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The map label for this gene is rbgA [H]

Identifier: 222110550

GI number: 222110550

Start: 1413606

End: 1414565

Strand: Direct

Name: rbgA [H]

Synonym: Dtpsy_1350

Alternate gene names: 222110550

Gene position: 1413606-1414565 (Clockwise)

Preceding gene: 222110547

Following gene: 222110558

Centisome position: 37.23

GC content: 68.75

Gene sequence:

>960_bases
ATGGCCATCCAGTGGTTTCCCGGTCACATGCACCTGACGCGCAAAGCGATCGGCGAGCGCATCAAGGACATCGACGTGGT
GATCGAGCTGCTGGACGCGCGCTTGCCGGGCTCCAGCAGCAATCCGCTGCTGGCCGAGCTGACGGGCCATAAGCCTGCGC
TGAAGGTGCTCAACAAGCAGGACGTGGCCGACCCGACGCGCACGCCCGCGTGGCTGGCCTGGTACAACGCGCGGCCCGGC
ACGAGCGCGATTGCGCTGGATGCGTCCGACGCCGCGCCCGCGCGTCGGCTCATCGACGCGTGCCGGCAGCTTGCGCCCAA
CCGGCGCGGCCTCTCCAAGCCCATGCGGGTACTGATCTGCGGCATTCCCAATGTGGGCAAGTCCACGCTGATCAACACCC
TGTCCGCCAAGCGCGAAGCCAAGACGGGCGACGAGGCCGGCGTGACCAAGCAGGAGCAACGCATCGTGCTGGACGATGAC
TTTTACCTGTGGGACACGCCTGGCATGCTGTGGCCGCGCATCACCGTGCCCGAAAGCGGCTACAAGCTCGCCGCCAGCGG
CGCCGTGGGCCGCAATGCGTACGACGAGGAAGAAGTGGCGCTGGAACTGTTGGCCTACCTCAAGCAGCACTACGCACCGC
TGCTGGACGCGCGCTACAAGCTGGGGCTGGACGCGGCGGCCATCGCCGCCAAGCACGATGATGAGCTGCTGGAGCTGATT
GCCAGGAAGCGCGGCGCGGTGATGAGCGGCGGGCGCCTCAACCTGCAAAAGGCCGCCGAGATCGTGCTCACCGACCTGCG
CAGCGCAGCGCTGGGCCGTGTGACGCTGGAGACGCCGGCCGAGTTCGAGGCCTGGCTGGCCGCCGCCGAGGTGCAGGAAA
AGGAACGCGCCGCGCGCAAGGCCGAGCAGCTGCGCCGCAACGAGCGCCGCGCGCGCAACGCCCCGCGGGACGAGGACTGA

Upstream 100 bases:

>100_bases
GAGCAGCAGCTCGGAATCTTGTTTGCGCTGGGAGAAAGAGGGCATGGCGGCGATTATCCTTGGCGGCTTCGCAGCCCCCA
TTCGTGAAAGTACACAGTCC

Downstream 100 bases:

>100_bases
TCAGGGCCAGGTTCGCTCGCAGGATCTGCGCAGTTCACAGGCCCTAGGCCAGCACCGGATCGCAGCGCACCTCGGTGGTG
ACCGAGTTGGCGATGAAGCA

Product: hsr1-like GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MAIQWFPGHMHLTRKAIGERIKDIDVVIELLDARLPGSSSNPLLAELTGHKPALKVLNKQDVADPTRTPAWLAWYNARPG
TSAIALDASDAAPARRLIDACRQLAPNRRGLSKPMRVLICGIPNVGKSTLINTLSAKREAKTGDEAGVTKQEQRIVLDDD
FYLWDTPGMLWPRITVPESGYKLAASGAVGRNAYDEEEVALELLAYLKQHYAPLLDARYKLGLDAAAIAAKHDDELLELI
ARKRGAVMSGGRLNLQKAAEIVLTDLRSAALGRVTLETPAEFEAWLAAAEVQEKERAARKAEQLRRNERRARNAPRDED

Sequences:

>Translated_319_residues
MAIQWFPGHMHLTRKAIGERIKDIDVVIELLDARLPGSSSNPLLAELTGHKPALKVLNKQDVADPTRTPAWLAWYNARPG
TSAIALDASDAAPARRLIDACRQLAPNRRGLSKPMRVLICGIPNVGKSTLINTLSAKREAKTGDEAGVTKQEQRIVLDDD
FYLWDTPGMLWPRITVPESGYKLAASGAVGRNAYDEEEVALELLAYLKQHYAPLLDARYKLGLDAAAIAAKHDDELLELI
ARKRGAVMSGGRLNLQKAAEIVLTDLRSAALGRVTLETPAEFEAWLAAAEVQEKERAARKAEQLRRNERRARNAPRDED
>Mature_318_residues
AIQWFPGHMHLTRKAIGERIKDIDVVIELLDARLPGSSSNPLLAELTGHKPALKVLNKQDVADPTRTPAWLAWYNARPGT
SAIALDASDAAPARRLIDACRQLAPNRRGLSKPMRVLICGIPNVGKSTLINTLSAKREAKTGDEAGVTKQEQRIVLDDDF
YLWDTPGMLWPRITVPESGYKLAASGAVGRNAYDEEEVALELLAYLKQHYAPLLDARYKLGLDAAAIAAKHDDELLELIA
RKRGAVMSGGRLNLQKAAEIVLTDLRSAALGRVTLETPAEFEAWLAAAEVQEKERAARKAEQLRRNERRARNAPRDED

Specific function: Binds GTP and GDP [H]

COG id: COG1161

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI93277113, Length=297, Percent_Identity=31.6498316498317, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI7019419, Length=249, Percent_Identity=28.9156626506024, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI45593130, Length=274, Percent_Identity=25.9124087591241, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI45643129, Length=274, Percent_Identity=25.9124087591241, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI45643127, Length=274, Percent_Identity=25.9124087591241, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI193211047, Length=203, Percent_Identity=32.0197044334975, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI32563985, Length=226, Percent_Identity=28.7610619469027, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI71990926, Length=226, Percent_Identity=28.7610619469027, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI32563983, Length=226, Percent_Identity=28.7610619469027, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17534827, Length=287, Percent_Identity=25.4355400696864, Blast_Score=70, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6324381, Length=258, Percent_Identity=27.5193798449612, Blast_Score=76, Evalue=6e-15,
Organism=Saccharomyces cerevisiae, GI6320842, Length=297, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6323744, Length=225, Percent_Identity=29.7777777777778, Blast_Score=70, Evalue=5e-13,
Organism=Drosophila melanogaster, GI85815858, Length=310, Percent_Identity=30.3225806451613, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI19922460, Length=281, Percent_Identity=29.5373665480427, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI28572990, Length=182, Percent_Identity=29.6703296703297, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023179
- InterPro:   IPR019991
- InterPro:   IPR016478
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 35174; Mature: 35042

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIQWFPGHMHLTRKAIGERIKDIDVVIELLDARLPGSSSNPLLAELTGHKPALKVLNKQ
CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHCHH
DVADPTRTPAWLAWYNARPGTSAIALDASDAAPARRLIDACRQLAPNRRGLSKPMRVLIC
CCCCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
GIPNVGKSTLINTLSAKREAKTGDEAGVTKQEQRIVLDDDFYLWDTPGMLWPRITVPESG
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCEEEECCCCCCCCEEECCCCC
YKLAASGAVGRNAYDEEEVALELLAYLKQHYAPLLDARYKLGLDAAAIAAKHDDELLELI
CEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHH
ARKRGAVMSGGRLNLQKAAEIVLTDLRSAALGRVTLETPAEFEAWLAAAEVQEKERAARK
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHH
AEQLRRNERRARNAPRDED
HHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AIQWFPGHMHLTRKAIGERIKDIDVVIELLDARLPGSSSNPLLAELTGHKPALKVLNKQ
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHCHH
DVADPTRTPAWLAWYNARPGTSAIALDASDAAPARRLIDACRQLAPNRRGLSKPMRVLIC
CCCCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
GIPNVGKSTLINTLSAKREAKTGDEAGVTKQEQRIVLDDDFYLWDTPGMLWPRITVPESG
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCEEEECCCCCCCCEEECCCCC
YKLAASGAVGRNAYDEEEVALELLAYLKQHYAPLLDARYKLGLDAAAIAAKHDDELLELI
CEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHH
ARKRGAVMSGGRLNLQKAAEIVLTDLRSAALGRVTLETPAEFEAWLAAAEVQEKERAARK
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHH
AEQLRRNERRARNAPRDED
HHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]