| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
Click here to switch to the map view.
The map label for this gene is 222110661
Identifier: 222110661
GI number: 222110661
Start: 1535146
End: 1536453
Strand: Direct
Name: 222110661
Synonym: Dtpsy_1463
Alternate gene names: NA
Gene position: 1535146-1536453 (Clockwise)
Preceding gene: 222110660
Following gene: 222110665
Centisome position: 40.44
GC content: 73.78
Gene sequence:
>1308_bases ATGAGACGCGCCACTGTCCGTTGCCTCACGGTGCTGGCCTGCGCCGTTTCGTTGGCCTGCGGCGCGCGCGCCCAGGAGAT GCCCAGGGCGGTACTGCCGCCGCCCGCCACCGTGCAGGAAGTCCTTGTGCAACTGCCCCAGGTGCGCGCTGCCGGTGCCG GCCTGGCACTGGCGCAAGCGCGTGGCGAACGCCTGCGCGCGGGCCCGCACGACTGGGTAGCCAAGGCAGGTGCCAACCAG CGCCGTGAGCAGGGCGGCACGCGCTACGCGGAAACCGAGCTGGGCCTGGAAACAGGCATGCGCTGGCCCGGCAAGGTGGC GGCCGACCACCAACTGGGCGCGGCCGTTGAACAGGTGGCCGTGCTTGCCCAGGCCGACGCCTGGCATGAGGCCGCGCGCA CCCTGCTGGCGGACTGGTTCGAGGCCCTGCGCGCCGCGCGCACGGACCAACTGCTGCAGGCCCAGGAGGCGCTGATGGCG CGCACCCTGGCCGCCACGCAGCGCCGGGTGGATCTGGGCGAGGCCGCCACGCTCGAATTGCTCGCCACCCAGGCAGAGCA TGCCCGCGTGAAGGCCCAGGCTGCGCGCGCCGCTGCCCAGGCCATGCTCGTGCGCCAGAGCCTGCTGCGCCGCTACCCGG GCTTGCCGGACCCGGCCAGCCTGCTGCCGCCAGCCGATGCCCCCTGGCCTGCCGAGGTGCCAGAGGGTGGTACAGACGGC CAGGACCCTGCCGCCGCCTGGGTTGCGCGCATTCTTGAGGACAACCACGAACTGGAGCTGGCCGAGGCGCAGGCCGGGCA AACACGCCTGCAAGCCGAGCGCATGCAGCTGGAGCGGACCCCCGACCCCACGGTGGGCGTGCGCGCCACGCGCGAGCGCG GTGGGCAAGAGCATGTGCTGGGGGTCTACGTCTCCCTGCCCCTGGGAAGTGCAGGGCGCCGTGCCGACGCGCAGGCTGCC TTGGCGCAGGCCGACGTGGCGCAGCAGGAGCTGGCGCGCACACGCCAGCGCGTCGAGGCCGAGGCGTGGCGCGTGGTTGG CGAAGCGGCACAGGCGCGCGCCACGCTGGCCCAGCAGCGCCAGGCCCTGGCCTACAGTGAGAAAAGCGCGGCGCTGCAGG CGCGCGCCTACGCACTGGGGGAGAGTGGCTTGGGCGACTGGTTGCTGGCCCAGCGCGGTGCCCTCGATGCCCGCCTGGCG GCGGAGACGGCTGCCCTGGAGGCCCAGCAGGCGCAAGCTCGGGTGCTGCTGGATGCGCACCGCATATGGACGCCCCCGGG CCACGGCACACCGCATGCCGAGCACTGA
Upstream 100 bases:
>100_bases TGGAGCCACTCATTGATGCACTGCGCAAGGCCCTGCCAACCCCGCAGATTGCCTACTGGGCCGCCCCCTTGCTGGCCTTT GGCCGCCTTGGGAGCCTGCC
Downstream 100 bases:
>100_bases TATTTGCTATTGAAAGGAGAGCTGCTAGCGCTTATTGGATAAGCGCTAGCAGCCTAAAAGGCGTCAAATGCCAGGCGCGG TGGGCTGGTCCGCTGCGCGC
Product: outer membrane efflux protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MRRATVRCLTVLACAVSLACGARAQEMPRAVLPPPATVQEVLVQLPQVRAAGAGLALAQARGERLRAGPHDWVAKAGANQ RREQGGTRYAETELGLETGMRWPGKVAADHQLGAAVEQVAVLAQADAWHEAARTLLADWFEALRAARTDQLLQAQEALMA RTLAATQRRVDLGEAATLELLATQAEHARVKAQAARAAAQAMLVRQSLLRRYPGLPDPASLLPPADAPWPAEVPEGGTDG QDPAAAWVARILEDNHELELAEAQAGQTRLQAERMQLERTPDPTVGVRATRERGGQEHVLGVYVSLPLGSAGRRADAQAA LAQADVAQQELARTRQRVEAEAWRVVGEAAQARATLAQQRQALAYSEKSAALQARAYALGESGLGDWLLAQRGALDARLA AETAALEAQQAQARVLLDAHRIWTPPGHGTPHAEH
Sequences:
>Translated_435_residues MRRATVRCLTVLACAVSLACGARAQEMPRAVLPPPATVQEVLVQLPQVRAAGAGLALAQARGERLRAGPHDWVAKAGANQ RREQGGTRYAETELGLETGMRWPGKVAADHQLGAAVEQVAVLAQADAWHEAARTLLADWFEALRAARTDQLLQAQEALMA RTLAATQRRVDLGEAATLELLATQAEHARVKAQAARAAAQAMLVRQSLLRRYPGLPDPASLLPPADAPWPAEVPEGGTDG QDPAAAWVARILEDNHELELAEAQAGQTRLQAERMQLERTPDPTVGVRATRERGGQEHVLGVYVSLPLGSAGRRADAQAA LAQADVAQQELARTRQRVEAEAWRVVGEAAQARATLAQQRQALAYSEKSAALQARAYALGESGLGDWLLAQRGALDARLA AETAALEAQQAQARVLLDAHRIWTPPGHGTPHAEH >Mature_435_residues MRRATVRCLTVLACAVSLACGARAQEMPRAVLPPPATVQEVLVQLPQVRAAGAGLALAQARGERLRAGPHDWVAKAGANQ RREQGGTRYAETELGLETGMRWPGKVAADHQLGAAVEQVAVLAQADAWHEAARTLLADWFEALRAARTDQLLQAQEALMA RTLAATQRRVDLGEAATLELLATQAEHARVKAQAARAAAQAMLVRQSLLRRYPGLPDPASLLPPADAPWPAEVPEGGTDG QDPAAAWVARILEDNHELELAEAQAGQTRLQAERMQLERTPDPTVGVRATRERGGQEHVLGVYVSLPLGSAGRRADAQAA LAQADVAQQELARTRQRVEAEAWRVVGEAAQARATLAQQRQALAYSEKSAALQARAYALGESGLGDWLLAQRGALDARLA AETAALEAQQAQARVLLDAHRIWTPPGHGTPHAEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46503; Mature: 46503
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRATVRCLTVLACAVSLACGARAQEMPRAVLPPPATVQEVLVQLPQVRAAGAGLALAQA CCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH RGERLRAGPHDWVAKAGANQRREQGGTRYAETELGLETGMRWPGKVAADHQLGAAVEQVA CCHHHCCCCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH VLAQADAWHEAARTLLADWFEALRAARTDQLLQAQEALMARTLAATQRRVDLGEAATLEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LATQAEHARVKAQAARAAAQAMLVRQSLLRRYPGLPDPASLLPPADAPWPAEVPEGGTDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCC QDPAAAWVARILEDNHELELAEAQAGQTRLQAERMQLERTPDPTVGVRATRERGGQEHVL CCHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEHHHCCCCCCEE GVYVSLPLGSAGRRADAQAALAQADVAQQELARTRQRVEAEAWRVVGEAAQARATLAQQR EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QALAYSEKSAALQARAYALGESGLGDWLLAQRGALDARLAAETAALEAQQAQARVLLDAH HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RIWTPPGHGTPHAEH HHCCCCCCCCCCCCC >Mature Secondary Structure MRRATVRCLTVLACAVSLACGARAQEMPRAVLPPPATVQEVLVQLPQVRAAGAGLALAQA CCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH RGERLRAGPHDWVAKAGANQRREQGGTRYAETELGLETGMRWPGKVAADHQLGAAVEQVA CCHHHCCCCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH VLAQADAWHEAARTLLADWFEALRAARTDQLLQAQEALMARTLAATQRRVDLGEAATLEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LATQAEHARVKAQAARAAAQAMLVRQSLLRRYPGLPDPASLLPPADAPWPAEVPEGGTDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCC QDPAAAWVARILEDNHELELAEAQAGQTRLQAERMQLERTPDPTVGVRATRERGGQEHVL CCHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEHHHCCCCCCEE GVYVSLPLGSAGRRADAQAALAQADVAQQELARTRQRVEAEAWRVVGEAAQARATLAQQR EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QALAYSEKSAALQARAYALGESGLGDWLLAQRGALDARLAAETAALEAQQAQARVLLDAH HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RIWTPPGHGTPHAEH HHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA