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The map label for this gene is comL [H]

Identifier: 222111092

GI number: 222111092

Start: 2027857

End: 2028654

Strand: Direct

Name: comL [H]

Synonym: Dtpsy_1899

Alternate gene names: 222111092

Gene position: 2027857-2028654 (Clockwise)

Preceding gene: 222111087

Following gene: 222111094

Centisome position: 53.41

GC content: 62.78

Gene sequence:

>798_bases
ATGCCGCGTTTTCCCCTGCCTTTGATTTCTGCCCTGCTCGCCGCCGGCCTGCTGGCTGCCTGCTCCAGCACGCCTGAAGA
CAAGACCGCTGGCTGGAGCACCGACAAGATTTATTCGGAAGCACGCGACGAGCTCAATGGCGGCTCTTACGACAAAGCCG
TGCCGCTGCTGGAAAAGCTGGAAGGACGCGCCGCCGGCACGCCGTTGGCACAACAGGCCCAGTTGGAAAAGGCCTACGCG
CAATACAAGGGCGGCGAGAAGGCGCAGGCTATTGCCACGCTGGACCGCTTCATGAAACTGCACCCCGCCAGCCCAGCGTA
CGACTATGCGCTGTACCTCAAAGGCTTGGTGAACTTCAACGACAACCTGGGCCTGTTCTCGTGGCTCTCGCGCCAGGACC
TGTCGGAGCGCGACCAGAAGGCTGCCAAGGACTCGTTCGAGTCCTTCCGCGAACTGGTGACCCGCTTCCCCGAGTCGCGC
TACACGCCCGACGCCCGCCAGCGCATGACCTACATCGTCAACTCGCTGGCGCAGTACGAGGTACACGTGGCGCGCTACTA
CTATGAACGCGGCGCGTACGTGGCCGCCGTGAGCCGCGCGCAGAGTGCCGTTGCCGACTACAAGGATGTTCCAGCGACGG
AAGAGGCTCTGTACATCCTGGTTCGGTCGTACGACGCGCTGGGACTCACGCAACTGCGTGACGACACCCGCCGCGTGATG
GATGCTTCCTATCCTCAGAGCAGCCTGCCGCAGACGGGATTCAAGGCGAAGGCGAACCCCTGGTGGAAGTTCTGGTAA

Upstream 100 bases:

>100_bases
TGCTCAGGGCCCCGCGCGCAGCATCCTTACAATGGCGCAATGCGGCCGCTCCATGGAGGTGCCGCCGCCGTCGCATACCC
TTAATCCAAGAGCTGCCGCC

Downstream 100 bases:

>100_bases
GGGCATCCAGCGCCGCGCCGAACTCTTCCTGCGTATGCAGCCTCCGCATGGGGGGCAATGCCCGCAGCAGAGGCTTGCCA
TAGCCCTTGTGCAACAGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MPRFPLPLISALLAAGLLAACSSTPEDKTAGWSTDKIYSEARDELNGGSYDKAVPLLEKLEGRAAGTPLAQQAQLEKAYA
QYKGGEKAQAIATLDRFMKLHPASPAYDYALYLKGLVNFNDNLGLFSWLSRQDLSERDQKAAKDSFESFRELVTRFPESR
YTPDARQRMTYIVNSLAQYEVHVARYYYERGAYVAAVSRAQSAVADYKDVPATEEALYILVRSYDALGLTQLRDDTRRVM
DASYPQSSLPQTGFKAKANPWWKFW

Sequences:

>Translated_265_residues
MPRFPLPLISALLAAGLLAACSSTPEDKTAGWSTDKIYSEARDELNGGSYDKAVPLLEKLEGRAAGTPLAQQAQLEKAYA
QYKGGEKAQAIATLDRFMKLHPASPAYDYALYLKGLVNFNDNLGLFSWLSRQDLSERDQKAAKDSFESFRELVTRFPESR
YTPDARQRMTYIVNSLAQYEVHVARYYYERGAYVAAVSRAQSAVADYKDVPATEEALYILVRSYDALGLTQLRDDTRRVM
DASYPQSSLPQTGFKAKANPWWKFW
>Mature_264_residues
PRFPLPLISALLAAGLLAACSSTPEDKTAGWSTDKIYSEARDELNGGSYDKAVPLLEKLEGRAAGTPLAQQAQLEKAYAQ
YKGGEKAQAIATLDRFMKLHPASPAYDYALYLKGLVNFNDNLGLFSWLSRQDLSERDQKAAKDSFESFRELVTRFPESRY
TPDARQRMTYIVNSLAQYEVHVARYYYERGAYVAAVSRAQSAVADYKDVPATEEALYILVRSYDALGLTQLRDDTRRVMD
ASYPQSSLPQTGFKAKANPWWKFW

Specific function: Required for efficient transformation of Neisseria gonorrhoeae by species-related DNA [H]

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0169 (ComL) family [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=236, Percent_Identity=34.3220338983051, Blast_Score=146, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29814; Mature: 29683

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRFPLPLISALLAAGLLAACSSTPEDKTAGWSTDKIYSEARDELNGGSYDKAVPLLEKL
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
EGRAAGTPLAQQAQLEKAYAQYKGGEKAQAIATLDRFMKLHPASPAYDYALYLKGLVNFN
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
DNLGLFSWLSRQDLSERDQKAAKDSFESFRELVTRFPESRYTPDARQRMTYIVNSLAQYE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
VHVARYYYERGAYVAAVSRAQSAVADYKDVPATEEALYILVRSYDALGLTQLRDDTRRVM
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
DASYPQSSLPQTGFKAKANPWWKFW
HCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PRFPLPLISALLAAGLLAACSSTPEDKTAGWSTDKIYSEARDELNGGSYDKAVPLLEKL
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
EGRAAGTPLAQQAQLEKAYAQYKGGEKAQAIATLDRFMKLHPASPAYDYALYLKGLVNFN
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
DNLGLFSWLSRQDLSERDQKAAKDSFESFRELVTRFPESRYTPDARQRMTYIVNSLAQYE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
VHVARYYYERGAYVAAVSRAQSAVADYKDVPATEEALYILVRSYDALGLTQLRDDTRRVM
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
DASYPQSSLPQTGFKAKANPWWKFW
HCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8830266 [H]