| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is dhaT [H]
Identifier: 222111185
GI number: 222111185
Start: 2128980
End: 2130116
Strand: Direct
Name: dhaT [H]
Synonym: Dtpsy_1993
Alternate gene names: 222111185
Gene position: 2128980-2130116 (Clockwise)
Preceding gene: 222111181
Following gene: 222111186
Centisome position: 56.08
GC content: 70.1
Gene sequence:
>1137_bases ATGGCTTTCATCTACTACGTCACCCAGATCCAGTTCGAATTCGGCGCCGTGCGCCTGCTCAAAGCAGAATGCGAGCGCAT CGGCATCACCCGCCCCCTGGTGGTCACCGACCCCGGCGTGAAGGCCGCCGGCGTGCTGCAGCAGGCACTGGACGCCCTGC CCGGCCTGAACGTCGCCGTGTTCGACCAGACGCCCTCCAACCCCACCGAGGCGGCCGTGCGCGCGGCCGTGGAACTCTAC AAGGCCCAGGGCTGCGACGGCCTGATCGCCGTGGGCGGTGGCAGCGCCATCGACTGCGCCAAGGGCATTGCCATCGCCGC CACGCACGACGGCCCGCTCACGCACTACGCCACCATCGAGGGGGGTTCGCCGCGCATCACCGAGCGCGCCGCGCCGCTGA TCGCCGTGCCCACCACCAGCGGCACGGGCAGCGAGGTGGCGCGCGGCGCCATCATCATCGTGGATGACCACCGCAAGCTG GGCTTTCACTCCTGGCACCTGGTGCCCAAGGCCGCCATCTGCGACCCCGGCCTCACGCTGGGCCTGCCGCCCCTGCTGAC GGCCGCCACAGGCATGGACGCCGTCGCGCACTGCATGGAAACTTTCATGTCCGCCGCCTTCAACCCGCCGGCGGACGGTA TTGCTCTCGATGGTCTGGAGCGCGGCTGGCACCATATCGAGGCCGCCACGCGCGACGGCCAGGACCGCGACGCGCGCCTG GCCATGATGAGCGCCAGCATGCAGGGCGCCATGGCCTTCCAGAAGGGCCTGGGCTGCGTGCACTCCCTGAGCCACAGCCT GGGCGGGCTGAACCCGCGCCTGCACCACGGCACGCTGAACGCCGTGTTCCTGCCCGCCGTGGTGCGTTTCAACGCGCAAG CCGAATCGGTGCGCAAGGAGCGCCGCCTGGAGCGCATGGCCCATGCCATGGGCCTGGCCTCCGCCAGCGACATCCCCGAT GCCATCCGCGACATGAGCGCACGCCTGGGCCTGCCCACGGGGCTGGCCGCCATGGGCGTGACCGAGGCGGTGTTCGACGA CGTGATCAAGGGCGCCCTGGCCGACCACTGCCACAAGACCAATCCCCGCCTGGCCACGCCAGATGACTACCGGGAGATGC TGATCGAGTCGCTCTGA
Upstream 100 bases:
>100_bases CCCGCGCACAGGGCGATGAGGGTTTGCTTCATGGTCATGCGTGTCTCCTGGTTGTAGTGTGTCGGGCGATCCTACTGGCA CTCCCTCTCTTTCGCACACC
Downstream 100 bases:
>100_bases CCCGCGGCAGCGTCCGCCGAGCAGGCGCCCGGCGGCCTCGCTACACTGGTGCGCTTAACATTTATTAACACGCATTCCGC CGGTTCGGCGGGGCCGCGTA
Product: iron-containing alcohol dehydrogenase
Products: NA
Alternate protein names: 1,3-propanediol oxidoreductase; 3-hydroxypropionaldehyde reductase [H]
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MAFIYYVTQIQFEFGAVRLLKAECERIGITRPLVVTDPGVKAAGVLQQALDALPGLNVAVFDQTPSNPTEAAVRAAVELY KAQGCDGLIAVGGGSAIDCAKGIAIAATHDGPLTHYATIEGGSPRITERAAPLIAVPTTSGTGSEVARGAIIIVDDHRKL GFHSWHLVPKAAICDPGLTLGLPPLLTAATGMDAVAHCMETFMSAAFNPPADGIALDGLERGWHHIEAATRDGQDRDARL AMMSASMQGAMAFQKGLGCVHSLSHSLGGLNPRLHHGTLNAVFLPAVVRFNAQAESVRKERRLERMAHAMGLASASDIPD AIRDMSARLGLPTGLAAMGVTEAVFDDVIKGALADHCHKTNPRLATPDDYREMLIESL
Sequences:
>Translated_378_residues MAFIYYVTQIQFEFGAVRLLKAECERIGITRPLVVTDPGVKAAGVLQQALDALPGLNVAVFDQTPSNPTEAAVRAAVELY KAQGCDGLIAVGGGSAIDCAKGIAIAATHDGPLTHYATIEGGSPRITERAAPLIAVPTTSGTGSEVARGAIIIVDDHRKL GFHSWHLVPKAAICDPGLTLGLPPLLTAATGMDAVAHCMETFMSAAFNPPADGIALDGLERGWHHIEAATRDGQDRDARL AMMSASMQGAMAFQKGLGCVHSLSHSLGGLNPRLHHGTLNAVFLPAVVRFNAQAESVRKERRLERMAHAMGLASASDIPD AIRDMSARLGLPTGLAAMGVTEAVFDDVIKGALADHCHKTNPRLATPDDYREMLIESL >Mature_377_residues AFIYYVTQIQFEFGAVRLLKAECERIGITRPLVVTDPGVKAAGVLQQALDALPGLNVAVFDQTPSNPTEAAVRAAVELYK AQGCDGLIAVGGGSAIDCAKGIAIAATHDGPLTHYATIEGGSPRITERAAPLIAVPTTSGTGSEVARGAIIIVDDHRKLG FHSWHLVPKAAICDPGLTLGLPPLLTAATGMDAVAHCMETFMSAAFNPPADGIALDGLERGWHHIEAATRDGQDRDARLA MMSASMQGAMAFQKGLGCVHSLSHSLGGLNPRLHHGTLNAVFLPAVVRFNAQAESVRKERRLERMAHAMGLASASDIPDA IRDMSARLGLPTGLAAMGVTEAVFDDVIKGALADHCHKTNPRLATPDDYREMLIESL
Specific function: Most active with substrates containing two primary alcohol groups separated by one or two carbon atoms. In the physiological direction, 3-hydroxypropionaldehyde is the preferred substrate [H]
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=397, Percent_Identity=27.7078085642317, Blast_Score=103, Evalue=3e-22, Organism=Escherichia coli, GI48994951, Length=354, Percent_Identity=37.0056497175141, Blast_Score=194, Evalue=6e-51, Organism=Escherichia coli, GI1789163, Length=373, Percent_Identity=32.171581769437, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI1787493, Length=407, Percent_Identity=30.7125307125307, Blast_Score=146, Evalue=2e-36, Organism=Escherichia coli, GI87082107, Length=363, Percent_Identity=32.2314049586777, Blast_Score=144, Evalue=9e-36, Organism=Escherichia coli, GI1789386, Length=352, Percent_Identity=32.1022727272727, Blast_Score=114, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17537053, Length=291, Percent_Identity=27.8350515463918, Blast_Score=103, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6321181, Length=340, Percent_Identity=38.8235294117647, Blast_Score=209, Evalue=7e-55, Organism=Drosophila melanogaster, GI24657991, Length=419, Percent_Identity=27.4463007159904, Blast_Score=105, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.1.1.202 [H]
Molecular weight: Translated: 39813; Mature: 39682
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS00913 ADH_IRON_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFIYYVTQIQFEFGAVRLLKAECERIGITRPLVVTDPGVKAAGVLQQALDALPGLNVAV CEEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEE FDQTPSNPTEAAVRAAVELYKAQGCDGLIAVGGGSAIDCAKGIAIAATHDGPLTHYATIE ECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCCCCEEEEEEC GGSPRITERAAPLIAVPTTSGTGSEVARGAIIIVDDHRKLGFHSWHLVPKAAICDPGLTL CCCCCCHHHCCCEEEEECCCCCCHHHHCCEEEEEECCCCCCCCEEECCCCHHHCCCCCCC GLPPLLTAATGMDAVAHCMETFMSAAFNPPADGIALDGLERGWHHIEAATRDGQDRDARL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHCCCCCHHHHH AMMSASMQGAMAFQKGLGCVHSLSHSLGGLNPRLHHGTLNAVFLPAVVRFNAQAESVRKE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHCCCHHHHHHHH RRLERMAHAMGLASASDIPDAIRDMSARLGLPTGLAAMGVTEAVFDDVIKGALADHCHKT HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC NPRLATPDDYREMLIESL CCCCCCCHHHHHHHHHCC >Mature Secondary Structure AFIYYVTQIQFEFGAVRLLKAECERIGITRPLVVTDPGVKAAGVLQQALDALPGLNVAV EEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEE FDQTPSNPTEAAVRAAVELYKAQGCDGLIAVGGGSAIDCAKGIAIAATHDGPLTHYATIE ECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCCCCEEEEEEC GGSPRITERAAPLIAVPTTSGTGSEVARGAIIIVDDHRKLGFHSWHLVPKAAICDPGLTL CCCCCCHHHCCCEEEEECCCCCCHHHHCCEEEEEECCCCCCCCEEECCCCHHHCCCCCCC GLPPLLTAATGMDAVAHCMETFMSAAFNPPADGIALDGLERGWHHIEAATRDGQDRDARL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHCCCCCHHHHH AMMSASMQGAMAFQKGLGCVHSLSHSLGGLNPRLHHGTLNAVFLPAVVRFNAQAESVRKE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHCCCHHHHHHHH RRLERMAHAMGLASASDIPDAIRDMSARLGLPTGLAAMGVTEAVFDDVIKGALADHCHKT HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC NPRLATPDDYREMLIESL CCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7721705 [H]