIKTQEILHQKTITQKIISAQENERKRISRELHDSVIQELLNVSVDIRLMKYKTE HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCH EEKEKHLQMMEGSIARLMDDIRNLSLELRPSSLDDLGLVAAFNSHFKQLEKSYGLEVNMD HHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEC EDIGNIRFSNEIETAVYRITQEAILNALKYANVDEVNVFIQKDETELTVEISDSGDGFTP CCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCCCC GDTPKGSGLGFFGMQERAAIVNGHVEINSETGKGTFVTLTIPL CCCCCCCCCEECCCCCCCEEEECEEEEECCCCCEEEEEEEECC >Mature Secondary Structure SKLEHEVNDDGLVDAFYNDTDELIIFIDEKNNILTMNQAAQKVIDLHDNIDGLTRNLCR CCCCCCCCCCCEEEHEECCCCEEEEEEECCCCEEEHHHHHHHHHHHHCCHHHHHHHHHH TCLGVTSENAIMECRDCFIKREQNNQSFQLFLKDENGEPKPYSASYVVLKENNGTKVLTL HHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEE QNISQQIKTQEILHQKTITQKIISAQENERKRISRELHDSVIQELLNVSVDIRLMKYKTE HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCH EEKEKHLQMMEGSIARLMDDIRNLSLELRPSSLDDLGLVAAFNSHFKQLEKSYGLEVNMD HHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEC EDIGNIRFSNEIETAVYRITQEAILNALKYANVDEVNVFIQKDETELTVEISDSGDGFTP CCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCCCC GDTPKGSGLGFFGMQERAAIVNGHVEINSETGKGTFVTLTIPL CCCCCCCCCEECCCCCCCEEEECEEEEECCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA