| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
Click here to switch to the map view.
The map label for this gene is 222111159
Identifier: 222111159
GI number: 222111159
Start: 2104940
End: 2105500
Strand: Direct
Name: 222111159
Synonym: Dtpsy_1967
Alternate gene names: NA
Gene position: 2104940-2105500 (Clockwise)
Preceding gene: 222111158
Following gene: 222111161
Centisome position: 55.44
GC content: 69.88
Gene sequence:
>561_bases ATGCCTCTGTCATCCCCTGCCCCCCGCACTGCCCGCCATGTCCGACGCGTCACCTACCAGGGTTACGAGCGCGAGGACGG GCTCTGGGACATCGAGGGCGAGCTGCACGACAGCAAGCCGCAGGACCTGCCGTCGCTGCGCTACCCGGACGGCGTGCGCC GCGCGGGCGAACCCATCCACCACCTGTGGCTGCGCGTCACCGTGGACCGCGACCTGGTGGTGCGTGCCATCGAATCCGCC ATGGATGCCCACCCCCTGGCGGGCTGCACACAAGCGCAGCGCGCCCTGCAGGCGATGGTGGGCTGCAGCATGGCGCGCGG CTGGCGCCAGTCCATCCAGACCCACCTGGGCGGCGTGGCCGGTTGCACCCATCTGCGGGAACTGCTGTTCAACCTGGCCA CGGCCACGTTCCAGACGATTCACGCCGCATTCCAGAACGAAGGCGACGAGCCGCCGCGCCACTTGGGCCAGTGCACGGGT TGGGACTTCAGCGGTCAGGGAGTGAAGGAGCACTACCCGCAGTTCTACGGCCGCGCGCCGCGCACGCCGAAGGCAGCCTG A
Upstream 100 bases:
>100_bases GACCGTGGCCATCCGCCACGGCTGATCCCTGCGAGCCGCGTGCCCTGCGGTGCCCCGCCAGTGCTCGCTTGGCCGCTGAT ACGTTTCCCATCTCGACCCC
Downstream 100 bases:
>100_bases TCGGCAACCGCTCCCGATTCAATAGCTGCCCGCGCTTTCTGCACGGGCGCTAGAGGCACTTTTTGCCCATAGGCCTGATT TAGATCGACAGCATGTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MPLSSPAPRTARHVRRVTYQGYEREDGLWDIEGELHDSKPQDLPSLRYPDGVRRAGEPIHHLWLRVTVDRDLVVRAIESA MDAHPLAGCTQAQRALQAMVGCSMARGWRQSIQTHLGGVAGCTHLRELLFNLATATFQTIHAAFQNEGDEPPRHLGQCTG WDFSGQGVKEHYPQFYGRAPRTPKAA
Sequences:
>Translated_186_residues MPLSSPAPRTARHVRRVTYQGYEREDGLWDIEGELHDSKPQDLPSLRYPDGVRRAGEPIHHLWLRVTVDRDLVVRAIESA MDAHPLAGCTQAQRALQAMVGCSMARGWRQSIQTHLGGVAGCTHLRELLFNLATATFQTIHAAFQNEGDEPPRHLGQCTG WDFSGQGVKEHYPQFYGRAPRTPKAA >Mature_185_residues PLSSPAPRTARHVRRVTYQGYEREDGLWDIEGELHDSKPQDLPSLRYPDGVRRAGEPIHHLWLRVTVDRDLVVRAIESAM DAHPLAGCTQAQRALQAMVGCSMARGWRQSIQTHLGGVAGCTHLRELLFNLATATFQTIHAAFQNEGDEPPRHLGQCTGW DFSGQGVKEHYPQFYGRAPRTPKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20787; Mature: 20655
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSSPAPRTARHVRRVTYQGYEREDGLWDIEGELHDSKPQDLPSLRYPDGVRRAGEPIH CCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHCCHHH HLWLRVTVDRDLVVRAIESAMDAHPLAGCTQAQRALQAMVGCSMARGWRQSIQTHLGGVA HHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH GCTHLRELLFNLATATFQTIHAAFQNEGDEPPRHLGQCTGWDFSGQGVKEHYPQFYGRAP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCC RTPKAA CCCCCC >Mature Secondary Structure PLSSPAPRTARHVRRVTYQGYEREDGLWDIEGELHDSKPQDLPSLRYPDGVRRAGEPIH CCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHCCHHH HLWLRVTVDRDLVVRAIESAMDAHPLAGCTQAQRALQAMVGCSMARGWRQSIQTHLGGVA HHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH GCTHLRELLFNLATATFQTIHAAFQNEGDEPPRHLGQCTGWDFSGQGVKEHYPQFYGRAP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCC RTPKAA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA