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The map label for this gene is dedA [H]

Identifier: 222110665

GI number: 222110665

Start: 1540575

End: 1541216

Strand: Direct

Name: dedA [H]

Synonym: Dtpsy_1467

Alternate gene names: 222110665

Gene position: 1540575-1541216 (Clockwise)

Preceding gene: 222110661

Following gene: 222110667

Centisome position: 40.58

GC content: 63.24

Gene sequence:

>642_bases
ATGGAACTCGTCAGCTTTCTCATCGACTTCATCCTGCACGTGGACAAGTACCTCGAGGCCTTCGTCGCCAACTACGGCGC
CTGGGTGTACGCGCTGCTGTTCCTCATCGTCTTCGTGGAGACGGGCGTGGTGGTCATGCCCTTCCTGCCGGGCGACTCGC
TGCTGTTCATCGTCGGCGCGCTCAGCGGCGCGGGGCTGCTGAACTTCCCGCTGGCCTGCGCCATCTTGCTGGTGGCGGCC
ATTCTGGGCGATCAGTGCAACTACACCATTGGGCGCTATTTCGGGCCGAAGGTGTTCCAGTGGGAGGATTCGCGCTGGTT
CAACAAGCGGGCGTTTGACCAGGCGCATGGGTTCTACGAGCGCTATGGCGGTATCACCATCGTGCTGGCGCGCTTCATGC
CGTTCATTCGCACCTTTGCCCCCTTTGTGGCGGGTGTGGCGGCCATGGGGCGGGGCAAATTCTCGGCCTATAACGTGGGC
GGTGCGCTGGTGTGGGTGCTGGGCATCTGCACGGCGGGCTATTTCTTCGGCAACCTGCCCTGGGTGCGCCAGCACCTGGA
GAAGATCATCTGGGGCCTGATTCTGGTGCCGGGGCTGATCGCCATCTTCGGCGCCTGGCGCGCCGGACGTAAAACGGCGT
AA

Upstream 100 bases:

>100_bases
GCGCGGCGGTAGCAGGGAGGGGGGAGCTTGCATTCACCCGGGGAATTCTAGGAGCTGCGGATAATGCGCGCTTTGCCCTT
GGGCGCACCCCGCTTTTTTC

Downstream 100 bases:

>100_bases
CCATTTCGCCCCGCCAGAAACAATATCGCCCGCGCGTGGCGGGCGAAAAACAGGGGCACCGCGGGTGTTAGCGGCGCTTG
GATTTGGTCAATTCGTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MELVSFLIDFILHVDKYLEAFVANYGAWVYALLFLIVFVETGVVVMPFLPGDSLLFIVGALSGAGLLNFPLACAILLVAA
ILGDQCNYTIGRYFGPKVFQWEDSRWFNKRAFDQAHGFYERYGGITIVLARFMPFIRTFAPFVAGVAAMGRGKFSAYNVG
GALVWVLGICTAGYFFGNLPWVRQHLEKIIWGLILVPGLIAIFGAWRAGRKTA

Sequences:

>Translated_213_residues
MELVSFLIDFILHVDKYLEAFVANYGAWVYALLFLIVFVETGVVVMPFLPGDSLLFIVGALSGAGLLNFPLACAILLVAA
ILGDQCNYTIGRYFGPKVFQWEDSRWFNKRAFDQAHGFYERYGGITIVLARFMPFIRTFAPFVAGVAAMGRGKFSAYNVG
GALVWVLGICTAGYFFGNLPWVRQHLEKIIWGLILVPGLIAIFGAWRAGRKTA
>Mature_213_residues
MELVSFLIDFILHVDKYLEAFVANYGAWVYALLFLIVFVETGVVVMPFLPGDSLLFIVGALSGAGLLNFPLACAILLVAA
ILGDQCNYTIGRYFGPKVFQWEDSRWFNKRAFDQAHGFYERYGGITIVLARFMPFIRTFAPFVAGVAAMGRGKFSAYNVG
GALVWVLGICTAGYFFGNLPWVRQHLEKIIWGLILVPGLIAIFGAWRAGRKTA

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=207, Percent_Identity=55.5555555555556, Blast_Score=227, Evalue=4e-61,
Organism=Escherichia coli, GI1789481, Length=182, Percent_Identity=33.5164835164835, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1789384, Length=171, Percent_Identity=32.1637426900585, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1786252, Length=152, Percent_Identity=27.6315789473684, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI87082056, Length=152, Percent_Identity=28.9473684210526, Blast_Score=60, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23636; Mature: 23636

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELVSFLIDFILHVDKYLEAFVANYGAWVYALLFLIVFVETGVVVMPFLPGDSLLFIVGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHH
LSGAGLLNFPLACAILLVAAILGDQCNYTIGRYFGPKVFQWEDSRWFNKRAFDQAHGFYE
HCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEECCCHHHHHHHHHHHHHHHH
RYGGITIVLARFMPFIRTFAPFVAGVAAMGRGKFSAYNVGGALVWVLGICTAGYFFGNLP
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCH
WVRQHLEKIIWGLILVPGLIAIFGAWRAGRKTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MELVSFLIDFILHVDKYLEAFVANYGAWVYALLFLIVFVETGVVVMPFLPGDSLLFIVGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHH
LSGAGLLNFPLACAILLVAAILGDQCNYTIGRYFGPKVFQWEDSRWFNKRAFDQAHGFYE
HCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEECCCHHHHHHHHHHHHHHHH
RYGGITIVLARFMPFIRTFAPFVAGVAAMGRGKFSAYNVGGALVWVLGICTAGYFFGNLP
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCH
WVRQHLEKIIWGLILVPGLIAIFGAWRAGRKTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]