| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222111034
Identifier: 222111034
GI number: 222111034
Start: 1958368
End: 1958772
Strand: Direct
Name: 222111034
Synonym: Dtpsy_1841
Alternate gene names: NA
Gene position: 1958368-1958772 (Clockwise)
Preceding gene: 222111033
Following gene: 222111035
Centisome position: 51.58
GC content: 74.57
Gene sequence:
>405_bases ATGTCCCTGACACCCGCGCTCTTGCCGCAACTGCGCCGCCGCCTGGCCCTGACCTGGCTGCTGCTGGCGCTGGTGCTCGC GCCCGCACTCGGGCGCATGCACCAGGTGTTGCACCTGCCCGCGGGGCAAGGGCTGGCGCATGCCTTGCACGACGACGGGC ATGCACGGGATGCGGCAAGCGCCGGGCAACAGGCCCTGGACACCCTGCATGCGCTGTTTGCCGGGCACGGCGCCGCGGAC TGCCAGGTGCTGGACGAGCAGACGCTGGTGGGCGCCGCGCTGGGCCAGGCCCCCGCGCAGGTCCAGGCACAGCCGCAGCT GCCCCCTGCCAGAACCCCAGCACCCGTGCCGCGTGCAGGCCGGGCGGCGCCTTTCCATGCCCGCGCTCCGCCCCTGAGCG CCTGA
Upstream 100 bases:
>100_bases TGCCGCAAGGAATTGCAGGCCGCCTGCAAGAACCTGGCGATCGGCAAGTACTGCGGCATGAAGCACGCCCACTGACGACT GCACCTTTCACCCAGCCCGC
Downstream 100 bases:
>100_bases GGCTCCCCGCCTCGCGCCGCCCCTTTGCGTGCCGGCGCCAAAAAACTCCTCTTTTTATAGCTGCTCGCGCTTGATACATA AGCGTTAGAGGCAGTTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MSLTPALLPQLRRRLALTWLLLALVLAPALGRMHQVLHLPAGQGLAHALHDDGHARDAASAGQQALDTLHALFAGHGAAD CQVLDEQTLVGAALGQAPAQVQAQPQLPPARTPAPVPRAGRAAPFHARAPPLSA
Sequences:
>Translated_134_residues MSLTPALLPQLRRRLALTWLLLALVLAPALGRMHQVLHLPAGQGLAHALHDDGHARDAASAGQQALDTLHALFAGHGAAD CQVLDEQTLVGAALGQAPAQVQAQPQLPPARTPAPVPRAGRAAPFHARAPPLSA >Mature_133_residues SLTPALLPQLRRRLALTWLLLALVLAPALGRMHQVLHLPAGQGLAHALHDDGHARDAASAGQQALDTLHALFAGHGAADC QVLDEQTLVGAALGQAPAQVQAQPQLPPARTPAPVPRAGRAAPFHARAPPLSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13864; Mature: 13733
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTPALLPQLRRRLALTWLLLALVLAPALGRMHQVLHLPAGQGLAHALHDDGHARDAAS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHH AGQQALDTLHALFAGHGAADCQVLDEQTLVGAALGQAPAQVQAQPQLPPARTPAPVPRAG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC RAAPFHARAPPLSA CCCCCCCCCCCCCC >Mature Secondary Structure SLTPALLPQLRRRLALTWLLLALVLAPALGRMHQVLHLPAGQGLAHALHDDGHARDAAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHH AGQQALDTLHALFAGHGAADCQVLDEQTLVGAALGQAPAQVQAQPQLPPARTPAPVPRAG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC RAAPFHARAPPLSA CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA