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The map label for this gene is ycbZ [H]

Identifier: 222111245

GI number: 222111245

Start: 2199095

End: 2201548

Strand: Direct

Name: ycbZ [H]

Synonym: Dtpsy_2053

Alternate gene names: 222111245

Gene position: 2199095-2201548 (Clockwise)

Preceding gene: 222111244

Following gene: 222111246

Centisome position: 57.92

GC content: 70.42

Gene sequence:

>2454_bases
ATGAGCGCGCCCTGCACGGCACTCGCACCCGGCCAGCTGCGCCTGAGCATCCGCCCCGAGAGCCTGGGCTTTGACGACAC
GCGCGCGCTGGTGGCCGAGCCCCTGCCGTGGATCGGCCAGCAGCGCGCGTTCGATGCGGCCCGGTTCGGGCTGACCATGC
AACAGCCGGACTACCACCTGTTCGTGCTGGGTGAGGTCGGCAGCGGCCGTGCGTCGCTGATGCGCCAGGCCATGGACGAA
GCGGCCGCCAGCCGGCCCGTGCCGCCGGACTTGTGCTTTCTGCACGACTTTGACGCACCCGAACGTCCACGCGCCCTGCG
CCTGCCCGCGGGCCAGGGGCGCCAGCTGCGCGACCAGATGGCGAGCTGGAGCCGCCAGCTGGAGGCGGAGATCCCCAAGC
GCCTGGCTGCGCCGGACGTGAAGAACGAGCGCGAGCGCATCCACAAGCGCTACCAGAGCGACGAGGCGCGCGCCTTCAGC
CAGTTGGCCGACTTCGCGCGTGCACGGCGGTTTCGCCTGTCGCGTGAACAAGGGCAGATGGTGTTCACCCTGCTGGGCCC
GGGCGGCGAGCCGCTGACGGAGGCCGATGGCGCAGCGCTCGGCGCACCCGAGCGCGCCGCCATCGAGCTGGCCGAGCAGG
AACTGCGCGCCGAGATCGTGCGCTTCCTGGAACAGACCCGCCCGCTGGAGCGCGCGCGCGACGATGCGCTGGCGCAGCTT
CTGCGCCAGAGCGCCGGCCCGCTGGTGACGCACGGTCTGGACGACATCCGCCAGGGCCTGCGCAAGCAGATCAAGGACGC
GGTCAAGCTGGGACGCTGGCTCGACCAGGTGCAGCGCGAGGTGCTCGACGACCTTGAGCTCTTCGTGCCTCACGAAGGCG
AGCAGCCCGACGATCCGCAGGAAGAGGAACGCCGCGACCAACTGGCCAACCTGCTGGCGCTGTGCCAGGTGAACCTGGCG
GTGGACAACGCTTCCCTGAAAGGCGCGCCAGTGGTGGTCGAAGACAACCCGCAGCTGCGCAACCTGTTCGGCCACATCCA
GTACGAATCCGGGGAAGACGCGCCGTATGCCGATTTCTCCAGCATCCACGCCGGCGGCCTGCTGCGTGCGCACGGCGGCT
ACCTGATGCTGTTCCTGCGCGACCTGCTGGGCGATACGCCGCTGTGGGAACGGCTGCGCCGCTTCCTGCGCTGCAGCCGC
CTGGCGGTCGAGGACACCGCCGCCAGCCATGGCGGTGGTGGGCCGACAGTGGCGCTGCAGCCCGAGGGGGTGGATGTGGA
GGTCAAGCTCGTGCTGATCGGCACCGCCGTCGAGTATTACGTGCTGCAGGAGGGCGACGAAGACCTGGCGCAGCGCTTTC
GCGTGAAGGTGGATTTTGCCGAGCGCTTCACCGCCAGCGCCCAGACGCATTACGCCAGCGCCGTGTTCATCGCGCGCGCG
TGCGCCCGCCGCGGCCTGCCGCACTGCAGCGCCGCGGCCGTGGCCCGCCTGCTGGAATTCACCCACCGCGAGGCCGACGA
CCAGTCGCGCCAGAGCGCGCGCTTTTCCCTGCTGGAAGCCCTGCTGCTCGAAAGCGCGGCCCAGGCGCGGGCACGCGGCG
CGGCGCAGACCGATGCGGCCGACGTGGAAGCCGCACTGATCGCCAAGCGCCAGCGCCACAACGCCCCCGAGGAGGCATTG
CACGAATCGATTGCCGAGGGCGAGTTGCTCATCACGCTGGACGGCACGCGCGTCGGCCAGTTGAATGCGCTCACGCAGAT
CGACCTGGGCGACTACCGCTTCGGCTTTCCGGTGCGCATCACCGCGCGCACGCATGCGGGCCAAGAAGGCCTGGTCAACA
TCGAGCGCGAGGTCGAGCTGTCCGGCCCGATCCACGACAAGGGCGTGCTCATCCTGCACAGTTATTTCAGCGCGCTGTTC
GGACACCTGGCGCCGCTGGCGCTCAACGCGTCCATCGTGCTGGAGCAGGAGTACAGCGGCATTGAGGGCGACTCGGCCTC
CTGCGCCGAGCTGTATGCCCTGCTGTCGTCGCTGTCGGGCCTGCCGCTGCGCCAGGACATCGCGGTTACCGGCGCGCTCA
ACCAGCACGGTGAGGTGCTGCCCGTGGGCGGGCTGAACGAGAAGATCGAGGGCTGGTTCCGCGTGTGCGCGCACGCGGGC
CTGACCGGCACGCAGGGCGTGCTAATTCCGGCACGCAACCAGCGCCACCTGATGCTCTCGCCCGCCGTGGTAGATGCGGT
CGCGGCGGGGCGCTTTCACGTCTATACGGCGCAGCACGTCAGCGAGGGCATTGCGCTGCTCACTGGTACGCACGCGGGCC
TCACCCCCGGCGAGCCGTGGGAAGGCAGCGTGCGGGCGCGCGCCGAAAGCACGCTGCTGGCCTACCGCCGCGCGTGGCAG
GCCATGGCGCTGGGGCGGCGGCGCGTGCCGCGCAGGCTCGGCAGCGGCCTCTGA

Upstream 100 bases:

>100_bases
GCCAGGACTTCCGCTACATCCCCTGCCTGAACGACAACCCCGCCTGGATCACTGCCTTGAGCCGCATCGCACAACAGCAC
CTGGCGGGCTGGAGCCAGCC

Downstream 100 bases:

>100_bases
AAGCCGCCCGGCGCCGCGGTGGGCCGGGCCTGGCTTATCCATATTGGCTATAAGAACAATCCGATTCTGTCGTTGATGAG
GCTCAAGGGCGCGGGACAAT

Product: ATP-dependent protease la

Products: NA

Alternate protein names: ATP-dependent protease La homolog [H]

Number of amino acids: Translated: 817; Mature: 816

Protein sequence:

>817_residues
MSAPCTALAPGQLRLSIRPESLGFDDTRALVAEPLPWIGQQRAFDAARFGLTMQQPDYHLFVLGEVGSGRASLMRQAMDE
AAASRPVPPDLCFLHDFDAPERPRALRLPAGQGRQLRDQMASWSRQLEAEIPKRLAAPDVKNERERIHKRYQSDEARAFS
QLADFARARRFRLSREQGQMVFTLLGPGGEPLTEADGAALGAPERAAIELAEQELRAEIVRFLEQTRPLERARDDALAQL
LRQSAGPLVTHGLDDIRQGLRKQIKDAVKLGRWLDQVQREVLDDLELFVPHEGEQPDDPQEEERRDQLANLLALCQVNLA
VDNASLKGAPVVVEDNPQLRNLFGHIQYESGEDAPYADFSSIHAGGLLRAHGGYLMLFLRDLLGDTPLWERLRRFLRCSR
LAVEDTAASHGGGGPTVALQPEGVDVEVKLVLIGTAVEYYVLQEGDEDLAQRFRVKVDFAERFTASAQTHYASAVFIARA
CARRGLPHCSAAAVARLLEFTHREADDQSRQSARFSLLEALLLESAAQARARGAAQTDAADVEAALIAKRQRHNAPEEAL
HESIAEGELLITLDGTRVGQLNALTQIDLGDYRFGFPVRITARTHAGQEGLVNIEREVELSGPIHDKGVLILHSYFSALF
GHLAPLALNASIVLEQEYSGIEGDSASCAELYALLSSLSGLPLRQDIAVTGALNQHGEVLPVGGLNEKIEGWFRVCAHAG
LTGTQGVLIPARNQRHLMLSPAVVDAVAAGRFHVYTAQHVSEGIALLTGTHAGLTPGEPWEGSVRARAESTLLAYRRAWQ
AMALGRRRVPRRLGSGL

Sequences:

>Translated_817_residues
MSAPCTALAPGQLRLSIRPESLGFDDTRALVAEPLPWIGQQRAFDAARFGLTMQQPDYHLFVLGEVGSGRASLMRQAMDE
AAASRPVPPDLCFLHDFDAPERPRALRLPAGQGRQLRDQMASWSRQLEAEIPKRLAAPDVKNERERIHKRYQSDEARAFS
QLADFARARRFRLSREQGQMVFTLLGPGGEPLTEADGAALGAPERAAIELAEQELRAEIVRFLEQTRPLERARDDALAQL
LRQSAGPLVTHGLDDIRQGLRKQIKDAVKLGRWLDQVQREVLDDLELFVPHEGEQPDDPQEEERRDQLANLLALCQVNLA
VDNASLKGAPVVVEDNPQLRNLFGHIQYESGEDAPYADFSSIHAGGLLRAHGGYLMLFLRDLLGDTPLWERLRRFLRCSR
LAVEDTAASHGGGGPTVALQPEGVDVEVKLVLIGTAVEYYVLQEGDEDLAQRFRVKVDFAERFTASAQTHYASAVFIARA
CARRGLPHCSAAAVARLLEFTHREADDQSRQSARFSLLEALLLESAAQARARGAAQTDAADVEAALIAKRQRHNAPEEAL
HESIAEGELLITLDGTRVGQLNALTQIDLGDYRFGFPVRITARTHAGQEGLVNIEREVELSGPIHDKGVLILHSYFSALF
GHLAPLALNASIVLEQEYSGIEGDSASCAELYALLSSLSGLPLRQDIAVTGALNQHGEVLPVGGLNEKIEGWFRVCAHAG
LTGTQGVLIPARNQRHLMLSPAVVDAVAAGRFHVYTAQHVSEGIALLTGTHAGLTPGEPWEGSVRARAESTLLAYRRAWQ
AMALGRRRVPRRLGSGL
>Mature_816_residues
SAPCTALAPGQLRLSIRPESLGFDDTRALVAEPLPWIGQQRAFDAARFGLTMQQPDYHLFVLGEVGSGRASLMRQAMDEA
AASRPVPPDLCFLHDFDAPERPRALRLPAGQGRQLRDQMASWSRQLEAEIPKRLAAPDVKNERERIHKRYQSDEARAFSQ
LADFARARRFRLSREQGQMVFTLLGPGGEPLTEADGAALGAPERAAIELAEQELRAEIVRFLEQTRPLERARDDALAQLL
RQSAGPLVTHGLDDIRQGLRKQIKDAVKLGRWLDQVQREVLDDLELFVPHEGEQPDDPQEEERRDQLANLLALCQVNLAV
DNASLKGAPVVVEDNPQLRNLFGHIQYESGEDAPYADFSSIHAGGLLRAHGGYLMLFLRDLLGDTPLWERLRRFLRCSRL
AVEDTAASHGGGGPTVALQPEGVDVEVKLVLIGTAVEYYVLQEGDEDLAQRFRVKVDFAERFTASAQTHYASAVFIARAC
ARRGLPHCSAAAVARLLEFTHREADDQSRQSARFSLLEALLLESAAQARARGAAQTDAADVEAALIAKRQRHNAPEEALH
ESIAEGELLITLDGTRVGQLNALTQIDLGDYRFGFPVRITARTHAGQEGLVNIEREVELSGPIHDKGVLILHSYFSALFG
HLAPLALNASIVLEQEYSGIEGDSASCAELYALLSSLSGLPLRQDIAVTGALNQHGEVLPVGGLNEKIEGWFRVCAHAGL
TGTQGVLIPARNQRHLMLSPAVVDAVAAGRFHVYTAQHVSEGIALLTGTHAGLTPGEPWEGSVRARAESTLLAYRRAWQA
MALGRRRVPRRLGSGL

Specific function: Unknown

COG id: COG1067

COG function: function code O; Predicted ATP-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S16 family [H]

Homologues:

Organism=Escherichia coli, GI1787188, Length=443, Percent_Identity=31.6027088036117, Blast_Score=196, Evalue=4e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008269
- InterPro:   IPR001984
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 89529; Mature: 89397

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPCTALAPGQLRLSIRPESLGFDDTRALVAEPLPWIGQQRAFDAARFGLTMQQPDYHL
CCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCEEECCCEEE
FVLGEVGSGRASLMRQAMDEAAASRPVPPDLCFLHDFDAPERPRALRLPAGQGRQLRDQM
EEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEECCCCCCHHHHHHH
ASWSRQLEAEIPKRLAAPDVKNERERIHKRYQSDEARAFSQLADFARARRFRLSREQGQM
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCE
VFTLLGPGGEPLTEADGAALGAPERAAIELAEQELRAEIVRFLEQTRPLERARDDALAQL
EEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LRQSAGPLVTHGLDDIRQGLRKQIKDAVKLGRWLDQVQREVLDDLELFVPHEGEQPDDPQ
HHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCH
EEERRDQLANLLALCQVNLAVDNASLKGAPVVVEDNPQLRNLFGHIQYESGEDAPYADFS
HHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEECCCCHHHHHHHEEEECCCCCCCCCCHH
SIHAGGLLRAHGGYLMLFLRDLLGDTPLWERLRRFLRCSRLAVEDTAASHGGGGPTVALQ
HHCCCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
PEGVDVEVKLVLIGTAVEYYVLQEGDEDLAQRFRVKVDFAERFTASAQTHYASAVFIARA
CCCCCEEEEEEEEECEEEEEEEECCCHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHH
CARRGLPHCSAAAVARLLEFTHREADDQSRQSARFSLLEALLLESAAQARARGAAQTDAA
HHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
DVEAALIAKRQRHNAPEEALHESIAEGELLITLDGTRVGQLNALTQIDLGDYRFGFPVRI
HHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCEECCCCEEE
TARTHAGQEGLVNIEREVELSGPIHDKGVLILHSYFSALFGHLAPLALNASIVLEQEYSG
EEECCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
IEGDSASCAELYALLSSLSGLPLRQDIAVTGALNQHGEVLPVGGLNEKIEGWFRVCAHAG
CCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHHHCC
LTGTQGVLIPARNQRHLMLSPAVVDAVAAGRFHVYTAQHVSEGIALLTGTHAGLTPGEPW
CCCCCEEEEECCCCCEEEECHHHHHHHHCCCEEEEEHHHHHCCEEEEECCCCCCCCCCCC
EGSVRARAESTLLAYRRAWQAMALGRRRVPRRLGSGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SAPCTALAPGQLRLSIRPESLGFDDTRALVAEPLPWIGQQRAFDAARFGLTMQQPDYHL
CCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCEEECCCEEE
FVLGEVGSGRASLMRQAMDEAAASRPVPPDLCFLHDFDAPERPRALRLPAGQGRQLRDQM
EEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEECCCCCCHHHHHHH
ASWSRQLEAEIPKRLAAPDVKNERERIHKRYQSDEARAFSQLADFARARRFRLSREQGQM
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCE
VFTLLGPGGEPLTEADGAALGAPERAAIELAEQELRAEIVRFLEQTRPLERARDDALAQL
EEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LRQSAGPLVTHGLDDIRQGLRKQIKDAVKLGRWLDQVQREVLDDLELFVPHEGEQPDDPQ
HHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCH
EEERRDQLANLLALCQVNLAVDNASLKGAPVVVEDNPQLRNLFGHIQYESGEDAPYADFS
HHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEECCCCHHHHHHHEEEECCCCCCCCCCHH
SIHAGGLLRAHGGYLMLFLRDLLGDTPLWERLRRFLRCSRLAVEDTAASHGGGGPTVALQ
HHCCCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
PEGVDVEVKLVLIGTAVEYYVLQEGDEDLAQRFRVKVDFAERFTASAQTHYASAVFIARA
CCCCCEEEEEEEEECEEEEEEEECCCHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHH
CARRGLPHCSAAAVARLLEFTHREADDQSRQSARFSLLEALLLESAAQARARGAAQTDAA
HHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
DVEAALIAKRQRHNAPEEALHESIAEGELLITLDGTRVGQLNALTQIDLGDYRFGFPVRI
HHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCEECCCCEEE
TARTHAGQEGLVNIEREVELSGPIHDKGVLILHSYFSALFGHLAPLALNASIVLEQEYSG
EEECCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
IEGDSASCAELYALLSSLSGLPLRQDIAVTGALNQHGEVLPVGGLNEKIEGWFRVCAHAG
CCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHHHCC
LTGTQGVLIPARNQRHLMLSPAVVDAVAAGRFHVYTAQHVSEGIALLTGTHAGLTPGEPW
CCCCCEEEEECCCCCEEEECHHHHHHHHCCCEEEEEHHHHHCCEEEEECCCCCCCCCCCC
EGSVRARAESTLLAYRRAWQAMALGRRRVPRRLGSGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]