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The map label for this gene is ycgE [C]

Identifier: 222110653

GI number: 222110653

Start: 1522955

End: 1523383

Strand: Direct

Name: ycgE [C]

Synonym: Dtpsy_1455

Alternate gene names: 222110653

Gene position: 1522955-1523383 (Clockwise)

Preceding gene: 222110652

Following gene: 222110654

Centisome position: 40.11

GC content: 61.07

Gene sequence:

>429_bases
ATGAGCACCTTGCTGCCACCCATTCCGGCCAAACGCTATTTCACGATTGGTGAAGTGGCGGAGCTCTGTGGCGTCAAACC
CCATGTCCTGCGCTACTGGGAACAGGAATTCACGCAGTTGCGCCCCATGAAGCGGCGCGGCAACCGGCGCTATTACCAGC
ACCATGAGGTGCTGATGATCCGCCGCATTCGCGACCTGCTGTATGACCAAGGCTTCACCATCAGCGGTGCGCGCAACCGG
CTGCAGGAGCTGGCCCATGCGGACAAGGCCCTGCGCGATGGTGGTGCGCCGCATGCGGACGGCCTGGAAGCGGCTGTACC
TGCGCAGGGTGCGAATGAGGGGATGAGCGTCGCGCAGGCGATTCCTTTGAACGCGGCGACCCTGCGAAAAGAATTGGAAG
AAATTCGCGCACTTCTTCTTACGGTCTGA

Upstream 100 bases:

>100_bases
AGTAGTTGACCCGAACCGGTGTTTTTGGCCCAGAGATCCTGGCCGCCGGTAAGGGGCTGCAGTACGCTCCACAGTCTTGC
CCGTTTTTTGCGCCATTCCC

Downstream 100 bases:

>100_bases
TTTTTCGGTATAGAATTCAAGTCTTGTCGGCGTGTAGCGCAGCCTGGTAGCGCACTTGCATGGGGTGCAAGGGGTCGCGA
GTTCGAATCCCGCCACGCCG

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Transcription Regulator Protein; Regulatory Protein MerR; Transcriptional Regulator Merr Family; MerR-Family Transcriptional Regulator; Trancriptional Regulator MerR Family; Transcriptional Regulator Protein; MerR Family Regulatory Protein; Transcriptional Regulator MerR; TRANSCRIPTIONal REGULATOR MerR Family; Regulatory Protein Merr; MerR Family Regulatory Family; Transcriptional Regulator Protein MerR Family; Bacterial Transferase Hexapeptide Repeat Protein; Transcriptional Regulator Domain-Containing Protein; MerR Protein

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSTLLPPIPAKRYFTIGEVAELCGVKPHVLRYWEQEFTQLRPMKRRGNRRYYQHHEVLMIRRIRDLLYDQGFTISGARNR
LQELAHADKALRDGGAPHADGLEAAVPAQGANEGMSVAQAIPLNAATLRKELEEIRALLLTV

Sequences:

>Translated_142_residues
MSTLLPPIPAKRYFTIGEVAELCGVKPHVLRYWEQEFTQLRPMKRRGNRRYYQHHEVLMIRRIRDLLYDQGFTISGARNR
LQELAHADKALRDGGAPHADGLEAAVPAQGANEGMSVAQAIPLNAATLRKELEEIRALLLTV
>Mature_141_residues
STLLPPIPAKRYFTIGEVAELCGVKPHVLRYWEQEFTQLRPMKRRGNRRYYQHHEVLMIRRIRDLLYDQGFTISGARNRL
QELAHADKALRDGGAPHADGLEAAVPAQGANEGMSVAQAIPLNAATLRKELEEIRALLLTV

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16055; Mature: 15924

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLLPPIPAKRYFTIGEVAELCGVKPHVLRYWEQEFTQLRPMKRRGNRRYYQHHEVLMI
CCCCCCCCCCCHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RRIRDLLYDQGFTISGARNRLQELAHADKALRDGGAPHADGLEAAVPAQGANEGMSVAQA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
IPLNAATLRKELEEIRALLLTV
CCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STLLPPIPAKRYFTIGEVAELCGVKPHVLRYWEQEFTQLRPMKRRGNRRYYQHHEVLMI
CCCCCCCCCCHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RRIRDLLYDQGFTISGARNRLQELAHADKALRDGGAPHADGLEAAVPAQGANEGMSVAQA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
IPLNAATLRKELEEIRALLLTV
CCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA