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The map label for this gene is ybeB [C]

Identifier: 222110899

GI number: 222110899

Start: 1812706

End: 1813494

Strand: Direct

Name: ybeB [C]

Synonym: Dtpsy_1706

Alternate gene names: 222110899

Gene position: 1812706-1813494 (Clockwise)

Preceding gene: 222110898

Following gene: 222110900

Centisome position: 47.75

GC content: 66.67

Gene sequence:

>789_bases
ATGACCACTTCCAGCAAATCGGAAACCGCCGCCAAGAAAGACGTCACCAAGCTCCAGCGCGCCATCGTCGATGGCCTGGA
AGACGTCAAGGCGCAAGACATCCAGGTCTTCAACACCGAGCATCTCTCGCCGCTGTTCGAGCGCGTGGTCGTCGCCACCG
GCAGCTCCAACCGCCAGACCAAGGCGCTGGCGGCCAGCGTGCGCGACGCCGTGCGCAAGGCCGGGTTCCCCAAGCCGCGC
AGCGAGGGCGAGGACAACGGCGAATGGATCATCGTGGACTGCGGCCAGGCCGTGGTGCACGTCATGCAGCCCGCCATCCG
CCAGTACTACCGGCTGGAGGAGATCTGGGGCGAGAAGCCCGTGCGCCTGAAGCTGGGCGCTGCCAAGCCGCGCAAGATCA
TGGCCTCGGAAGGCGACGACGAGGCACCCGCGCGCAAGCCGGCCGCCAAGAAGGCCGCAGCTGGCCAGAAGCCGGCCAAG
GCGGCAGCTCCCGCGGCGGCCAAACCGGCAGCGAAATCCGCAGTGAAGACCGCATCCAAGCCCGCTGGCAAGGCACAGAA
GGCACCGGTCAAGGCCGCATCCAAACCCGCAGCGAAGAAGACCACGGCAAAGCCCGTGGCGGCGAAGAAGCCAGCTGTCA
AGAACGCGGTGAAGACCGTCGTGGTGAACAAGCCTGTGGCCAAGAAGGCACCCGCCAAGGCCGCCGCTACCACCACGGCA
CGCAAGCCGGTCGCCAAATCCACCGGCAAGGCTGTTGCGAAGAAGGCCCCCGCACGCAAGAAGGCCTAA

Upstream 100 bases:

>100_bases
TGATATCTGAAACATGCCCTGACAACCGCTCCGCGCCCCCCTTGGCCGTGGCGGTGCTTGCAGGCTATATTGATTCCATT
CCTTCACTGAAGACCACCTG

Downstream 100 bases:

>100_bases
GCCTTTCGCTGACCCATGAAGCTGCTGATCGTGGCCGTGGGCCAGCGGGTTCCCGACTGGGCGCAGACGGCCTATGACGA
CTATGCCAAGCGATTCCCGC

Product: iojap-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MTTSSKSETAAKKDVTKLQRAIVDGLEDVKAQDIQVFNTEHLSPLFERVVVATGSSNRQTKALAASVRDAVRKAGFPKPR
SEGEDNGEWIIVDCGQAVVHVMQPAIRQYYRLEEIWGEKPVRLKLGAAKPRKIMASEGDDEAPARKPAAKKAAAGQKPAK
AAAPAAAKPAAKSAVKTASKPAGKAQKAPVKAASKPAAKKTTAKPVAAKKPAVKNAVKTVVVNKPVAKKAPAKAAATTTA
RKPVAKSTGKAVAKKAPARKKA

Sequences:

>Translated_262_residues
MTTSSKSETAAKKDVTKLQRAIVDGLEDVKAQDIQVFNTEHLSPLFERVVVATGSSNRQTKALAASVRDAVRKAGFPKPR
SEGEDNGEWIIVDCGQAVVHVMQPAIRQYYRLEEIWGEKPVRLKLGAAKPRKIMASEGDDEAPARKPAAKKAAAGQKPAK
AAAPAAAKPAAKSAVKTASKPAGKAQKAPVKAASKPAAKKTTAKPVAAKKPAVKNAVKTVVVNKPVAKKAPAKAAATTTA
RKPVAKSTGKAVAKKAPARKKA
>Mature_261_residues
TTSSKSETAAKKDVTKLQRAIVDGLEDVKAQDIQVFNTEHLSPLFERVVVATGSSNRQTKALAASVRDAVRKAGFPKPRS
EGEDNGEWIIVDCGQAVVHVMQPAIRQYYRLEEIWGEKPVRLKLGAAKPRKIMASEGDDEAPARKPAAKKAAAGQKPAKA
AAPAAAKPAAKSAVKTASKPAGKAQKAPVKAASKPAAKKTTAKPVAAKKPAVKNAVKTVVVNKPVAKKAPAKAAATTTAR
KPVAKSTGKAVAKKAPARKKA

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Escherichia coli, GI87081768, Length=99, Percent_Identity=36.3636363636364, Blast_Score=81, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 27354; Mature: 27223

Theoretical pI: Translated: 11.19; Mature: 11.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSSKSETAAKKDVTKLQRAIVDGLEDVKAQDIQVFNTEHLSPLFERVVVATGSSNRQT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHH
KALAASVRDAVRKAGFPKPRSEGEDNGEWIIVDCGQAVVHVMQPAIRQYYRLEEIWGEKP
HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCC
VRLKLGAAKPRKIMASEGDDEAPARKPAAKKAAAGQKPAKAAAPAAAKPAAKSAVKTASK
EEEEECCCCCHHHHCCCCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHCC
PAGKAQKAPVKAASKPAAKKTTAKPVAAKKPAVKNAVKTVVVNKPVAKKAPAKAAATTTA
CCCCCHHCCCHHCCCCCHHHHCCCCCHHCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHH
RKPVAKSTGKAVAKKAPARKKA
HCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TTSSKSETAAKKDVTKLQRAIVDGLEDVKAQDIQVFNTEHLSPLFERVVVATGSSNRQT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHH
KALAASVRDAVRKAGFPKPRSEGEDNGEWIIVDCGQAVVHVMQPAIRQYYRLEEIWGEKP
HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCC
VRLKLGAAKPRKIMASEGDDEAPARKPAAKKAAAGQKPAKAAAPAAAKPAAKSAVKTASK
EEEEECCCCCHHHHCCCCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHCC
PAGKAQKAPVKAASKPAAKKTTAKPVAAKKPAVKNAVKTVVVNKPVAKKAPAKAAATTTA
CCCCCHHCCCHHCCCCCHHHHCCCCCHHCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHH
RKPVAKSTGKAVAKKAPARKKA
HCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]