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The map label for this gene is ygaF [C]

Identifier: 222110822

GI number: 222110822

Start: 1717192

End: 1718319

Strand: Direct

Name: ygaF [C]

Synonym: Dtpsy_1627

Alternate gene names: 222110822

Gene position: 1717192-1718319 (Clockwise)

Preceding gene: 222110821

Following gene: 222110826

Centisome position: 45.23

GC content: 72.78

Gene sequence:

>1128_bases
ATGCAACCCTATGACTTTGTGATCATCGGCGCGGGCATTGCCGGCGCCTCCGCCGGTTGGGAACTGGCCGCGCACCGCCG
CGTGCTGCTGCTGGAGCGCGAGGCCCAGCCCGGCTACCACACCACCGGCCGGTCGGCTGCGCTGTACTCGGCCACCTATG
GCACGCCCAACATCTGCGCACTCACACGGGCCAGCCGCGCGTTCTACGATGCGCCGCCGCCCGAATTCGGCAGCGCCCCC
ATCCTCACGCCGCGCGGCGTGGTGTACCTGGCGGGGCCCGACCAGCTCGACCTGCTGGAAGCCGCCTACGCCGAGGCGCT
GCCGCGCAACCCGCAGGTGCGCCGCCTGACGCGCGAGGAGCTGCTGGAGCAGGCCCCGTGCCTGCGCCCCGAGGCCGTGG
CCGCGGGCATGAGCGAGCCCGGCGCCGCCGACATCGACGTGCATGCGCTGCACCAGGGCTACCTGCGCGGCCTGCGCCAG
CGTGGCGGCGAGATCCGCACCCATGCCGAGGTGACGGCCCTGCAGCGGGGCGAGGAGGGCTGGCACATCACCCTGGCCGA
TGGCGAGGTGCTGCACGCGCGCGCCGTGGTCAATGCCGCAGGCGCCTGGGCCGACGTGGTGGCAGCCCAGGCGGGCGTGC
CGCCCATCGGGCTGGAGCCGCGCCGGCGCACGGCCTTTACCTTCCCCGTGCCGGCCGGCATGCAAGCGGCCCACTGGCCC
GCTGTCATCGGCATTGCCGAGGACTATTACTTCAAGCCCGACGCGGGGCAGATGCTGGGCTCCCCCGCCAATGCCGATGC
CGTGGCGCCGCACGACGTGGTGCCTGAGGAACTGGACGTGGCCATGGGCATCCACCGCATCGAGCAGGTGACGTGCTTTC
AGATCCGCCGCCCCTCGCACACCTGGGCGGGGTTGCGCTCGTTCGTGGCCGATGGCGACCTGGTCATTGGCTGGGACAAC
CATGTACCCGGCTTCTTCTGGCTGGCCGCGCAAGGCGGCTATGGCATCCAGAGCGCGGCGGGCGCGGCGCTGCTGACGCG
GCAGTTGGCACTGGGCGAGCCGCTGGCCCCCGAGTTGGCGCGCGAGGGTGTGGACGTGGCGGGCCTGTCGCCTGCGCGGC
TGCGCTGA

Upstream 100 bases:

>100_bases
CGCGCCGGACCCCGATGACGCGCGCGGCGTGCCGCGGCTGGGCGCACGCGGTACCGCGGAGCAGGCGTCGGCGGTCTGAC
AGTGATTGGCGAGGGAACTC

Downstream 100 bases:

>100_bases
GCAAGGCCAGAGCTGAAGCTGCCCTGAGCCGCCGGAAAAGCCAGCGCGCCGTGCGCGTCAGGCGTAGGTGTTGAGCTGCG
TGCCCAGCGGGCCTTCGGTC

Product: fad dependent oxidoreductase

Products: NA

Alternate protein names: Oxidoreductase; Glycine/D-Amino Acid Oxidase; Amino Acid Oxidase; FAD-Dependent Oxidoreductase; FAD Dependent Oxidoreductase Domain-Containing Protein; Glycine Oxidase; FAD Dependent Oxidoreductase Family; Oxidase; FAD-Dependent Glycerol-3-Phosphate Dehydrogenase Protein; Fad Dependent Oxidoreductase

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MQPYDFVIIGAGIAGASAGWELAAHRRVLLLEREAQPGYHTTGRSAALYSATYGTPNICALTRASRAFYDAPPPEFGSAP
ILTPRGVVYLAGPDQLDLLEAAYAEALPRNPQVRRLTREELLEQAPCLRPEAVAAGMSEPGAADIDVHALHQGYLRGLRQ
RGGEIRTHAEVTALQRGEEGWHITLADGEVLHARAVVNAAGAWADVVAAQAGVPPIGLEPRRRTAFTFPVPAGMQAAHWP
AVIGIAEDYYFKPDAGQMLGSPANADAVAPHDVVPEELDVAMGIHRIEQVTCFQIRRPSHTWAGLRSFVADGDLVIGWDN
HVPGFFWLAAQGGYGIQSAAGAALLTRQLALGEPLAPELAREGVDVAGLSPARLR

Sequences:

>Translated_375_residues
MQPYDFVIIGAGIAGASAGWELAAHRRVLLLEREAQPGYHTTGRSAALYSATYGTPNICALTRASRAFYDAPPPEFGSAP
ILTPRGVVYLAGPDQLDLLEAAYAEALPRNPQVRRLTREELLEQAPCLRPEAVAAGMSEPGAADIDVHALHQGYLRGLRQ
RGGEIRTHAEVTALQRGEEGWHITLADGEVLHARAVVNAAGAWADVVAAQAGVPPIGLEPRRRTAFTFPVPAGMQAAHWP
AVIGIAEDYYFKPDAGQMLGSPANADAVAPHDVVPEELDVAMGIHRIEQVTCFQIRRPSHTWAGLRSFVADGDLVIGWDN
HVPGFFWLAAQGGYGIQSAAGAALLTRQLALGEPLAPELAREGVDVAGLSPARLR
>Mature_375_residues
MQPYDFVIIGAGIAGASAGWELAAHRRVLLLEREAQPGYHTTGRSAALYSATYGTPNICALTRASRAFYDAPPPEFGSAP
ILTPRGVVYLAGPDQLDLLEAAYAEALPRNPQVRRLTREELLEQAPCLRPEAVAAGMSEPGAADIDVHALHQGYLRGLRQ
RGGEIRTHAEVTALQRGEEGWHITLADGEVLHARAVVNAAGAWADVVAAQAGVPPIGLEPRRRTAFTFPVPAGMQAAHWP
AVIGIAEDYYFKPDAGQMLGSPANADAVAPHDVVPEELDVAMGIHRIEQVTCFQIRRPSHTWAGLRSFVADGDLVIGWDN
HVPGFFWLAAQGGYGIQSAAGAALLTRQLALGEPLAPELAREGVDVAGLSPARLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40003; Mature: 40003

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPYDFVIIGAGIAGASAGWELAAHRRVLLLEREAQPGYHTTGRSAALYSATYGTPNICA
CCCCEEEEEECCCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEE
LTRASRAFYDAPPPEFGSAPILTPRGVVYLAGPDQLDLLEAAYAEALPRNPQVRRLTREE
EHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHH
LLEQAPCLRPEAVAAGMSEPGAADIDVHALHQGYLRGLRQRGGEIRTHAEVTALQRGEEG
HHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCC
WHITLADGEVLHARAVVNAAGAWADVVAAQAGVPPIGLEPRRRTAFTFPVPAGMQAAHWP
CEEEEECCCEEEHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
AVIGIAEDYYFKPDAGQMLGSPANADAVAPHDVVPEELDVAMGIHRIEQVTCFQIRRPSH
EEEEECCCCEECCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCC
TWAGLRSFVADGDLVIGWDNHVPGFFWLAAQGGYGIQSAAGAALLTRQLALGEPLAPELA
HHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHH
REGVDVAGLSPARLR
HCCCCCCCCCHHCCC
>Mature Secondary Structure
MQPYDFVIIGAGIAGASAGWELAAHRRVLLLEREAQPGYHTTGRSAALYSATYGTPNICA
CCCCEEEEEECCCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEE
LTRASRAFYDAPPPEFGSAPILTPRGVVYLAGPDQLDLLEAAYAEALPRNPQVRRLTREE
EHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHH
LLEQAPCLRPEAVAAGMSEPGAADIDVHALHQGYLRGLRQRGGEIRTHAEVTALQRGEEG
HHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCC
WHITLADGEVLHARAVVNAAGAWADVVAAQAGVPPIGLEPRRRTAFTFPVPAGMQAAHWP
CEEEEECCCEEEHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
AVIGIAEDYYFKPDAGQMLGSPANADAVAPHDVVPEELDVAMGIHRIEQVTCFQIRRPSH
EEEEECCCCEECCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCC
TWAGLRSFVADGDLVIGWDNHVPGFFWLAAQGGYGIQSAAGAALLTRQLALGEPLAPELA
HHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHH
REGVDVAGLSPARLR
HCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA