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The map label for this gene is ygiQ [C]

Identifier: 222110826

GI number: 222110826

Start: 1720969

End: 1723458

Strand: Direct

Name: ygiQ [C]

Synonym: Dtpsy_1631

Alternate gene names: 222110826

Gene position: 1720969-1723458 (Clockwise)

Preceding gene: 222110822

Following gene: 222110828

Centisome position: 45.33

GC content: 67.75

Gene sequence:

>2490_bases
ATGAACGCCCCGATCGATGTCTCCTTCTTCCCGCGCAACGCCAAGCCGTTGACCAGCTACCGCCCGTATTGGGCCAAGCG
CTTTGGCGTGGCGCCGTACCTGCCCATGAGCCGTGCCGAGATGGAGCAGTTGGGCTGGGACAGCTGCGACGTGGTGCTGG
TGACGGGCGATGCCTATGTGGACCACCCGAGCTTCGGCATGGCGGTGATCGGGCGGGTGCTGGAGGCGCAGGGCTTTCGC
GTGGGGATCATTGCGCAGCCGGACTGGCAGAGCGCCGACGCGTTCAAGGTGCTGGGCAAGCCCAACCTGTTCTGGGGCGT
GACCGCGGGCAACATGGATTCGATGATCAACCGCTACACGGCGGACCGCAAGATCCGCAGCGACGACGCTTATACGCCCG
GCGACGTGGGCGGCAAGCGGCCCGACCGCGCCGCCGTGGTCTACAGCCAGCGCTGCCGCGAGGCGTACAAGGACGTGCCC
ATCGTGCTGGGCGGCATCGAAGGCTCTCTGCGCCGCATCGCCCACTATGACTACTGGAGCGACAAGGTGCGCCGCTCCAT
CGTGGTGGACAGCAAGTGCGACATCCTGCTGTTCGGCAATGCCGAGCGCGCCCTGGTCGAAGTGGCCCACCGCATTGCGC
GGCGCGACCCGGTGGAGACCATCACCGACGTGCGCGGCACGGCCTTCGTGCGGCGCGCGTCCGAGCCCGGATGGTTCGAG
ATCGACTCCACCGAGGTGGACGAGCCCGGCCGCGTGGATGAGCTGATCAATCCCTACATGACCACCAGCGAGCAGGCCGC
AGCCCAGGGCCAGGCGTGTTCGCAGGAAGATGCTGCAAATTCAATAGCTGCCAGCGCTGATCCACAAAGCGCTGCAGGCC
AAAAACCCTTGCAGACCGTGCAGATCGTGCCCAACCCGGCGCTGCCCTCCAAGGGGCGCAGCGGTCGGGCGCTGCCGCCG
CGCGAGCGCACCGTGATCCGCCTGCCCAGCTACGAGCAGGTGAAGGCCGACCCGGTGCTCTACGCCCACGCCAACCGCGT
GCTGCACCTGGAGACCAACCCCGGCAACGCCCGCGCGCTGGTGCAGGCGCACGGCGAGGGCGCAACGGCGCGCGACGTGT
GGCTGAACCCGCCGCCCGTCCCGCTCACCACGGCCGAGATGGACTGGGTGTTCGGCCTGCCGTATGCGCGCAACCCGCAC
CCGCAGTACTTGGACGCGCAGGGCAGCTACGAGGGGCCCACCAAGATCCCGGCATGGGAGATGATCCGCGCGTCGATCAA
CATCATGCGCGGCTGCTTTGGCGGCTGCACCTTCTGCTCCATCACCGAGCACGAGGGACGCATCATCCAGAGCCGCTCGG
AGGATTCCATCATTGCCGAGGTGGAGGACATCCGGGACAAGGTCAAGGGCTTCACCGGCACCATCTCCGACCTGGGCGGC
CCCACGGCCAACATGTACCGCCTGGGCTGCAAGAGCCCAGAGATCGAGGCCGCCTGCCGCAAGCCGAGCTGCGTGTTTCC
CGGCATCTGCCAGAACCTGCACACGGACCATGCGCCGCTGGTCAATATCTACCGCCGCGCGCGCAAGCTGCCGGGCATCA
AGAAGATCCTCATCGGCTCCGGCCTGCGCTACGACCTGGCCGTGAAGTCCCCCGAATACGTGAAGGAGCTGGTACAGCAC
CACGTGGGCGGGTACCTCAAGATCGCGCCCGAGCACACCGAGGCGGGGCCGCTGTCCAAGATGATGAAGCCAGGCATCGG
CAACTATGACCGCTTCAAGCAGATGTTCGAGCAGTACACCGAAGAGGCGGGCAAGAAACAGTTCCTGATCCCGTACTTCA
TCGCCGCCCACCCCGGCACCACCGACGAGGACATGTTGAACCTGGCCATCTGGCTCAAGAAGAACGGCTTTCGCGCCGAC
CAGGTGCAGGCCTTCTACCCCAGCCCCATGGCCAGCGCCACGGCCATGTACCACTCGGGCCGCAACCCGCTCACGCGCGT
GCGACGGCAGATGCGCGACGTGGCCGAGGAACAGGTGGACGTGGTGCGTGGCGAAAAGCGCCGCCGCCTGCACAAGGCCT
TCCTGCGCTACCACGATCCCAACAACTGGCCGCTGCTGCGCGAGGCGCTGAAAAGCATGGGCCGGGCCGACCTGATCGGC
AACGGCAAGCACCACCTGATCCCCACCTTCCAGCCGCTGGTCGACGGCAGCTACCAAAGCGCCCGCAAGAAAAACAGCAC
CGGGCCCAAGGGTGGCGGGGCCGGCGTGGGCTACACCATCAACAAGGACGGCAAGGCCGTGGCGCTGCGCCGCCGCCCGC
AGGAGCTGGAGGAGCCGCAGGGCGACGTACGTTTTCGTAGCAGTGCGCCGCAGCCGGGCCGCATGCTCACGCAGAACACC
GGCCTGCCGCCGCGTGCGGGCACCGCGGGGCGCCGGCAGGGCGGGGCCGGCACCCCGGCGTCGGGCAAGGGTACGGGCCG
GCGGCGCTGA

Upstream 100 bases:

>100_bases
TTACCCCATGGGCCGACGGCGACAAGGGCCATGCGGGGGCGGTTAGGCGCAAAGGGGGCATGGCTTCTAAAATGCCCGGC
CCTCACCTGCAGGCCCGCCC

Downstream 100 bases:

>100_bases
CGGGGCGGCACCCGGCCGTCAGCGCGCGGGACCGGCGGGGGCGGGCACCAGTTCCTCAATGATCAGGCGGCGGTAGTAGA
ACGCCGCCAGCGGGCCCAGC

Product: radical sam domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 829; Mature: 829

Protein sequence:

>829_residues
MNAPIDVSFFPRNAKPLTSYRPYWAKRFGVAPYLPMSRAEMEQLGWDSCDVVLVTGDAYVDHPSFGMAVIGRVLEAQGFR
VGIIAQPDWQSADAFKVLGKPNLFWGVTAGNMDSMINRYTADRKIRSDDAYTPGDVGGKRPDRAAVVYSQRCREAYKDVP
IVLGGIEGSLRRIAHYDYWSDKVRRSIVVDSKCDILLFGNAERALVEVAHRIARRDPVETITDVRGTAFVRRASEPGWFE
IDSTEVDEPGRVDELINPYMTTSEQAAAQGQACSQEDAANSIAASADPQSAAGQKPLQTVQIVPNPALPSKGRSGRALPP
RERTVIRLPSYEQVKADPVLYAHANRVLHLETNPGNARALVQAHGEGATARDVWLNPPPVPLTTAEMDWVFGLPYARNPH
PQYLDAQGSYEGPTKIPAWEMIRASINIMRGCFGGCTFCSITEHEGRIIQSRSEDSIIAEVEDIRDKVKGFTGTISDLGG
PTANMYRLGCKSPEIEAACRKPSCVFPGICQNLHTDHAPLVNIYRRARKLPGIKKILIGSGLRYDLAVKSPEYVKELVQH
HVGGYLKIAPEHTEAGPLSKMMKPGIGNYDRFKQMFEQYTEEAGKKQFLIPYFIAAHPGTTDEDMLNLAIWLKKNGFRAD
QVQAFYPSPMASATAMYHSGRNPLTRVRRQMRDVAEEQVDVVRGEKRRRLHKAFLRYHDPNNWPLLREALKSMGRADLIG
NGKHHLIPTFQPLVDGSYQSARKKNSTGPKGGGAGVGYTINKDGKAVALRRRPQELEEPQGDVRFRSSAPQPGRMLTQNT
GLPPRAGTAGRRQGGAGTPASGKGTGRRR

Sequences:

>Translated_829_residues
MNAPIDVSFFPRNAKPLTSYRPYWAKRFGVAPYLPMSRAEMEQLGWDSCDVVLVTGDAYVDHPSFGMAVIGRVLEAQGFR
VGIIAQPDWQSADAFKVLGKPNLFWGVTAGNMDSMINRYTADRKIRSDDAYTPGDVGGKRPDRAAVVYSQRCREAYKDVP
IVLGGIEGSLRRIAHYDYWSDKVRRSIVVDSKCDILLFGNAERALVEVAHRIARRDPVETITDVRGTAFVRRASEPGWFE
IDSTEVDEPGRVDELINPYMTTSEQAAAQGQACSQEDAANSIAASADPQSAAGQKPLQTVQIVPNPALPSKGRSGRALPP
RERTVIRLPSYEQVKADPVLYAHANRVLHLETNPGNARALVQAHGEGATARDVWLNPPPVPLTTAEMDWVFGLPYARNPH
PQYLDAQGSYEGPTKIPAWEMIRASINIMRGCFGGCTFCSITEHEGRIIQSRSEDSIIAEVEDIRDKVKGFTGTISDLGG
PTANMYRLGCKSPEIEAACRKPSCVFPGICQNLHTDHAPLVNIYRRARKLPGIKKILIGSGLRYDLAVKSPEYVKELVQH
HVGGYLKIAPEHTEAGPLSKMMKPGIGNYDRFKQMFEQYTEEAGKKQFLIPYFIAAHPGTTDEDMLNLAIWLKKNGFRAD
QVQAFYPSPMASATAMYHSGRNPLTRVRRQMRDVAEEQVDVVRGEKRRRLHKAFLRYHDPNNWPLLREALKSMGRADLIG
NGKHHLIPTFQPLVDGSYQSARKKNSTGPKGGGAGVGYTINKDGKAVALRRRPQELEEPQGDVRFRSSAPQPGRMLTQNT
GLPPRAGTAGRRQGGAGTPASGKGTGRRR
>Mature_829_residues
MNAPIDVSFFPRNAKPLTSYRPYWAKRFGVAPYLPMSRAEMEQLGWDSCDVVLVTGDAYVDHPSFGMAVIGRVLEAQGFR
VGIIAQPDWQSADAFKVLGKPNLFWGVTAGNMDSMINRYTADRKIRSDDAYTPGDVGGKRPDRAAVVYSQRCREAYKDVP
IVLGGIEGSLRRIAHYDYWSDKVRRSIVVDSKCDILLFGNAERALVEVAHRIARRDPVETITDVRGTAFVRRASEPGWFE
IDSTEVDEPGRVDELINPYMTTSEQAAAQGQACSQEDAANSIAASADPQSAAGQKPLQTVQIVPNPALPSKGRSGRALPP
RERTVIRLPSYEQVKADPVLYAHANRVLHLETNPGNARALVQAHGEGATARDVWLNPPPVPLTTAEMDWVFGLPYARNPH
PQYLDAQGSYEGPTKIPAWEMIRASINIMRGCFGGCTFCSITEHEGRIIQSRSEDSIIAEVEDIRDKVKGFTGTISDLGG
PTANMYRLGCKSPEIEAACRKPSCVFPGICQNLHTDHAPLVNIYRRARKLPGIKKILIGSGLRYDLAVKSPEYVKELVQH
HVGGYLKIAPEHTEAGPLSKMMKPGIGNYDRFKQMFEQYTEEAGKKQFLIPYFIAAHPGTTDEDMLNLAIWLKKNGFRAD
QVQAFYPSPMASATAMYHSGRNPLTRVRRQMRDVAEEQVDVVRGEKRRRLHKAFLRYHDPNNWPLLREALKSMGRADLIG
NGKHHLIPTFQPLVDGSYQSARKKNSTGPKGGGAGVGYTINKDGKAVALRRRPQELEEPQGDVRFRSSAPQPGRMLTQNT
GLPPRAGTAGRRQGGAGTPASGKGTGRRR

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=733, Percent_Identity=61.2551159618008, Blast_Score=932, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 91629; Mature: 91629

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPIDVSFFPRNAKPLTSYRPYWAKRFGVAPYLPMSRAEMEQLGWDSCDVVLVTGDAYV
CCCCCEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEE
DHPSFGMAVIGRVLEAQGFRVGIIAQPDWQSADAFKVLGKPNLFWGVTAGNMDSMINRYT
CCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHEECCCCCEEEEECCCCHHHHHHHHH
ADRKIRSDDAYTPGDVGGKRPDRAAVVYSQRCREAYKDVPIVLGGIEGSLRRIAHYDYWS
HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCHHH
DKVRRSIVVDSKCDILLFGNAERALVEVAHRIARRDPVETITDVRGTAFVRRASEPGWFE
HHHHHHEEECCCCCEEEECCCHHHHHHHHHHHHHCCHHHHHHHCCHHHHEEECCCCCCEE
IDSTEVDEPGRVDELINPYMTTSEQAAAQGQACSQEDAANSIAASADPQSAAGQKPLQTV
ECCCCCCCCCCHHHHHCCHHCCCHHHHHCCCCCCHHHHHHHHCCCCCCCHHCCCCCCEEE
QIVPNPALPSKGRSGRALPPRERTVIRLPSYEQVKADPVLYAHANRVLHLETNPGNARAL
EECCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHCCCCEEEEECCEEEEEECCCCCCEEE
VQAHGEGATARDVWLNPPPVPLTTAEMDWVFGLPYARNPHPQYLDAQGSYEGPTKIPAWE
EEECCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCCCCCCCEECCCCCCCCCCCCCHHH
MIRASINIMRGCFGGCTFCSITEHEGRIIQSRSEDSIIAEVEDIRDKVKGFTGTISDLGG
HHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCHHHCCC
PTANMYRLGCKSPEIEAACRKPSCVFPGICQNLHTDHAPLVNIYRRARKLPGIKKILIGS
CCCCEEEECCCCCCHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHCC
GLRYDLAVKSPEYVKELVQHHVGGYLKIAPEHTEAGPLSKMMKPGIGNYDRFKQMFEQYT
CCEEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHH
EEAGKKQFLIPYFIAAHPGTTDEDMLNLAIWLKKNGFRADQVQAFYPSPMASATAMYHSG
HHCCCCEEEEEEEEECCCCCCHHHHEEEEEEEECCCCCHHHEEEECCCCHHHHHHHHHCC
RNPLTRVRRQMRDVAEEQVDVVRGEKRRRLHKAFLRYHDPNNWPLLREALKSMGRADLIG
CCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEC
NGKHHLIPTFQPLVDGSYQSARKKNSTGPKGGGAGVGYTINKDGKAVALRRRPQELEEPQ
CCCCCCCCCHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEECCCCHHHHCCC
GDVRFRSSAPQPGRMLTQNTGLPPRAGTAGRRQGGAGTPASGKGTGRRR
CCEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNAPIDVSFFPRNAKPLTSYRPYWAKRFGVAPYLPMSRAEMEQLGWDSCDVVLVTGDAYV
CCCCCEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEE
DHPSFGMAVIGRVLEAQGFRVGIIAQPDWQSADAFKVLGKPNLFWGVTAGNMDSMINRYT
CCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHEECCCCCEEEEECCCCHHHHHHHHH
ADRKIRSDDAYTPGDVGGKRPDRAAVVYSQRCREAYKDVPIVLGGIEGSLRRIAHYDYWS
HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCHHH
DKVRRSIVVDSKCDILLFGNAERALVEVAHRIARRDPVETITDVRGTAFVRRASEPGWFE
HHHHHHEEECCCCCEEEECCCHHHHHHHHHHHHHCCHHHHHHHCCHHHHEEECCCCCCEE
IDSTEVDEPGRVDELINPYMTTSEQAAAQGQACSQEDAANSIAASADPQSAAGQKPLQTV
ECCCCCCCCCCHHHHHCCHHCCCHHHHHCCCCCCHHHHHHHHCCCCCCCHHCCCCCCEEE
QIVPNPALPSKGRSGRALPPRERTVIRLPSYEQVKADPVLYAHANRVLHLETNPGNARAL
EECCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHCCCCEEEEECCEEEEEECCCCCCEEE
VQAHGEGATARDVWLNPPPVPLTTAEMDWVFGLPYARNPHPQYLDAQGSYEGPTKIPAWE
EEECCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCCCCCCCEECCCCCCCCCCCCCHHH
MIRASINIMRGCFGGCTFCSITEHEGRIIQSRSEDSIIAEVEDIRDKVKGFTGTISDLGG
HHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCHHHCCC
PTANMYRLGCKSPEIEAACRKPSCVFPGICQNLHTDHAPLVNIYRRARKLPGIKKILIGS
CCCCEEEECCCCCCHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHCC
GLRYDLAVKSPEYVKELVQHHVGGYLKIAPEHTEAGPLSKMMKPGIGNYDRFKQMFEQYT
CCEEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHH
EEAGKKQFLIPYFIAAHPGTTDEDMLNLAIWLKKNGFRADQVQAFYPSPMASATAMYHSG
HHCCCCEEEEEEEEECCCCCCHHHHEEEEEEEECCCCCHHHEEEECCCCHHHHHHHHHCC
RNPLTRVRRQMRDVAEEQVDVVRGEKRRRLHKAFLRYHDPNNWPLLREALKSMGRADLIG
CCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEC
NGKHHLIPTFQPLVDGSYQSARKKNSTGPKGGGAGVGYTINKDGKAVALRRRPQELEEPQ
CCCCCCCCCHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEECCCCHHHHCCC
GDVRFRSSAPQPGRMLTQNTGLPPRAGTAGRRQGGAGTPASGKGTGRRR
CCEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]