| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110782
Identifier: 222110782
GI number: 222110782
Start: 1677470
End: 1678831
Strand: Direct
Name: 222110782
Synonym: Dtpsy_1587
Alternate gene names: NA
Gene position: 1677470-1678831 (Clockwise)
Preceding gene: 222110781
Following gene: 222110785
Centisome position: 44.18
GC content: 71.51
Gene sequence:
>1362_bases ATGCGCTTGCCACCCTCGACTCTCACGCTGCCGTCGTCGCCGCAGCAGTCGCAGCCCTCGATGGCGCGGCGCTACGCCGC GGTGCGCGCGGCCACCGAGGCGCTGGCGCGCCCCCTCTCGGCCGAGGACTGCTGCGCGCAGTCGATGCCCGACGCCAGCC CCGTCAAATGGCACCTGGCGCACACGAGCTGGTTCTTCGAGACCTTCGTCCTGGAGGCGCACGAGAGCGGCTTCCGAGCA TTCGATCCGGCGTTCCGCGTGCTGTTCAACTCGTACTACCACGGCGTGGGGCGGCAGCACCCGCGCCCGCAGCGTGGGTT GATCACGCGGCCCGACCTGGCCACCGTGCGGGCCTACCGCGCCGGCGTGGATGCGCGCATGCAGCAGCTCCTGTCGCAGC CAGAAGTTCCGGGTGACGTGCTGGCGCTGGTGGAACTAGGCCTGCAGCATGAGCAGCAGCACCAGGAGCTGATCCTCACC GACGTCAAGCACCTGCTCTGGTGCAACCCGCTGTGGCCGGCCTACCAGGGCACAGCCGCGGCCGTGGTGGCGGAAGCCAT TGCGGCACAAGACACCGCGTGGCGGCGCCTGGAAGGCGGCCTGGCGCAGATCGGCCACGATGGCGAGGGCTTCGCCTTCG ACAACGAGACGCCGCGCCACACCGTCTTCCTGCAACCCTTCGAGATCGCCACTCGACCGGTGACCAACGCGCAGTACCTG GCTTTCGTGCAGGCCGGCGGCTACCGCGAGCCGGCCCACTGGTTGGCCGAGGGCTGGGACTGGCGGCGTGCGCAAGGGCT GGAGCACCCCATCTACTGGCGCGGTGATGGGGAGTGCGGCCAAGGCGGCGGGCCGGGCGGCTGGAGCGAATTCACGCTGA CGGGCGAGCGCCCGCTGCATCCTGCGCAACCGGTGGTGCACCTGTCCTACTACGAGGCCGATGCCTTTGCCCGCTGGGCC GGCGCGCGCCTGCCCACGGAAGCCGAGTGGGAGGTGGCCGCGGCGGCCTGTGCCGGGCCCGCGGGCTGCGTGGACCATCC CGCTGATGCCGATGTCTTGGACGACGGCGGCCGGCTGCATCCCCGCCCAGCGGCGCCGGCGGTCGGCGCCGATCCCTTCC AGCCGATGGGCGGCGAGGTCTGGGAATGGACGCAGTCGAGCTACGCCCCGTACCCCGGCTTCGCGCCCGCGCCCGGTGCC GTGGGCGAGTACAACGGCAAGTTCATGGTGAACCAGTACGTCCTGCGCGGCGGCTCCTGCGCCACGCCGCCCGGCCATGT GCGTGCTAGCTACCGCAACTTCTTTCCCGCCACGGCGCGCTGGCAGTTCACGGGCCTGCGGCTGGCACGCGATGCCCGCT GA
Upstream 100 bases:
>100_bases CTGCACGACGCGGGTTTCACGCGCACGCAGGCCTGGACGGACGATCGCGGCTGGTTCGCCATGGTGCATGCCCAGGCGTG ATGCCGCCAGGGGATACCAC
Downstream 100 bases:
>100_bases GCAGTGGGTATGCTCCTGAATCAGGAGCTACTAGCGCTTGCCAGGAAAGCGCTAGAGCCGAAAATCGCTTAAACCGCGTC CAGCGCCTGGTGCAGGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MRLPPSTLTLPSSPQQSQPSMARRYAAVRAATEALARPLSAEDCCAQSMPDASPVKWHLAHTSWFFETFVLEAHESGFRA FDPAFRVLFNSYYHGVGRQHPRPQRGLITRPDLATVRAYRAGVDARMQQLLSQPEVPGDVLALVELGLQHEQQHQELILT DVKHLLWCNPLWPAYQGTAAAVVAEAIAAQDTAWRRLEGGLAQIGHDGEGFAFDNETPRHTVFLQPFEIATRPVTNAQYL AFVQAGGYREPAHWLAEGWDWRRAQGLEHPIYWRGDGECGQGGGPGGWSEFTLTGERPLHPAQPVVHLSYYEADAFARWA GARLPTEAEWEVAAAACAGPAGCVDHPADADVLDDGGRLHPRPAAPAVGADPFQPMGGEVWEWTQSSYAPYPGFAPAPGA VGEYNGKFMVNQYVLRGGSCATPPGHVRASYRNFFPATARWQFTGLRLARDAR
Sequences:
>Translated_453_residues MRLPPSTLTLPSSPQQSQPSMARRYAAVRAATEALARPLSAEDCCAQSMPDASPVKWHLAHTSWFFETFVLEAHESGFRA FDPAFRVLFNSYYHGVGRQHPRPQRGLITRPDLATVRAYRAGVDARMQQLLSQPEVPGDVLALVELGLQHEQQHQELILT DVKHLLWCNPLWPAYQGTAAAVVAEAIAAQDTAWRRLEGGLAQIGHDGEGFAFDNETPRHTVFLQPFEIATRPVTNAQYL AFVQAGGYREPAHWLAEGWDWRRAQGLEHPIYWRGDGECGQGGGPGGWSEFTLTGERPLHPAQPVVHLSYYEADAFARWA GARLPTEAEWEVAAAACAGPAGCVDHPADADVLDDGGRLHPRPAAPAVGADPFQPMGGEVWEWTQSSYAPYPGFAPAPGA VGEYNGKFMVNQYVLRGGSCATPPGHVRASYRNFFPATARWQFTGLRLARDAR >Mature_453_residues MRLPPSTLTLPSSPQQSQPSMARRYAAVRAATEALARPLSAEDCCAQSMPDASPVKWHLAHTSWFFETFVLEAHESGFRA FDPAFRVLFNSYYHGVGRQHPRPQRGLITRPDLATVRAYRAGVDARMQQLLSQPEVPGDVLALVELGLQHEQQHQELILT DVKHLLWCNPLWPAYQGTAAAVVAEAIAAQDTAWRRLEGGLAQIGHDGEGFAFDNETPRHTVFLQPFEIATRPVTNAQYL AFVQAGGYREPAHWLAEGWDWRRAQGLEHPIYWRGDGECGQGGGPGGWSEFTLTGERPLHPAQPVVHLSYYEADAFARWA GARLPTEAEWEVAAAACAGPAGCVDHPADADVLDDGGRLHPRPAAPAVGADPFQPMGGEVWEWTQSSYAPYPGFAPAPGA VGEYNGKFMVNQYVLRGGSCATPPGHVRASYRNFFPATARWQFTGLRLARDAR
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49748; Mature: 49748
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLPPSTLTLPSSPQQSQPSMARRYAAVRAATEALARPLSAEDCCAQSMPDASPVKWHLA CCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEE HTSWFFETFVLEAHESGFRAFDPAFRVLFNSYYHGVGRQHPRPQRGLITRPDLATVRAYR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHH AGVDARMQQLLSQPEVPGDVLALVELGLQHEQQHQELILTDVKHLLWCNPLWPAYQGTAA HCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH AVVAEAIAAQDTAWRRLEGGLAQIGHDGEGFAFDNETPRHTVFLQPFEIATRPVTNAQYL HHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEECCCCCCEEEEECHHHHHCCCCCCCEEE AFVQAGGYREPAHWLAEGWDWRRAQGLEHPIYWRGDGECGQGGGPGGWSEFTLTGERPLH EEEECCCCCCHHHHHHCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCC PAQPVVHLSYYEADAFARWAGARLPTEAEWEVAAAACAGPAGCVDHPADADVLDDGGRLH CCCCEEEEEEECHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCC PRPAAPAVGADPFQPMGGEVWEWTQSSYAPYPGFAPAPGAVGEYNGKFMVNQYVLRGGSC CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCCCCC ATPPGHVRASYRNFFPATARWQFTGLRLARDAR CCCCHHHHHHHHHCCCCCCEEEEECEEHHCCCC >Mature Secondary Structure MRLPPSTLTLPSSPQQSQPSMARRYAAVRAATEALARPLSAEDCCAQSMPDASPVKWHLA CCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEE HTSWFFETFVLEAHESGFRAFDPAFRVLFNSYYHGVGRQHPRPQRGLITRPDLATVRAYR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHH AGVDARMQQLLSQPEVPGDVLALVELGLQHEQQHQELILTDVKHLLWCNPLWPAYQGTAA HCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH AVVAEAIAAQDTAWRRLEGGLAQIGHDGEGFAFDNETPRHTVFLQPFEIATRPVTNAQYL HHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEECCCCCCEEEEECHHHHHCCCCCCCEEE AFVQAGGYREPAHWLAEGWDWRRAQGLEHPIYWRGDGECGQGGGPGGWSEFTLTGERPLH EEEECCCCCCHHHHHHCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCC PAQPVVHLSYYEADAFARWAGARLPTEAEWEVAAAACAGPAGCVDHPADADVLDDGGRLH CCCCEEEEEEECHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCC PRPAAPAVGADPFQPMGGEVWEWTQSSYAPYPGFAPAPGAVGEYNGKFMVNQYVLRGGSC CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCCCCC ATPPGHVRASYRNFFPATARWQFTGLRLARDAR CCCCHHHHHHHHHCCCCCCEEEEECEEHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA