| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is yedI [H]
Identifier: 222110779
GI number: 222110779
Start: 1674412
End: 1675410
Strand: Direct
Name: yedI [H]
Synonym: Dtpsy_1584
Alternate gene names: 222110779
Gene position: 1674412-1675410 (Clockwise)
Preceding gene: 222110777
Following gene: 222110780
Centisome position: 44.1
GC content: 68.47
Gene sequence:
>999_bases ATGGCCGGCGCCAGCCTTCTGACCCTGCTTGACGACATCGCCACCATCCTGGACGACGTGGCCCTCATGACCAAGGTGGC CGCCAAGAAAAGCGCCGCCATGGCCGACGACGTGTCCGTCATGACCAAAGTGGCGGCGCAAAAGACCGCAGGGGTGCTGG GCGACGACCTGGCGCTCAATGCCCAGCAGGTCACTGGCGTGCGGGCAGAGCGCGAGATCCCCGTCGTGTGGGGCGTCGCC CGCGGGTCCCTGGTGAACAAGGCCATCCTCGTGCCGGCGGCGCTGCTCATCAGCGCGTTCGCGCCGTGGGCCGTGACGCC GCTGCTCATGGTGGGCGGGGCCTTCCTGTGCTTCGAAGGCTGCGAAAAGCTCGCGCACAAGCTTTTACACACGCCCGAGG AAGATGCCGTGCAACACGCGATCCATGCGCAGGCCAACGCCAATCCCAATGTGGACCTGGCGCGGGTGGAGAAGGACAAG ATCAAGGCGGCCGTGCGTACCGACTTCATCCTCTCTGCTGAAATCATCGCCATCACCCTGGGCGCCGTCGCGGGCGCGCC TTTTGCGCAGCAAGTGGCGGTACTGGCGGGCATTGCCGTCCTGATGACGGTGGGGGTCTATGGCCTCGTGGCGGGCATCG TGAAGCTGGACGACCTGGGCCTGTGGCTCTGCCGCCAGGCCAGCAACGCGGCACAGGCCCTGGGCCGCGGCATCGTCGCG GCCGCACCCTGGCTCATGAAGACGCTGTCGGTGGTCGGCACCGCAGCCATGTTCCTCGTCGGCGGGGGCATCCTGGTGCA TGGCGTGCCGGCGCTGCACCATGCCGTCGAGGGCGTGGGCGCGGCGGTGCAGGGTTGGCCGCTGGGCGGACTGTGGTCGG TGCTGGTGACCAACCTGCTCAATGCCGTGGTGGGCTTGGTGGCGGGCGCCGTGGTGCTGGCGGGGTGGACGCTGGTGGGA CGGCTGCGCGGCAAGGCGGCTGCCAATGGCACGCATTGA
Upstream 100 bases:
>100_bases CCTGCCCGCCTATTACAAAAACAATAGCTGTCAGCGCTTGTCCCACATGCGTTAGGGGTGTTTTCATTCAGAATGGCGGC TTCTTGAAAGGAACTCACCC
Downstream 100 bases:
>100_bases GTGAGGCCATATGCCGCCGTTTGTGACGGAATAGACACATACGAATAGACACACAGATTCTGGGTTTGATCTGCAGCAAT ATTGACCATATTACTCGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MAGASLLTLLDDIATILDDVALMTKVAAKKSAAMADDVSVMTKVAAQKTAGVLGDDLALNAQQVTGVRAEREIPVVWGVA RGSLVNKAILVPAALLISAFAPWAVTPLLMVGGAFLCFEGCEKLAHKLLHTPEEDAVQHAIHAQANANPNVDLARVEKDK IKAAVRTDFILSAEIIAITLGAVAGAPFAQQVAVLAGIAVLMTVGVYGLVAGIVKLDDLGLWLCRQASNAAQALGRGIVA AAPWLMKTLSVVGTAAMFLVGGGILVHGVPALHHAVEGVGAAVQGWPLGGLWSVLVTNLLNAVVGLVAGAVVLAGWTLVG RLRGKAAANGTH
Sequences:
>Translated_332_residues MAGASLLTLLDDIATILDDVALMTKVAAKKSAAMADDVSVMTKVAAQKTAGVLGDDLALNAQQVTGVRAEREIPVVWGVA RGSLVNKAILVPAALLISAFAPWAVTPLLMVGGAFLCFEGCEKLAHKLLHTPEEDAVQHAIHAQANANPNVDLARVEKDK IKAAVRTDFILSAEIIAITLGAVAGAPFAQQVAVLAGIAVLMTVGVYGLVAGIVKLDDLGLWLCRQASNAAQALGRGIVA AAPWLMKTLSVVGTAAMFLVGGGILVHGVPALHHAVEGVGAAVQGWPLGGLWSVLVTNLLNAVVGLVAGAVVLAGWTLVG RLRGKAAANGTH >Mature_331_residues AGASLLTLLDDIATILDDVALMTKVAAKKSAAMADDVSVMTKVAAQKTAGVLGDDLALNAQQVTGVRAEREIPVVWGVAR GSLVNKAILVPAALLISAFAPWAVTPLLMVGGAFLCFEGCEKLAHKLLHTPEEDAVQHAIHAQANANPNVDLARVEKDKI KAAVRTDFILSAEIIAITLGAVAGAPFAQQVAVLAGIAVLMTVGVYGLVAGIVKLDDLGLWLCRQASNAAQALGRGIVAA APWLMKTLSVVGTAAMFLVGGGILVHGVPALHHAVEGVGAAVQGWPLGGLWSVLVTNLLNAVVGLVAGAVVLAGWTLVGR LRGKAAANGTH
Specific function: Unknown
COG id: COG2354
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788268, Length=332, Percent_Identity=56.6265060240964, Blast_Score=346, Evalue=1e-96,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008526 [H]
Pfam domain/function: PF05661 DUF808 [H]
EC number: NA
Molecular weight: Translated: 33863; Mature: 33732
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGASLLTLLDDIATILDDVALMTKVAAKKSAAMADDVSVMTKVAAQKTAGVLGDDLALN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCC AQQVTGVRAEREIPVVWGVARGSLVNKAILVPAALLISAFAPWAVTPLLMVGGAFLCFEG HHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH CEKLAHKLLHTPEEDAVQHAIHAQANANPNVDLARVEKDKIKAAVRTDFILSAEIIAITL HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAVAGAPFAQQVAVLAGIAVLMTVGVYGLVAGIVKLDDLGLWLCRQASNAAQALGRGIVA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH AAPWLMKTLSVVGTAAMFLVGGGILVHGVPALHHAVEGVGAAVQGWPLGGLWSVLVTNLL HHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHH NAVVGLVAGAVVLAGWTLVGRLRGKAAANGTH HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AGASLLTLLDDIATILDDVALMTKVAAKKSAAMADDVSVMTKVAAQKTAGVLGDDLALN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCC AQQVTGVRAEREIPVVWGVARGSLVNKAILVPAALLISAFAPWAVTPLLMVGGAFLCFEG HHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH CEKLAHKLLHTPEEDAVQHAIHAQANANPNVDLARVEKDKIKAAVRTDFILSAEIIAITL HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAVAGAPFAQQVAVLAGIAVLMTVGVYGLVAGIVKLDDLGLWLCRQASNAAQALGRGIVA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH AAPWLMKTLSVVGTAAMFLVGGGILVHGVPALHHAVEGVGAAVQGWPLGGLWSVLVTNLL HHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHH NAVVGLVAGAVVLAGWTLVGRLRGKAAANGTH HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 2527357; 7567469 [H]