| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222111194
Identifier: 222111194
GI number: 222111194
Start: 2140629
End: 2141396
Strand: Direct
Name: 222111194
Synonym: Dtpsy_2002
Alternate gene names: NA
Gene position: 2140629-2141396 (Clockwise)
Preceding gene: 222111191
Following gene: 222111201
Centisome position: 56.38
GC content: 75.26
Gene sequence:
>768_bases ATGGCCGCAAAAGCCGCCCTTCCAGCCCGCTGTTCACGGGTTGCCTGGCCCAGCCGCCGCCCGACAATCGCGTGCGCGGC TCGGCCGCACTGTTCCTGCCGTCCTGTACTGCCTCGCCCGGAGACACCGCATGCCCCTGCCCCCGATCGCCCCGCCCTGC GCGGCTGGGCCGCCACCCTGGCCCTGTGCGCTGGCGCCCTGCTCCTGGCCGCGCCCGCCCTCGCCGCCACGGACCGTGAG GACGAGGCCGACGACGCCCCGCCCGTTCCGGTCGCGCCCGCCCAGCCGGTGCTGGTGCCGTCGCCCGACGGCGCGCTGGT GATCGATACGCAGGCGCGGCTGGCCTGGCCGCGCTGCGCGCAGGGCATGCAATGGACAGGCGCCACTTGCACCGGCGTGG CCCTGCGCTACACCTACGGCGAGGCCCAGGCGCTGGTGCGCCAGCGCTGGAAGGACGAGGGCGTGCGCTGGCGCCTGCCG CGCGTGCCCGAGCTGCGCCGACTGGTCAACCGCAACGCGCAGCCGCCCTCGGTCGACCCCCAACTCTTTCCCAATGCACC GCTGGAATGGCACTGGACCGGCACCGCCAGCGTCAACACCCTCAGCGTGAACCCCTACGCCTACGGCAACGTGGCGCGCG GCGGCGCGGGCGAGAGCAGCCTGTCGGTGCAGCAGGGCTGGGCCGTGGACATGACCAGCGGCGAGGCCCGCGGCGACGTG GGCCGCAGCACGCGCCTGCCCATACGGCTGGTGCGCCCGGCGCCCTGA
Upstream 100 bases:
>100_bases CGGGCGATTGTCGCCACACTGGCCGGATCGTGCTGGCGCGCTGCGCGAAGGCCCACATCGCCTCCCATGCAGCGCCGCGG CCGGCACCCGCGTGCGTTCG
Downstream 100 bases:
>100_bases GCGGATGCTCTGCGCACCCTGCACCTGGGTGGTCGCGCAAACGCTACATTTTCAATAGCTGCTAGCGCTTATCCAGCAAG CGCCAGAAGCCATTTCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MAAKAALPARCSRVAWPSRRPTIACAARPHCSCRPVLPRPETPHAPAPDRPALRGWAATLALCAGALLLAAPALAATDRE DEADDAPPVPVAPAQPVLVPSPDGALVIDTQARLAWPRCAQGMQWTGATCTGVALRYTYGEAQALVRQRWKDEGVRWRLP RVPELRRLVNRNAQPPSVDPQLFPNAPLEWHWTGTASVNTLSVNPYAYGNVARGGAGESSLSVQQGWAVDMTSGEARGDV GRSTRLPIRLVRPAP
Sequences:
>Translated_255_residues MAAKAALPARCSRVAWPSRRPTIACAARPHCSCRPVLPRPETPHAPAPDRPALRGWAATLALCAGALLLAAPALAATDRE DEADDAPPVPVAPAQPVLVPSPDGALVIDTQARLAWPRCAQGMQWTGATCTGVALRYTYGEAQALVRQRWKDEGVRWRLP RVPELRRLVNRNAQPPSVDPQLFPNAPLEWHWTGTASVNTLSVNPYAYGNVARGGAGESSLSVQQGWAVDMTSGEARGDV GRSTRLPIRLVRPAP >Mature_254_residues AAKAALPARCSRVAWPSRRPTIACAARPHCSCRPVLPRPETPHAPAPDRPALRGWAATLALCAGALLLAAPALAATDRED EADDAPPVPVAPAQPVLVPSPDGALVIDTQARLAWPRCAQGMQWTGATCTGVALRYTYGEAQALVRQRWKDEGVRWRLPR VPELRRLVNRNAQPPSVDPQLFPNAPLEWHWTGTASVNTLSVNPYAYGNVARGGAGESSLSVQQGWAVDMTSGEARGDVG RSTRLPIRLVRPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27310; Mature: 27179
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKAALPARCSRVAWPSRRPTIACAARPHCSCRPVLPRPETPHAPAPDRPALRGWAATL CCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH ALCAGALLLAAPALAATDREDEADDAPPVPVAPAQPVLVPSPDGALVIDTQARLAWPRCA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECHHHHCCHHHH QGMQWTGATCTGVALRYTYGEAQALVRQRWKDEGVRWRLPRVPELRRLVNRNAQPPSVDP CCCCCCCCEEEEEEEEEECHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCCCCCCCC QLFPNAPLEWHWTGTASVNTLSVNPYAYGNVARGGAGESSLSVQQGWAVDMTSGEARGDV CCCCCCCEEEEECCCCEEEEEEECCEECCCCCCCCCCCCCEEECCCEEEEECCCCCCCCC GRSTRLPIRLVRPAP CCCCCCCEEEECCCC >Mature Secondary Structure AAKAALPARCSRVAWPSRRPTIACAARPHCSCRPVLPRPETPHAPAPDRPALRGWAATL CCCCCCCHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH ALCAGALLLAAPALAATDREDEADDAPPVPVAPAQPVLVPSPDGALVIDTQARLAWPRCA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECHHHHCCHHHH QGMQWTGATCTGVALRYTYGEAQALVRQRWKDEGVRWRLPRVPELRRLVNRNAQPPSVDP CCCCCCCCEEEEEEEEEECHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCCCCCCCC QLFPNAPLEWHWTGTASVNTLSVNPYAYGNVARGGAGESSLSVQQGWAVDMTSGEARGDV CCCCCCCEEEEECCCCEEEEEEECCEECCCCCCCCCCCCCEEECCCEEEEECCCCCCCCC GRSTRLPIRLVRPAP CCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA