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The map label for this gene is hslR [H]

Identifier: 222111266

GI number: 222111266

Start: 2227577

End: 2227981

Strand: Direct

Name: hslR [H]

Synonym: Dtpsy_2075

Alternate gene names: 222111266

Gene position: 2227577-2227981 (Clockwise)

Preceding gene: 222111265

Following gene: 222111269

Centisome position: 58.67

GC content: 73.58

Gene sequence:

>405_bases
ATGCGCCTGGACAAATGGCTGTGGTGCGCGCGCTTTTACAAGACCCGCAGCCTCGCCGTGGAAGAGATCGGCAAAGGCCG
CATAACCGTCAACGGCCAGGCGGCCAAAGCCGCGCGTGAGCTGCGCGCGGGCGACACCGTCGCGCTGCGCCAGGGCGCGG
TCGCCCGCACGGTCGTGGTGCGCGCCTTGAGCAACTTCCGCGGCCCGGCGCCCGTGGCGCAGCAGCTCTATGAGGAAACG
CCCGAGAGCCTCGCCGCGCGCGCCCAGGCCGCCGAGGCGCGCCGCCTGGCGCCCGAGCCAGCCGCCGCGCTGCGCGAGGG
CCGCCCCACCAAGCGCGACCGCCGCTCCATGGACCACCTGCGCCATGACTGGGACGACCGCTGGAGCGCCTCCATCGACG
ACTGA

Upstream 100 bases:

>100_bases
CTGGACGCCGTGGTGCGGCTGCCACTGGCCGACGCCTGAACCGTTTTTCACGCACGCCGCCCCAGGCAAAATCACGCAGA
TGACGACACCACCCGATGCA

Downstream 100 bases:

>100_bases
GATGGGCAAGGCTTGGGCACAGCGCCGCAGCCTGTGGCAGCCAGCCGCCGCCCCACGACGCGAAAGCACAGCGCGCCCAC
ACGGGCCGTGCGCGCTATGC

Product: RNA-binding s4 domain-containing protein

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MRLDKWLWCARFYKTRSLAVEEIGKGRITVNGQAAKAARELRAGDTVALRQGAVARTVVVRALSNFRGPAPVAQQLYEET
PESLAARAQAAEARRLAPEPAAALREGRPTKRDRRSMDHLRHDWDDRWSASIDD

Sequences:

>Translated_134_residues
MRLDKWLWCARFYKTRSLAVEEIGKGRITVNGQAAKAARELRAGDTVALRQGAVARTVVVRALSNFRGPAPVAQQLYEET
PESLAARAQAAEARRLAPEPAAALREGRPTKRDRRSMDHLRHDWDDRWSASIDD
>Mature_134_residues
MRLDKWLWCARFYKTRSLAVEEIGKGRITVNGQAAKAARELRAGDTVALRQGAVARTVVVRALSNFRGPAPVAQQLYEET
PESLAARAQAAEARRLAPEPAAALREGRPTKRDRRSMDHLRHDWDDRWSASIDD

Specific function: Involved in the recycling of free 50S ribosomal subunits that still carry a nascent chain. Binds RNA more specifically than DNA. Binds with very high affinity to the free 50S ribosomal subunit. Does not bind it when it is part of the 70S ribosome [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=126, Percent_Identity=45.2380952380952, Blast_Score=100, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 15049; Mature: 15049

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLDKWLWCARFYKTRSLAVEEIGKGRITVNGQAAKAARELRAGDTVALRQGAVARTVVV
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHCCCHHHHHCCHHHHHHHH
RALSNFRGPAPVAQQLYEETPESLAARAQAAEARRLAPEPAAALREGRPTKRDRRSMDHL
HHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHH
RHDWDDRWSASIDD
HHCCCCCCCCCCCC
>Mature Secondary Structure
MRLDKWLWCARFYKTRSLAVEEIGKGRITVNGQAAKAARELRAGDTVALRQGAVARTVVV
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHCCCHHHHHCCHHHHHHHH
RALSNFRGPAPVAQQLYEETPESLAARAQAAEARRLAPEPAAALREGRPTKRDRRSMDHL
HHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHH
RHDWDDRWSASIDD
HHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]