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The map label for this gene is ompW [C]

Identifier: 222110780

GI number: 222110780

Start: 1675564

End: 1676151

Strand: Direct

Name: ompW [C]

Synonym: Dtpsy_1585

Alternate gene names: 222110780

Gene position: 1675564-1676151 (Clockwise)

Preceding gene: 222110779

Following gene: 222110781

Centisome position: 44.13

GC content: 62.76

Gene sequence:

>588_bases
ATGAAAAAGAATCTTCTGGCCCTGGCCGTTCTGTGTGCGATGACCTCCGGCGCTGCCTTCGCGCAGCAGGTTGCGGAAGG
TTCCTGGCTGGTGCGTGCACGCGCGGTGCATCTGGACAGCGCCAACAACGGTGCCGCCGGCGACGCGGGCGTGAGCATCA
ACGACAAGTGGATTCCTGAAGTCGACGTCTCGTACTTCTTCACGCCCAACCTCGCTGCCGAACTGGTCCTGACCTACCCG
CAAAAGCACGACGTGCGCCTGAACGGCGACAAGATCGGCTCGCTCAAGCACCTGCCGCCCTCGCTGCTGCTGCAGTACCA
CTTCACGAACTTCGGCGCGTTCAAGCCGTACGTCGGCGCTGGTGTCAACTACACGCGCTTTTCCAGCGTGAAGCTGCCCG
CGGGCCTGGACGTGAAGCGCAACAGCTGGGGCGGTGCCCTGCAAGTGGGCTTCGACTATGCGCTGGACAAGAACTGGTCC
CTGAACGTGGACGTGAAGAAGGTGTACATCGACACCGACGTGCGCGGCGTGGGCACTTTCAAGGTCGACCCGGTGCTGTT
CGGCGTGGGCGTGGGCTACCGCTTCTAA

Upstream 100 bases:

>100_bases
CAGATTCTGGGTTTGATCTGCAGCAATATTGACCATATTACTCGTGGGCTTAATGCGCGTACGGGGGTCGTCCCCGGTCA
ACCCAACGTATCGAGTCAAC

Downstream 100 bases:

>100_bases
GCACGCAAGTTCCGTTCTTCATGGTGGGGTGGGCCGGCGCATGCGCCGGCCCTTTTTTTTATCCTCGGCGGACGGTAAAT
CGATGCTCTCATTGAAGGAG

Product: ompw family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKKNLLALAVLCAMTSGAAFAQQVAEGSWLVRARAVHLDSANNGAAGDAGVSINDKWIPEVDVSYFFTPNLAAELVLTYP
QKHDVRLNGDKIGSLKHLPPSLLLQYHFTNFGAFKPYVGAGVNYTRFSSVKLPAGLDVKRNSWGGALQVGFDYALDKNWS
LNVDVKKVYIDTDVRGVGTFKVDPVLFGVGVGYRF

Sequences:

>Translated_195_residues
MKKNLLALAVLCAMTSGAAFAQQVAEGSWLVRARAVHLDSANNGAAGDAGVSINDKWIPEVDVSYFFTPNLAAELVLTYP
QKHDVRLNGDKIGSLKHLPPSLLLQYHFTNFGAFKPYVGAGVNYTRFSSVKLPAGLDVKRNSWGGALQVGFDYALDKNWS
LNVDVKKVYIDTDVRGVGTFKVDPVLFGVGVGYRF
>Mature_195_residues
MKKNLLALAVLCAMTSGAAFAQQVAEGSWLVRARAVHLDSANNGAAGDAGVSINDKWIPEVDVSYFFTPNLAAELVLTYP
QKHDVRLNGDKIGSLKHLPPSLLLQYHFTNFGAFKPYVGAGVNYTRFSSVKLPAGLDVKRNSWGGALQVGFDYALDKNWS
LNVDVKKVYIDTDVRGVGTFKVDPVLFGVGVGYRF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=216, Percent_Identity=33.3333333333333, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 21197; Mature: 21197

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS00695 ENT_VIR_OMP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNLLALAVLCAMTSGAAFAQQVAEGSWLVRARAVHLDSANNGAAGDAGVSINDKWIPE
CCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCEECCCCCCC
VDVSYFFTPNLAAELVLTYPQKHDVRLNGDKIGSLKHLPPSLLLQYHFTNFGAFKPYVGA
CCEEEEECCCCCEEEEEECCCCCCEEECCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCC
GVNYTRFSSVKLPAGLDVKRNSWGGALQVGFDYALDKNWSLNVDVKKVYIDTDVRGVGTF
CCCEEEECCEECCCCCCEEECCCCCEEEEEEEEEECCCCEEEEEEEEEEEECCCCEEEEE
KVDPVLFGVGVGYRF
EECCEEEEECCCCCC
>Mature Secondary Structure
MKKNLLALAVLCAMTSGAAFAQQVAEGSWLVRARAVHLDSANNGAAGDAGVSINDKWIPE
CCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCEECCCCCCC
VDVSYFFTPNLAAELVLTYPQKHDVRLNGDKIGSLKHLPPSLLLQYHFTNFGAFKPYVGA
CCEEEEECCCCCEEEEEECCCCCCEEECCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCC
GVNYTRFSSVKLPAGLDVKRNSWGGALQVGFDYALDKNWSLNVDVKKVYIDTDVRGVGTF
CCCEEEECCEECCCCCCEEECCCCCEEEEEEEEEECCCCEEEEEEEEEEEECCCCEEEEE
KVDPVLFGVGVGYRF
EECCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]