| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is guaD [H]
Identifier: 222111201
GI number: 222111201
Start: 2146474
End: 2146941
Strand: Direct
Name: guaD [H]
Synonym: Dtpsy_2009
Alternate gene names: 222111201
Gene position: 2146474-2146941 (Clockwise)
Preceding gene: 222111194
Following gene: 222111202
Centisome position: 56.54
GC content: 74.36
Gene sequence:
>468_bases ATGTCCACCGATACCGCCCTGCTGCGCCGGGCCGTGCACCTGGCCCATGACAACCGGGCCCGCGGGGGCCGGCCCTTCGG CGCGGTGATCGCGCGCGGCGGCGAGGTGATCGCCACCGGCGTGAACGACATCGTGCACAGCCACGACCCCAGTACCCACG CCGAGATGCAGGCCCTGCGCGCCGCAACACGCCAGCGGGCGAACCCCAGCCTGGCGGGCTGCACGGTCTACGCCAGCGGC CACCCCTGCCCCATGTGCCTGGCGGCGCTGGTCATGGCCGGCGCGGACAGGGTGTTCTACGCCTTCGACAACCGCGACGC CGCGCCCTACGGCCTGTCCAGCGAAGGCGCCTACCAGCGCCTGCGGCTGCCGCTGGACCCGCCGCCCCTGCCGCTGCAAC GCCTGGCCACGGGCATTGGCGTGGAGCAACTCTACGGCGACGCGCCCTGGCCCACGGACGGCCCCTGA
Upstream 100 bases:
>100_bases TCACATGCGTGATTCATCGGCAGGGTTTTTGTGTTCAAAGGACAATCCGGGCGCGGAGCCCGCGGGGAAAGCGGGGGCCG CTCATTTTTCAGGAGTTCCC
Downstream 100 bases:
>100_bases CACCCCTGACCACAGCGCCGCAGGGGCCGGTGCCGGCCCCTGCGTATAGGAATGTCTGGCGACGGTGGCGCTGGCCACGC TGAACCGGGGCCCCCTTCCC
Product: zinc-binding CMP/dCMP deaminase
Products: NA
Alternate protein names: GDEase; Guanase; Guanine aminase; Guanine aminohydrolase; GAH [H]
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSTDTALLRRAVHLAHDNRARGGRPFGAVIARGGEVIATGVNDIVHSHDPSTHAEMQALRAATRQRANPSLAGCTVYASG HPCPMCLAALVMAGADRVFYAFDNRDAAPYGLSSEGAYQRLRLPLDPPPLPLQRLATGIGVEQLYGDAPWPTDGP
Sequences:
>Translated_155_residues MSTDTALLRRAVHLAHDNRARGGRPFGAVIARGGEVIATGVNDIVHSHDPSTHAEMQALRAATRQRANPSLAGCTVYASG HPCPMCLAALVMAGADRVFYAFDNRDAAPYGLSSEGAYQRLRLPLDPPPLPLQRLATGIGVEQLYGDAPWPTDGP >Mature_154_residues STDTALLRRAVHLAHDNRARGGRPFGAVIARGGEVIATGVNDIVHSHDPSTHAEMQALRAATRQRANPSLAGCTVYASGH PCPMCLAALVMAGADRVFYAFDNRDAAPYGLSSEGAYQRLRLPLDPPPLPLQRLATGIGVEQLYGDAPWPTDGP
Specific function: Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia [H]
COG id: COG0590
COG function: function code FJ; Cytosine/adenosine deaminases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]
Homologues:
Organism=Caenorhabditis elegans, GI17554608, Length=132, Percent_Identity=32.5757575757576, Blast_Score=91, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17555996, Length=115, Percent_Identity=33.9130434782609, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016192 - InterPro: IPR002125 - InterPro: IPR016193 [H]
Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]
EC number: =3.5.4.3 [H]
Molecular weight: Translated: 16452; Mature: 16321
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: PS00903 CYT_DCMP_DEAMINASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDTALLRRAVHLAHDNRARGGRPFGAVIARGGEVIATGVNDIVHSHDPSTHAEMQALR CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEEEECHHHHHHCCCCCHHHHHHHHH AATRQRANPSLAGCTVYASGHPCPMCLAALVMAGADRVFYAFDNRDAAPYGLSSEGAYQR HHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHE LRLPLDPPPLPLQRLATGIGVEQLYGDAPWPTDGP ECCCCCCCCCCHHHHHHHCCHHHHHCCCCCCCCCC >Mature Secondary Structure STDTALLRRAVHLAHDNRARGGRPFGAVIARGGEVIATGVNDIVHSHDPSTHAEMQALR CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEEEECHHHHHHCCCCCHHHHHHHHH AATRQRANPSLAGCTVYASGHPCPMCLAALVMAGADRVFYAFDNRDAAPYGLSSEGAYQR HHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHE LRLPLDPPPLPLQRLATGIGVEQLYGDAPWPTDGP ECCCCCCCCCCHHHHHHHCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 11101664 [H]