| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is pepA
Identifier: 222110918
GI number: 222110918
Start: 1831645
End: 1833135
Strand: Direct
Name: pepA
Synonym: Dtpsy_1725
Alternate gene names: 222110918
Gene position: 1831645-1833135 (Clockwise)
Preceding gene: 222110912
Following gene: 222110919
Centisome position: 48.24
GC content: 65.79
Gene sequence:
>1491_bases ATGAACTTCGAACTGAAGACGCTTTCGCTGGCTGCCGCTGCTGCGTACAAATGCGACCTGCTGGTGGTGTTGGTGCCTGA AGGCTTCCTGCCGGGCAGCGACGTGTTGTCTACCCTGACGGCGCATGCGCTCAAGCAAGGCGATCTGGAGGTTAAACCGG GCAAGCTCCTGCAGTGCTATGCCCCCGCCGGTGTTGCGGCGCGTCGGGTTGTGCTGCTGGGGTGCGGTGCGGCCGATGCA CATGCGGTGCGCCAGGCCATGCAAGCCTTGGCCCCCTCGTTCAAGTTGCCGTCGGTCAAGCGCGTGGCGCTGGTGTTTGG AACCTCGGCCCAGCGGGGCGCCATCGGCGCTGCGGTGCGTGCGGTGTCCGATGGGAGCTATGTCTATACGGCCACCAAGA CCAAGGCTGAGCCGCGTGCCCTGCTGCGTGTCACCCTGGGCGTGCCCGATGCGGGTGCAGCGCAGCCGGAGTTCGCCACG GCCACGGCCGTGGCGGCCGGTGTAGAGTTTGCGCGCGAGTGGGCCAATCGCCCTGCCAACCATGCGACCCCCACGCTGGT GGCCAATGCCGCCAAGACGCTTGCGAAATACCCCGGCGTCCAGTGCCAGGTGCTGGGCCCTACTGAGGTGGCCAAGCTGG GCATGGGGGCGTTTCTGGCGGTGGCTCAAGGATCCGATCAGCCGCTTCGCCTGGTGGAATTGCGCTACAACGGCGCGGCC CGCACGCAGGCTCCCGTGGTGCTGGTGGGCAAGGGCATCACGTTCGACACTGGGGGGATCTCGCTGAAACCCGCGGCGGA GATGGACGAGATGAAGTTCGACATGGGCGGGGCGGCGAGCGTCCTGGGCGTGTTCCGGGCGCTGGCGGAACTCCGGCCGG CGATCAACGTGGTGGGCCTCATTCCTGCGTGCGAAAACATGCCCGATGGTAAAGCGGTCAAGCCGGGCGATGTCGTGACG AGCATGAGCGGCCAGACTATCGAAATCCTCAACACAGACGCAGAAGGGCGTCTGGTCCTGTGCGACGCGCTGACCTACGC GGCACGCTTCAAGCCAGCCGCCGTGGTGGACATTGCCACATTGACAGGCGCTTGTGTGGTGGCGCTTGGTGGCCTGCGCA GCGGACTGTTTGCCTCCGATGACCTATTGGCGGAACAGCTCCTATCGGCAGGCGATGCCGCGCTTGACCCCTGTTGGCGT ATGCCCTTGGATGACGAGTACGCAGAAGGGCTCAAGAGCAATTTTGCCGACATGGCCAATGTCGCAGGCCGGGCCGGTGG TTCGATCACCGCCGCGAAGTTCCTGCAGCGCTTCGTCGGGGACACGCCGTGGGCACACCTGGACATTGCCGGGACGGCTT GGAAGGGCGGCGCCGCCAAGGGCGCCACCGGCCGGCCTGTGGGACTGCTGGTGCACTATCTGCTGGAGCGGGCGACGGTG AGTACCGTGAAACCCAAGCAAAAGACGCGCAGCCGCAAGTCGGTGGCTTGA
Upstream 100 bases:
>100_bases ACGACGGTGACCAGAACCACCAGGGTCGCGCCGAAGGTGCGGGCCAGCTCCTTGCGAATGGATGAATCGAATAACATTGG CTCGAAGGAAAACGCTGATT
Downstream 100 bases:
>100_bases GGGCCATGTCGTTGGAGGTGCGCGCATGACACAGGTGGCATTCCACTTCAATGCACCCGACAAACTGGCGTATGTCTGTC GCCTGGTGCGAAAAGCCACC
Product: leucyl aminopeptidase
Products: NA
Alternate protein names: Leucine aminopeptidase; LAP; Leucyl aminopeptidase
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MNFELKTLSLAAAAAYKCDLLVVLVPEGFLPGSDVLSTLTAHALKQGDLEVKPGKLLQCYAPAGVAARRVVLLGCGAADA HAVRQAMQALAPSFKLPSVKRVALVFGTSAQRGAIGAAVRAVSDGSYVYTATKTKAEPRALLRVTLGVPDAGAAQPEFAT ATAVAAGVEFAREWANRPANHATPTLVANAAKTLAKYPGVQCQVLGPTEVAKLGMGAFLAVAQGSDQPLRLVELRYNGAA RTQAPVVLVGKGITFDTGGISLKPAAEMDEMKFDMGGAASVLGVFRALAELRPAINVVGLIPACENMPDGKAVKPGDVVT SMSGQTIEILNTDAEGRLVLCDALTYAARFKPAAVVDIATLTGACVVALGGLRSGLFASDDLLAEQLLSAGDAALDPCWR MPLDDEYAEGLKSNFADMANVAGRAGGSITAAKFLQRFVGDTPWAHLDIAGTAWKGGAAKGATGRPVGLLVHYLLERATV STVKPKQKTRSRKSVA
Sequences:
>Translated_496_residues MNFELKTLSLAAAAAYKCDLLVVLVPEGFLPGSDVLSTLTAHALKQGDLEVKPGKLLQCYAPAGVAARRVVLLGCGAADA HAVRQAMQALAPSFKLPSVKRVALVFGTSAQRGAIGAAVRAVSDGSYVYTATKTKAEPRALLRVTLGVPDAGAAQPEFAT ATAVAAGVEFAREWANRPANHATPTLVANAAKTLAKYPGVQCQVLGPTEVAKLGMGAFLAVAQGSDQPLRLVELRYNGAA RTQAPVVLVGKGITFDTGGISLKPAAEMDEMKFDMGGAASVLGVFRALAELRPAINVVGLIPACENMPDGKAVKPGDVVT SMSGQTIEILNTDAEGRLVLCDALTYAARFKPAAVVDIATLTGACVVALGGLRSGLFASDDLLAEQLLSAGDAALDPCWR MPLDDEYAEGLKSNFADMANVAGRAGGSITAAKFLQRFVGDTPWAHLDIAGTAWKGGAAKGATGRPVGLLVHYLLERATV STVKPKQKTRSRKSVA >Mature_496_residues MNFELKTLSLAAAAAYKCDLLVVLVPEGFLPGSDVLSTLTAHALKQGDLEVKPGKLLQCYAPAGVAARRVVLLGCGAADA HAVRQAMQALAPSFKLPSVKRVALVFGTSAQRGAIGAAVRAVSDGSYVYTATKTKAEPRALLRVTLGVPDAGAAQPEFAT ATAVAAGVEFAREWANRPANHATPTLVANAAKTLAKYPGVQCQVLGPTEVAKLGMGAFLAVAQGSDQPLRLVELRYNGAA RTQAPVVLVGKGITFDTGGISLKPAAEMDEMKFDMGGAASVLGVFRALAELRPAINVVGLIPACENMPDGKAVKPGDVVT SMSGQTIEILNTDAEGRLVLCDALTYAARFKPAAVVDIATLTGACVVALGGLRSGLFASDDLLAEQLLSAGDAALDPCWR MPLDDEYAEGLKSNFADMANVAGRAGGSITAAKFLQRFVGDTPWAHLDIAGTAWKGGAAKGATGRPVGLLVHYLLERATV STVKPKQKTRSRKSVA
Specific function: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
COG id: COG0260
COG function: function code E; Leucyl aminopeptidase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M17 family
Homologues:
Organism=Homo sapiens, GI41393561, Length=330, Percent_Identity=43.6363636363636, Blast_Score=255, Evalue=7e-68, Organism=Homo sapiens, GI47155554, Length=314, Percent_Identity=34.3949044585987, Blast_Score=124, Evalue=2e-28, Organism=Escherichia coli, GI1790710, Length=498, Percent_Identity=44.578313253012, Blast_Score=379, Evalue=1e-106, Organism=Escherichia coli, GI87082123, Length=320, Percent_Identity=39.0625, Blast_Score=182, Evalue=6e-47, Organism=Caenorhabditis elegans, GI17556903, Length=306, Percent_Identity=34.640522875817, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17565172, Length=146, Percent_Identity=41.7808219178082, Blast_Score=95, Evalue=7e-20, Organism=Drosophila melanogaster, GI21355725, Length=318, Percent_Identity=37.7358490566038, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI24661038, Length=318, Percent_Identity=37.4213836477987, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI20129969, Length=319, Percent_Identity=37.3040752351097, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24662227, Length=325, Percent_Identity=35.6923076923077, Blast_Score=185, Evalue=8e-47, Organism=Drosophila melanogaster, GI161077148, Length=319, Percent_Identity=35.423197492163, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI20130057, Length=319, Percent_Identity=35.423197492163, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI21355645, Length=319, Percent_Identity=35.1097178683386, Blast_Score=181, Evalue=9e-46, Organism=Drosophila melanogaster, GI24662223, Length=319, Percent_Identity=35.1097178683386, Blast_Score=181, Evalue=9e-46, Organism=Drosophila melanogaster, GI20129963, Length=362, Percent_Identity=32.3204419889503, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI19922386, Length=365, Percent_Identity=32.0547945205479, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI21357381, Length=278, Percent_Identity=36.6906474820144, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI221379063, Length=278, Percent_Identity=36.6906474820144, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI221379062, Length=278, Percent_Identity=36.6906474820144, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI24646701, Length=252, Percent_Identity=31.3492063492063, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI24646703, Length=252, Percent_Identity=31.3492063492063, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI21358201, Length=252, Percent_Identity=31.3492063492063, Blast_Score=84, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AMPA_ACIET (B9MJ44)
Other databases:
- EMBL: CP001392 - RefSeq: YP_002553182.1 - MEROPS: M17.003 - GeneID: 7385289 - GenomeReviews: CP001392_GR - KEGG: dia:Dtpsy_1725 - ProtClustDB: CLSK951414 - GO: GO:0005737 - GO: GO:0006508 - HAMAP: MF_00181 - InterPro: IPR011356 - InterPro: IPR000819 - InterPro: IPR023042 - InterPro: IPR008283 - PANTHER: PTHR11963:SF3 - PRINTS: PR00481
Pfam domain/function: PF00883 Peptidase_M17; PF02789 Peptidase_M17_N
EC number: =3.4.11.1; =3.4.11.10
Molecular weight: Translated: 51286; Mature: 51286
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: PS00631 CYTOSOL_AP
Important sites: ACT_SITE 263-263 ACT_SITE 337-337
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFELKTLSLAAAAAYKCDLLVVLVPEGFLPGSDVLSTLTAHALKQGDLEVKPGKLLQCY CCCEEEHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEECCCCEEEEE APAGVAARRVVLLGCGAADAHAVRQAMQALAPSFKLPSVKRVALVFGTSAQRGAIGAAVR CCCCHHHCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHE AVSDGSYVYTATKTKAEPRALLRVTLGVPDAGAAQPEFATATAVAAGVEFAREWANRPAN EECCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC HATPTLVANAAKTLAKYPGVQCQVLGPTEVAKLGMGAFLAVAQGSDQPLRLVELRYNGAA CCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCEEEEEECCCCCCEEEEEEEECCCC RTQAPVVLVGKGITFDTGGISLKPAAEMDEMKFDMGGAASVLGVFRALAELRPAINVVGL CCCCCEEEEECCEEECCCCEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEEE IPACENMPDGKAVKPGDVVTSMSGQTIEILNTDAEGRLVLCDALTYAARFKPAAVVDIAT CCCCCCCCCCCCCCCCCCEECCCCCEEEEEECCCCCCEEEEEHHHHHHHCCCCCEEEHHH LTGACVVALGGLRSGLFASDDLLAEQLLSAGDAALDPCWRMPLDDEYAEGLKSNFADMAN HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHH VAGRAGGSITAAKFLQRFVGDTPWAHLDIAGTAWKGGAAKGATGRPVGLLVHYLLERATV HHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH STVKPKQKTRSRKSVA HCCCCHHHHHHHCCCC >Mature Secondary Structure MNFELKTLSLAAAAAYKCDLLVVLVPEGFLPGSDVLSTLTAHALKQGDLEVKPGKLLQCY CCCEEEHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEECCCCEEEEE APAGVAARRVVLLGCGAADAHAVRQAMQALAPSFKLPSVKRVALVFGTSAQRGAIGAAVR CCCCHHHCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHE AVSDGSYVYTATKTKAEPRALLRVTLGVPDAGAAQPEFATATAVAAGVEFAREWANRPAN EECCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC HATPTLVANAAKTLAKYPGVQCQVLGPTEVAKLGMGAFLAVAQGSDQPLRLVELRYNGAA CCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCEEEEEECCCCCCEEEEEEEECCCC RTQAPVVLVGKGITFDTGGISLKPAAEMDEMKFDMGGAASVLGVFRALAELRPAINVVGL CCCCCEEEEECCEEECCCCEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEEE IPACENMPDGKAVKPGDVVTSMSGQTIEILNTDAEGRLVLCDALTYAARFKPAAVVDIAT CCCCCCCCCCCCCCCCCCEECCCCCEEEEEECCCCCCEEEEEHHHHHHHCCCCCEEEHHH LTGACVVALGGLRSGLFASDDLLAEQLLSAGDAALDPCWRMPLDDEYAEGLKSNFADMAN HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHH VAGRAGGSITAAKFLQRFVGDTPWAHLDIAGTAWKGGAAKGATGRPVGLLVHYLLERATV HHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH STVKPKQKTRSRKSVA HCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA