| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is quiP [H]
Identifier: 222110789
GI number: 222110789
Start: 1686370
End: 1688880
Strand: Direct
Name: quiP [H]
Synonym: Dtpsy_1594
Alternate gene names: 222110789
Gene position: 1686370-1688880 (Clockwise)
Preceding gene: 222110788
Following gene: 222110790
Centisome position: 44.42
GC content: 73.36
Gene sequence:
>2511_bases ATGGGCAGATTGCAACGCATCGGCGCAGGCGCCGTGGTGGCGCTGGTGGCAGCGCTGCTGCTGGCCGGCAGCGTGGCCGC GGTATATGCGCTGCGCAGCTTCCCGCAACTGGACGGGGCGCTGCGCGCCGCCGGGCTGCAGCACGCCGTGGCGGTGCGCC GCGACGAAGCCGACGTAACGCACATCGAGGCGCAGACGCCCTGGGACGCGTGGTTCGCCATGGGCTACGTGCATGCGCAG GAGCGCACCTGGCAACTGGAGTTCAACCGCCGGCTGATGCACGGCGAGCTGTCCGAGATCCTCGGCCCCGCCACGCTGGA CACCGACAAGCTCATGCGCACGCTGGACATCATGGGCGCGGCGCGCCGCCAGTACGCCGCGCTGCCCGCGTTCGCGCGCG AGGCGCTGCAGGCCTACAGCCGGGGCATCCAGTCCTTCCACGCGGCGCGGACCCAGGCGCTGCCGCCGGAGTTTTTGCTG CTGGGTGCGCGGCCCGGCGGTGCGCAGGGTGTGGCCTGGGCGCCTGAGGACAGTGTGGCCTGGGCGCTGATGATGGCGCT GGACCTGGGCGGCAACTGGGGCAACGAGTTCGCGCGCCTGTCGCTGGCGGCCACGCTGCCCACCGAGCGGCTGTGGCAGC TCATGCCGCCCTATCTTGGCGAGGCACCCGCGACGGCGGTGGACCTGCAGGCGCTGTACCGGTCGCTGGGCGTGTACCGC ACGCCGCAGGCGGCTGCACCGGCACCGCAGGCCGATGCCGAGTCCGCAGGCGAAGGCGCGGCGCAGGCGCTGCAGGCCTG GTCGCAGGACTTCGTGGCGGGACTGGGCACGCCCGGCGGGCGCGGCAGCAACAACTGGGTGCTGGACGGCACGCGCACGG CCAGCGGCCGGCCGCTGCTGGCCAACGACCCGCACTTGGGCCTGGGCGCGCCGGCGCTGTGGTACTTCGCGCACCTGAAG GCGCCGCAGGGCAGGGCGTCCGACGGCACGCCCGTCGCGGCCATCGACGTGATCGGCGCCACTTTGCCGGGCCTGCCCTT CGTGGTGCTGGGCCGCACGGCCGAGGTGGCCTGGGGCTTCACCAACACCGCGCCCGATGTGCAGGACCTGTACATCGAGG CCATCCACCCCGACGACCCCACGCGCTACCGCACGCCCGAGGGTTGGCAGGGCTTCGAGCAGCGCGAGCACGTGATCCGC GTGAAGGGCCGCCCTGATGTGCGCCACACCGTGCGCAGCACGCGCCATGGGCCGGTGATCAGCGATGCGCAGCCCGCGCT GCACGGCAGCGTGCTGGACCTGCGCCGGCATGTGATCGCGCTGCGCTGGAGCGCACTGGATGCCGACAATTACACCGTGC TGGCGGGCCTGCTGAGCAACCAGGCGCGCTCGGTGGAGGAGCTCTTCGCAGGCATGGCGCACTACCACTCGCCCATGCAG AGCGTGGTGGCGGCGGACGTGCATGGCGCGATCCGCTTCCAGGCCTTTGGGCGCGTGCCCCTGCGTGCGGCCGGCAACGA CCTGCGCGGCGTGGCCCCGGCGCCGGGCTGGGAGGCGCGCTACGACTGGCAGGGCTGGCTGCCCCTGGCGCAGACGCCGC AGGACGACGGCGGCGCGCGCGGCTGGATCGCCACGGCCAACCAGCGCATCACGGCGCCGGGCTATCCGCACTTCCTGACG CAGGACTGGGCCTTGCCCTACCGCTACCAACGCATAGAGCAGCAGCTGGAGGCACGGCGCCTGCACGACCTGCCGTCCCT GCGCGCGCTGCAGGGCGACACGGTGTCCCCCGCCGCGCTGCGCCTGTTGCCCCATTTGCTGGCGGCTCCGGTTTCGCAGC CGCTGGCGCGGCAGGCCCAGGCGCTGCTGCGCGGCTTTGACGGCGACATGCGCGCCGACCGCGCGGCGCCGCTCATCCTG TCGGTGTGGGCCGACGAGCTCACGCGCGCACTGGTCGTGCCCCGCGTGGGTGAGGAGCGCTTTGCCGCCACCTACGGCCG GCGGGACTTCCGTTCGGGCCTGGAAGGCATGCTGGAGCGCGGCGACACCTGGTGGTGCCCGCCCCACGGCTGCGCCGCAC ATGCCGGCGCGGCGCTGGAGCGTACCGTGCAGCGCCTGGCCGCGCGCTATGGCAACCAGCCCGAGCGCTGGACGTGGGGC GCGGCGCATCCGGCGCTTTCCGTGCACAAGCCGCTGGGCAGCGTGCCCGTGCTGTCGCGCTGGTTCAACGTGGGCGTGCC CTCGGGGGGCGATGCGTACAGCGTCAACGTGGGCCAGTACAACGCTGCGCAGCCCGTGGAGCCCTTCGCCAGCCGGCACG CGCCCTCGCTGCGCGCGCTGTACGACCTGCAGGACCCGGAGCGTTCGCTGTTCATTTACCAGACGGGTCAGAGCGGGCTG GTGTTCTCGCCGCGCTACGCCGACATGGCCCAGGCCTGGGCCGGCGGCGGCTACCGCGCCTTGCAGCGCCAGCCGCGCCG CTACGTGCACCAGCTGCAGCTGCGCCCCTAG
Upstream 100 bases:
>100_bases TGCCCACTGAGATGCTATTGATTTAAGAGCTGCCGGCGCTTTGAGGGTGGGCGCGATAGCAGGTTTTGGCTTAAAACGCC GCGACGGCGGGGGAGGCGGC
Downstream 100 bases:
>100_bases ACACCGGGCGGGCGCACGCCGCGGTGCCGCTTGTCACGCCTGTCACGCCTGTCGCATTACAGTGGCACGGACAACCCTGA AGGAGAGCCGTCCATGACCA
Product: peptidase s45 penicillin amidase
Products: NA
Alternate protein names: AHL acylase quiP; Acyl-HSL acylase quiP; Quorum signal utilization and inactivation protein; Acyl-HSL acylase quiP subunit alpha; Acyl-HSL acylase quiP subunit beta [H]
Number of amino acids: Translated: 836; Mature: 835
Protein sequence:
>836_residues MGRLQRIGAGAVVALVAALLLAGSVAAVYALRSFPQLDGALRAAGLQHAVAVRRDEADVTHIEAQTPWDAWFAMGYVHAQ ERTWQLEFNRRLMHGELSEILGPATLDTDKLMRTLDIMGAARRQYAALPAFAREALQAYSRGIQSFHAARTQALPPEFLL LGARPGGAQGVAWAPEDSVAWALMMALDLGGNWGNEFARLSLAATLPTERLWQLMPPYLGEAPATAVDLQALYRSLGVYR TPQAAAPAPQADAESAGEGAAQALQAWSQDFVAGLGTPGGRGSNNWVLDGTRTASGRPLLANDPHLGLGAPALWYFAHLK APQGRASDGTPVAAIDVIGATLPGLPFVVLGRTAEVAWGFTNTAPDVQDLYIEAIHPDDPTRYRTPEGWQGFEQREHVIR VKGRPDVRHTVRSTRHGPVISDAQPALHGSVLDLRRHVIALRWSALDADNYTVLAGLLSNQARSVEELFAGMAHYHSPMQ SVVAADVHGAIRFQAFGRVPLRAAGNDLRGVAPAPGWEARYDWQGWLPLAQTPQDDGGARGWIATANQRITAPGYPHFLT QDWALPYRYQRIEQQLEARRLHDLPSLRALQGDTVSPAALRLLPHLLAAPVSQPLARQAQALLRGFDGDMRADRAAPLIL SVWADELTRALVVPRVGEERFAATYGRRDFRSGLEGMLERGDTWWCPPHGCAAHAGAALERTVQRLAARYGNQPERWTWG AAHPALSVHKPLGSVPVLSRWFNVGVPSGGDAYSVNVGQYNAAQPVEPFASRHAPSLRALYDLQDPERSLFIYQTGQSGL VFSPRYADMAQAWAGGGYRALQRQPRRYVHQLQLRP
Sequences:
>Translated_836_residues MGRLQRIGAGAVVALVAALLLAGSVAAVYALRSFPQLDGALRAAGLQHAVAVRRDEADVTHIEAQTPWDAWFAMGYVHAQ ERTWQLEFNRRLMHGELSEILGPATLDTDKLMRTLDIMGAARRQYAALPAFAREALQAYSRGIQSFHAARTQALPPEFLL LGARPGGAQGVAWAPEDSVAWALMMALDLGGNWGNEFARLSLAATLPTERLWQLMPPYLGEAPATAVDLQALYRSLGVYR TPQAAAPAPQADAESAGEGAAQALQAWSQDFVAGLGTPGGRGSNNWVLDGTRTASGRPLLANDPHLGLGAPALWYFAHLK APQGRASDGTPVAAIDVIGATLPGLPFVVLGRTAEVAWGFTNTAPDVQDLYIEAIHPDDPTRYRTPEGWQGFEQREHVIR VKGRPDVRHTVRSTRHGPVISDAQPALHGSVLDLRRHVIALRWSALDADNYTVLAGLLSNQARSVEELFAGMAHYHSPMQ SVVAADVHGAIRFQAFGRVPLRAAGNDLRGVAPAPGWEARYDWQGWLPLAQTPQDDGGARGWIATANQRITAPGYPHFLT QDWALPYRYQRIEQQLEARRLHDLPSLRALQGDTVSPAALRLLPHLLAAPVSQPLARQAQALLRGFDGDMRADRAAPLIL SVWADELTRALVVPRVGEERFAATYGRRDFRSGLEGMLERGDTWWCPPHGCAAHAGAALERTVQRLAARYGNQPERWTWG AAHPALSVHKPLGSVPVLSRWFNVGVPSGGDAYSVNVGQYNAAQPVEPFASRHAPSLRALYDLQDPERSLFIYQTGQSGL VFSPRYADMAQAWAGGGYRALQRQPRRYVHQLQLRP >Mature_835_residues GRLQRIGAGAVVALVAALLLAGSVAAVYALRSFPQLDGALRAAGLQHAVAVRRDEADVTHIEAQTPWDAWFAMGYVHAQE RTWQLEFNRRLMHGELSEILGPATLDTDKLMRTLDIMGAARRQYAALPAFAREALQAYSRGIQSFHAARTQALPPEFLLL GARPGGAQGVAWAPEDSVAWALMMALDLGGNWGNEFARLSLAATLPTERLWQLMPPYLGEAPATAVDLQALYRSLGVYRT PQAAAPAPQADAESAGEGAAQALQAWSQDFVAGLGTPGGRGSNNWVLDGTRTASGRPLLANDPHLGLGAPALWYFAHLKA PQGRASDGTPVAAIDVIGATLPGLPFVVLGRTAEVAWGFTNTAPDVQDLYIEAIHPDDPTRYRTPEGWQGFEQREHVIRV KGRPDVRHTVRSTRHGPVISDAQPALHGSVLDLRRHVIALRWSALDADNYTVLAGLLSNQARSVEELFAGMAHYHSPMQS VVAADVHGAIRFQAFGRVPLRAAGNDLRGVAPAPGWEARYDWQGWLPLAQTPQDDGGARGWIATANQRITAPGYPHFLTQ DWALPYRYQRIEQQLEARRLHDLPSLRALQGDTVSPAALRLLPHLLAAPVSQPLARQAQALLRGFDGDMRADRAAPLILS VWADELTRALVVPRVGEERFAATYGRRDFRSGLEGMLERGDTWWCPPHGCAAHAGAALERTVQRLAARYGNQPERWTWGA AHPALSVHKPLGSVPVLSRWFNVGVPSGGDAYSVNVGQYNAAQPVEPFASRHAPSLRALYDLQDPERSLFIYQTGQSGLV FSPRYADMAQAWAGGGYRALQRQPRRYVHQLQLRP
Specific function: Catalyzes the deacylation of acyl-homoserine lactone (AHL or acyl-HSL), releasing homoserine lactone (HSL) and the corresponding fatty acid. Possesses a specificity for the degradation of long-chain acyl-HSLs (side chains of seven or more carbons in lengt
COG id: COG2366
COG function: function code R; Protein related to penicillin acylase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S45 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014395 - InterPro: IPR002692 [H]
Pfam domain/function: PF01804 Penicil_amidase [H]
EC number: =3.5.1.97 [H]
Molecular weight: Translated: 91081; Mature: 90950
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLQRIGAGAVVALVAALLLAGSVAAVYALRSFPQLDGALRAAGLQHAVAVRRDEADVT CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCE HIEAQTPWDAWFAMGYVHAQERTWQLEFNRRLMHGELSEILGPATLDTDKLMRTLDIMGA EEECCCCHHHHHHHHEEECCCEEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH ARRQYAALPAFAREALQAYSRGIQSFHAARTQALPPEFLLLGARPGGAQGVAWAPEDSVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHH WALMMALDLGGNWGNEFARLSLAATLPTERLWQLMPPYLGEAPATAVDLQALYRSLGVYR HHHHHHHHCCCCCCCHHHHEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC TPQAAAPAPQADAESAGEGAAQALQAWSQDFVAGLGTPGGRGSNNWVLDGTRTASGRPLL CCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEE ANDPHLGLGAPALWYFAHLKAPQGRASDGTPVAAIDVIGATLPGLPFVVLGRTAEVAWGF CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHCCCCCCEEEECCCHHEEECC TNTAPDVQDLYIEAIHPDDPTRYRTPEGWQGFEQREHVIRVKGRPDVRHTVRSTRHGPVI CCCCCCHHHHEEEEECCCCCCCCCCCCCCCCHHHCCCEEEECCCCCHHHHHHHCCCCCCC SDAQPALHGSVLDLRRHVIALRWSALDADNYTVLAGLLSNQARSVEELFAGMAHYHSPMQ CCCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH SVVAADVHGAIRFQAFGRVPLRAAGNDLRGVAPAPGWEARYDWQGWLPLAQTPQDDGGAR HHHHHHHHHHEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GWIATANQRITAPGYPHFLTQDWALPYRYQRIEQQLEARRLHDLPSLRALQGDTVSPAAL CEEEECCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHH RLLPHLLAAPVSQPLARQAQALLRGFDGDMRADRAAPLILSVWADELTRALVVPRVGEER HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHH FAATYGRRDFRSGLEGMLERGDTWWCPPHGCAAHAGAALERTVQRLAARYGNQPERWTWG HHHHHCHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECC AAHPALSVHKPLGSVPVLSRWFNVGVPSGGDAYSVNVGQYNAAQPVEPFASRHAPSLRAL CCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCHHHH YDLQDPERSLFIYQTGQSGLVFSPRYADMAQAWAGGGYRALQRQPRRYVHQLQLRP HCCCCCCCEEEEEEECCCCCEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GRLQRIGAGAVVALVAALLLAGSVAAVYALRSFPQLDGALRAAGLQHAVAVRRDEADVT CCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCE HIEAQTPWDAWFAMGYVHAQERTWQLEFNRRLMHGELSEILGPATLDTDKLMRTLDIMGA EEECCCCHHHHHHHHEEECCCEEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH ARRQYAALPAFAREALQAYSRGIQSFHAARTQALPPEFLLLGARPGGAQGVAWAPEDSVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHH WALMMALDLGGNWGNEFARLSLAATLPTERLWQLMPPYLGEAPATAVDLQALYRSLGVYR HHHHHHHHCCCCCCCHHHHEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC TPQAAAPAPQADAESAGEGAAQALQAWSQDFVAGLGTPGGRGSNNWVLDGTRTASGRPLL CCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEE ANDPHLGLGAPALWYFAHLKAPQGRASDGTPVAAIDVIGATLPGLPFVVLGRTAEVAWGF CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHCCCCCCEEEECCCHHEEECC TNTAPDVQDLYIEAIHPDDPTRYRTPEGWQGFEQREHVIRVKGRPDVRHTVRSTRHGPVI CCCCCCHHHHEEEEECCCCCCCCCCCCCCCCHHHCCCEEEECCCCCHHHHHHHCCCCCCC SDAQPALHGSVLDLRRHVIALRWSALDADNYTVLAGLLSNQARSVEELFAGMAHYHSPMQ CCCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH SVVAADVHGAIRFQAFGRVPLRAAGNDLRGVAPAPGWEARYDWQGWLPLAQTPQDDGGAR HHHHHHHHHHEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GWIATANQRITAPGYPHFLTQDWALPYRYQRIEQQLEARRLHDLPSLRALQGDTVSPAAL CEEEECCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHH RLLPHLLAAPVSQPLARQAQALLRGFDGDMRADRAAPLILSVWADELTRALVVPRVGEER HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHH FAATYGRRDFRSGLEGMLERGDTWWCPPHGCAAHAGAALERTVQRLAARYGNQPERWTWG HHHHHCHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECC AAHPALSVHKPLGSVPVLSRWFNVGVPSGGDAYSVNVGQYNAAQPVEPFASRHAPSLRAL CCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCHHHH YDLQDPERSLFIYQTGQSGLVFSPRYADMAQAWAGGGYRALQRQPRRYVHQLQLRP HCCCCCCCEEEEEEECCCCCEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]