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The map label for this gene is cirA [C]

Identifier: 222111035

GI number: 222111035

Start: 1958947

End: 1961028

Strand: Direct

Name: cirA [C]

Synonym: Dtpsy_1842

Alternate gene names: 222111035

Gene position: 1958947-1961028 (Clockwise)

Preceding gene: 222111034

Following gene: 222111036

Centisome position: 51.6

GC content: 71.37

Gene sequence:

>2082_bases
ATGAACTCCTTCACCCCTTTCGCCCGCATGCCGGGCGCAATGCACCCGCTGGCCTGGGCCGCGCTGCTGTGCCTGACCAG
CGCAGCACCCGCGTGGGCGCAGGCGGATGCCCGCCTGCCCGAGGTCACCGTGTCCTCCAGCGGTTTGCAGCTGGGCGTGT
CCGAAATGACGCAGCCCGTGTCTGTGCTGGAGGGCGACGCCCTCGTGCGCCAGCGCGAGGCCACGCTGGGCGAGACCCTG
GACGGCGAGCCCGGCATCACCGGCAGCCATTTCGGCGCGGGCGCCAGCCGCCCTGTGATCCGCGGCATGGACGGCCCGCG
CGTGCGCGTGCTCTCTGACGGGTCCGAACTGCACGACGCCTCCACCGTCAGCCCGGACCACGCCGTGGCGGCCGAGCCGC
TGCTGGCCACGCAGGTCGAAGTGCTGCGCGGGCCGTCGGCGCTGGTCTACGGCGGCGGTGCCGTGGGCGGCGTGGTCAAC
GTGCTGGACGGCAAGGTGCCCACGGCCGTGCCCGACAAAGGCTACGAAGGCAGCGCCGAGCTGCGCGCCGGCAGTGCGGC
ACGCGAAAAGGCCGGCGCTGTCGCGCTGACCGGTGGCGCGGGCAACCTGGCCGTGCACGTGGAGGCCGCCGGTCGGGACG
CCGACGACTACCGCGTGGGCAGCGGCTGGGCCGAGGGGCGCCGCGTGCCCGGCAGCTTCAACCGCACGGGTACCGGCAGC
GTGGGGCTGTCCTGGGTTGGCAGCCGCGGCTACCTGGGCCTGGCCTTCACACGCCAGAACGCCAAATACGGCCTGCCGGG
CCACAGCCACAGTTTCGAAGGCTGCCACACCCATGGCAACCACCTGCACTGCGGCAGCCATGACGAGCACGACCACGAGG
ACGACGGGCATGACCACGACCACGGTCACGAAGCCGTTCCTGTGGTGGACCTGCGCAGCGAGCGCGTGGACATCCGCGGT
GAGCTGCGCGACCCGTTCACCGGCTTCTCCGCGCTGCGCCTGCGCGCGGGCGTGACCGACTACGTACACGACGAGGTGGA
GGAGGGCACCGTCGCCACCACCTTCAAGAACAAGGCCCACGACCTGCGCGTGGAGTTGCAGCACGAGCCCGTCGCCGGCT
GGCGCGGCGTGCTGGGCCTGCAGACCGGGCAGCGCAAGTTCAGCGCCGCGGGAGAAGAGGCCTACGTGCAACCCACCCTC
ACGCGCCAATGGGGCGTGTTTCTGCTGGAGGAATACCGCCTGGGCGACTGGCATGGCGACTGGCGCATCGAGACCGCGCT
GCGTCACGACCGCCAAAGCGCCGAAGCGCAGGACAGCGGTGTAGAGCGGCGCCACCACGGCACCTCCGCATCGCTGGGCG
CGGTGTGGCGCTTTGCGCCTGGCTACGCCGCGGGCGCGAGCATCACCCGCGCCCACCGTGCGCCCACCGCCGAGGAACTG
TACGCGCGCGGCCTGCACATGGCCACGTCCACCTACGAGCGTGGCGACGCCAGTCTGCGTGCGGAAACCTCGCGCAACAT
CGACCTGAGCCTGCGCAAGACCAGCGGGGACACCACGTTTGACGTGAGCGTGTTCCATAACCGCATCCGCAACTACATCT
ACGGCCGCACGCTCGACGAACTGGACGGCCTGCAGCTGCTGCAGTACAGCCAGGCGGGCGCCACCTTTACCGGCATGGAG
GGCCGGGTGCGCCAGCGCATCACGCAGCGCCTGGGGGTCACCCTGTTCGGGGACAGCGTGCGTGCCCGCCTGGACGGTGG
CGCGCGGTTGCCGCGCATCGCCCCCGCACGCGTGGGCCTGCGCCTGGATGCCAACTGGCGCGACTGGGACGGCGCGGTGG
AATGGGTGCAGGTGGCGCGGCAAAACCGCGTGGCCGCGTTCGAGACCGCCACGCCTGGCTACGGCATGCTGAACCTGGGC
CTGGCCTACAACAGCCGCACGGGCAGTGGCACGCCGTGGCAGGTGTACCTGAAGGCGCGCAACCTCACGGACCGCCTGGC
CTACGCCCACACCTCGTTCATCAAGGACGCGGCCCCGCTGGCAGGGCGCAACGTGACGGTGGGCGTGCGCGTGTCGTTCT
GA

Upstream 100 bases:

>100_bases
TACATAAGCGTTAGAGGCAGTTTTGAATCAATTTTCAAGCGCGGCCGCGTGCGGCCCAAGCGCTCGCGCGCGCCTGCCGC
CTTTTGACGGAAATCGTTGT

Downstream 100 bases:

>100_bases
CACCGTCATCCCCGGCCCGCGGCGGGTGCGCATGCACATCCGCCGCGCAGCACGCACGGCGGTGCGCAAAAGACCGCGCG
CCGCCGTGCGACAAGGTTGT

Product: tonb-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 693; Mature: 693

Protein sequence:

>693_residues
MNSFTPFARMPGAMHPLAWAALLCLTSAAPAWAQADARLPEVTVSSSGLQLGVSEMTQPVSVLEGDALVRQREATLGETL
DGEPGITGSHFGAGASRPVIRGMDGPRVRVLSDGSELHDASTVSPDHAVAAEPLLATQVEVLRGPSALVYGGGAVGGVVN
VLDGKVPTAVPDKGYEGSAELRAGSAAREKAGAVALTGGAGNLAVHVEAAGRDADDYRVGSGWAEGRRVPGSFNRTGTGS
VGLSWVGSRGYLGLAFTRQNAKYGLPGHSHSFEGCHTHGNHLHCGSHDEHDHEDDGHDHDHGHEAVPVVDLRSERVDIRG
ELRDPFTGFSALRLRAGVTDYVHDEVEEGTVATTFKNKAHDLRVELQHEPVAGWRGVLGLQTGQRKFSAAGEEAYVQPTL
TRQWGVFLLEEYRLGDWHGDWRIETALRHDRQSAEAQDSGVERRHHGTSASLGAVWRFAPGYAAGASITRAHRAPTAEEL
YARGLHMATSTYERGDASLRAETSRNIDLSLRKTSGDTTFDVSVFHNRIRNYIYGRTLDELDGLQLLQYSQAGATFTGME
GRVRQRITQRLGVTLFGDSVRARLDGGARLPRIAPARVGLRLDANWRDWDGAVEWVQVARQNRVAAFETATPGYGMLNLG
LAYNSRTGSGTPWQVYLKARNLTDRLAYAHTSFIKDAAPLAGRNVTVGVRVSF

Sequences:

>Translated_693_residues
MNSFTPFARMPGAMHPLAWAALLCLTSAAPAWAQADARLPEVTVSSSGLQLGVSEMTQPVSVLEGDALVRQREATLGETL
DGEPGITGSHFGAGASRPVIRGMDGPRVRVLSDGSELHDASTVSPDHAVAAEPLLATQVEVLRGPSALVYGGGAVGGVVN
VLDGKVPTAVPDKGYEGSAELRAGSAAREKAGAVALTGGAGNLAVHVEAAGRDADDYRVGSGWAEGRRVPGSFNRTGTGS
VGLSWVGSRGYLGLAFTRQNAKYGLPGHSHSFEGCHTHGNHLHCGSHDEHDHEDDGHDHDHGHEAVPVVDLRSERVDIRG
ELRDPFTGFSALRLRAGVTDYVHDEVEEGTVATTFKNKAHDLRVELQHEPVAGWRGVLGLQTGQRKFSAAGEEAYVQPTL
TRQWGVFLLEEYRLGDWHGDWRIETALRHDRQSAEAQDSGVERRHHGTSASLGAVWRFAPGYAAGASITRAHRAPTAEEL
YARGLHMATSTYERGDASLRAETSRNIDLSLRKTSGDTTFDVSVFHNRIRNYIYGRTLDELDGLQLLQYSQAGATFTGME
GRVRQRITQRLGVTLFGDSVRARLDGGARLPRIAPARVGLRLDANWRDWDGAVEWVQVARQNRVAAFETATPGYGMLNLG
LAYNSRTGSGTPWQVYLKARNLTDRLAYAHTSFIKDAAPLAGRNVTVGVRVSF
>Mature_693_residues
MNSFTPFARMPGAMHPLAWAALLCLTSAAPAWAQADARLPEVTVSSSGLQLGVSEMTQPVSVLEGDALVRQREATLGETL
DGEPGITGSHFGAGASRPVIRGMDGPRVRVLSDGSELHDASTVSPDHAVAAEPLLATQVEVLRGPSALVYGGGAVGGVVN
VLDGKVPTAVPDKGYEGSAELRAGSAAREKAGAVALTGGAGNLAVHVEAAGRDADDYRVGSGWAEGRRVPGSFNRTGTGS
VGLSWVGSRGYLGLAFTRQNAKYGLPGHSHSFEGCHTHGNHLHCGSHDEHDHEDDGHDHDHGHEAVPVVDLRSERVDIRG
ELRDPFTGFSALRLRAGVTDYVHDEVEEGTVATTFKNKAHDLRVELQHEPVAGWRGVLGLQTGQRKFSAAGEEAYVQPTL
TRQWGVFLLEEYRLGDWHGDWRIETALRHDRQSAEAQDSGVERRHHGTSASLGAVWRFAPGYAAGASITRAHRAPTAEEL
YARGLHMATSTYERGDASLRAETSRNIDLSLRKTSGDTTFDVSVFHNRIRNYIYGRTLDELDGLQLLQYSQAGATFTGME
GRVRQRITQRLGVTLFGDSVRARLDGGARLPRIAPARVGLRLDANWRDWDGAVEWVQVARQNRVAAFETATPGYGMLNLG
LAYNSRTGSGTPWQVYLKARNLTDRLAYAHTSFIKDAAPLAGRNVTVGVRVSF

Specific function: Probable receptor, tonB-dependent [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 74622; Mature: 74622

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSFTPFARMPGAMHPLAWAALLCLTSAAPAWAQADARLPEVTVSSSGLQLGVSEMTQPV
CCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCEEEECCCCCEECHHHHCCCH
SVLEGDALVRQREATLGETLDGEPGITGSHFGAGASRPVIRGMDGPRVRVLSDGSELHDA
HHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCHHCCC
STVSPDHAVAAEPLLATQVEVLRGPSALVYGGGAVGGVVNVLDGKVPTAVPDKGYEGSAE
CCCCCCCHHHCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
LRAGSAAREKAGAVALTGGAGNLAVHVEAAGRDADDYRVGSGWAEGRRVPGSFNRTGTGS
CCCCCHHHHCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC
VGLSWVGSRGYLGLAFTRQNAKYGLPGHSHSFEGCHTHGNHLHCGSHDEHDHEDDGHDHD
CCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
HGHEAVPVVDLRSERVDIRGELRDPFTGFSALRLRAGVTDYVHDEVEEGTVATTFKNKAH
CCCCCEEEEECCCCCEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHCCEEEEEECCCCC
DLRVELQHEPVAGWRGVLGLQTGQRKFSAAGEEAYVQPTLTRQWGVFLLEEYRLGDWHGD
EEEEEEECCCCCCCCCEEECCCCCHHHHCCCCCEEECCCHHHHHCEEEEEEEECCCCCCC
WRIETALRHDRQSAEAQDSGVERRHHGTSASLGAVWRFAPGYAAGASITRAHRAPTAEEL
EEEEHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHEEECCCCCCCCCHHHHHCCCCHHHH
YARGLHMATSTYERGDASLRAETSRNIDLSLRKTSGDTTFDVSVFHNRIRNYIYGRTLDE
HHCCHHHHHCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHCCCCHHH
LDGLQLLQYSQAGATFTGMEGRVRQRITQRLGVTLFGDSVRARLDGGARLPRIAPARVGL
HCCHHHHHHHCCCCEEECCCHHHHHHHHHHHCEEEECCCCEEEECCCCCCCCCCCCCEEE
RLDANWRDWDGAVEWVQVARQNRVAAFETATPGYGMLNLGLAYNSRTGSGTPWQVYLKAR
EECCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEECCCCCCCCCEEEEEEEC
NLTDRLAYAHTSFIKDAAPLAGRNVTVGVRVSF
CCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MNSFTPFARMPGAMHPLAWAALLCLTSAAPAWAQADARLPEVTVSSSGLQLGVSEMTQPV
CCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCEEEECCCCCEECHHHHCCCH
SVLEGDALVRQREATLGETLDGEPGITGSHFGAGASRPVIRGMDGPRVRVLSDGSELHDA
HHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCHHCCC
STVSPDHAVAAEPLLATQVEVLRGPSALVYGGGAVGGVVNVLDGKVPTAVPDKGYEGSAE
CCCCCCCHHHCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
LRAGSAAREKAGAVALTGGAGNLAVHVEAAGRDADDYRVGSGWAEGRRVPGSFNRTGTGS
CCCCCHHHHCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC
VGLSWVGSRGYLGLAFTRQNAKYGLPGHSHSFEGCHTHGNHLHCGSHDEHDHEDDGHDHD
CCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
HGHEAVPVVDLRSERVDIRGELRDPFTGFSALRLRAGVTDYVHDEVEEGTVATTFKNKAH
CCCCCEEEEECCCCCEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHCCEEEEEECCCCC
DLRVELQHEPVAGWRGVLGLQTGQRKFSAAGEEAYVQPTLTRQWGVFLLEEYRLGDWHGD
EEEEEEECCCCCCCCCEEECCCCCHHHHCCCCCEEECCCHHHHHCEEEEEEEECCCCCCC
WRIETALRHDRQSAEAQDSGVERRHHGTSASLGAVWRFAPGYAAGASITRAHRAPTAEEL
EEEEHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHEEECCCCCCCCCHHHHHCCCCHHHH
YARGLHMATSTYERGDASLRAETSRNIDLSLRKTSGDTTFDVSVFHNRIRNYIYGRTLDE
HHCCHHHHHCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHCCCCHHH
LDGLQLLQYSQAGATFTGMEGRVRQRITQRLGVTLFGDSVRARLDGGARLPRIAPARVGL
HCCHHHHHHHCCCCEEECCCHHHHHHHHHHHCEEEECCCCEEEECCCCCCCCCCCCCEEE
RLDANWRDWDGAVEWVQVARQNRVAAFETATPGYGMLNLGLAYNSRTGSGTPWQVYLKAR
EECCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEECCCCCCCCCEEEEEEEC
NLTDRLAYAHTSFIKDAAPLAGRNVTVGVRVSF
CCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]