| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110531
Identifier: 222110531
GI number: 222110531
Start: 1389382
End: 1390029
Strand: Direct
Name: 222110531
Synonym: Dtpsy_1330
Alternate gene names: NA
Gene position: 1389382-1390029 (Clockwise)
Preceding gene: 222110527
Following gene: 222110532
Centisome position: 36.6
GC content: 61.11
Gene sequence:
>648_bases ATGACCCAGCCGCCCGTAGACACAATCCCCGACCTCTTGCAGCGCAGCTTGCCGCGCGAACTGGTGATGGCCGTCGAAGA AGCGTTGAGCGTCGGTGCCCAGCGTGCGCACGCGGCGTCCAAAGGCATGGACGAGGGCCACTTGCCGCATGTGGTTGGTC AGCTGCGGCATTTCCACATGAATGAGGCGTTTCACCGAGCGCTGGCGATGGGAGAGGCCTCGCCGACTGCTATTCGTGGC AACGGCATCGTTAGCGGCCGGGCAGGGGTTTTCACACTGGCCAGGTTCAACATTCCGGATGGCTTCTGGGTCAATGGCCG ACGTAGCCACACGCGCCGCCAGATGTCATTTGCCAACAAGGCCATCGAGCCGTTGGTGCAACCGGAATTGTTCGATCAAT ACACCGCGCCTTCCGATGCCGTCGCGTTTTTCGTGGCGTGCTTCTCGGGCTCGCTGCATATACATCCGGATGCGCCCGTA TCGATCCAGATCGCGGTGCCTGATCGTGAGATGCGGGGCTGGCTGTTCAAGGAGCCGCTGACTGCGTTCCTGCAGCGGTA CGAGCAAAAGCCTGCGGCGCAAGACGATTTGGCCAAGCCCAAGCTCAAGAAGATCAAGAAGCAGAGCAACGACGGCAGCG TGCCATGA
Upstream 100 bases:
>100_bases TACGGATTGCCATAGAGGCAACCAATCACACATCTTTTCGCGCTAAACGAAACTTTTACGTGGCAAAATGCCGACAAGCG AAATCAGACTTGGAGAGCGT
Downstream 100 bases:
>100_bases GCCGCGGAGGTATTCAAGGCTTTGAGAGTGAGCGCCTCAGTCAGATTCTTGCCGCGAGGCGTTTGAGCCAGGCGCAACTT GCCTCGCTGGTCGGCGTGTC
Product: phage-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MTQPPVDTIPDLLQRSLPRELVMAVEEALSVGAQRAHAASKGMDEGHLPHVVGQLRHFHMNEAFHRALAMGEASPTAIRG NGIVSGRAGVFTLARFNIPDGFWVNGRRSHTRRQMSFANKAIEPLVQPELFDQYTAPSDAVAFFVACFSGSLHIHPDAPV SIQIAVPDREMRGWLFKEPLTAFLQRYEQKPAAQDDLAKPKLKKIKKQSNDGSVP
Sequences:
>Translated_215_residues MTQPPVDTIPDLLQRSLPRELVMAVEEALSVGAQRAHAASKGMDEGHLPHVVGQLRHFHMNEAFHRALAMGEASPTAIRG NGIVSGRAGVFTLARFNIPDGFWVNGRRSHTRRQMSFANKAIEPLVQPELFDQYTAPSDAVAFFVACFSGSLHIHPDAPV SIQIAVPDREMRGWLFKEPLTAFLQRYEQKPAAQDDLAKPKLKKIKKQSNDGSVP >Mature_214_residues TQPPVDTIPDLLQRSLPRELVMAVEEALSVGAQRAHAASKGMDEGHLPHVVGQLRHFHMNEAFHRALAMGEASPTAIRGN GIVSGRAGVFTLARFNIPDGFWVNGRRSHTRRQMSFANKAIEPLVQPELFDQYTAPSDAVAFFVACFSGSLHIHPDAPVS IQIAVPDREMRGWLFKEPLTAFLQRYEQKPAAQDDLAKPKLKKIKKQSNDGSVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23767; Mature: 23636
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPPVDTIPDLLQRSLPRELVMAVEEALSVGAQRAHAASKGMDEGHLPHVVGQLRHFHM CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH NEAFHRALAMGEASPTAIRGNGIVSGRAGVFTLARFNIPDGFWVNGRRSHTRRQMSFANK HHHHHHHHHHCCCCCCEEECCCEEECCCCEEEEEEECCCCCCEECCCHHHHHHHHHHHHH AIEPLVQPELFDQYTAPSDAVAFFVACFSGSLHIHPDAPVSIQIAVPDREMRGWLFKEPL HHHHHCCHHHHHHHCCCHHHHHHHHHHHCCCEEECCCCCEEEEEECCCHHHHCHHHHHHH TAFLQRYEQKPAAQDDLAKPKLKKIKKQSNDGSVP HHHHHHHHHCCCCHHHHCCHHHHHHHHCCCCCCCC >Mature Secondary Structure TQPPVDTIPDLLQRSLPRELVMAVEEALSVGAQRAHAASKGMDEGHLPHVVGQLRHFHM CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH NEAFHRALAMGEASPTAIRGNGIVSGRAGVFTLARFNIPDGFWVNGRRSHTRRQMSFANK HHHHHHHHHHCCCCCCEEECCCEEECCCCEEEEEEECCCCCCEECCCHHHHHHHHHHHHH AIEPLVQPELFDQYTAPSDAVAFFVACFSGSLHIHPDAPVSIQIAVPDREMRGWLFKEPL HHHHHCCHHHHHHHCCCHHHHHHHHHHHCCCEEECCCCCEEEEEECCCHHHHCHHHHHHH TAFLQRYEQKPAAQDDLAKPKLKKIKKQSNDGSVP HHHHHHHHHCCCCHHHHCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA