Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is 222110532

Identifier: 222110532

GI number: 222110532

Start: 1390026

End: 1391231

Strand: Direct

Name: 222110532

Synonym: Dtpsy_1331

Alternate gene names: NA

Gene position: 1390026-1391231 (Clockwise)

Preceding gene: 222110531

Following gene: 222110533

Centisome position: 36.61

GC content: 62.27

Gene sequence:

>1206_bases
ATGAGCCGCGGAGGTATTCAAGGCTTTGAGAGTGAGCGCCTCAGTCAGATTCTTGCCGCGAGGCGTTTGAGCCAGGCGCA
ACTTGCCTCGCTGGTCGGCGTGTCCCCCGCAACGGTCAGCAAATGGCGTTCGGGCAATCAGGCCCCCGAACGTGAAACCC
TGGAGCGTCTTGCCGGCGTGGTCAATGTCACGCCTGAATGGTTCACCCGGGCGCCCTCTGCCAAGGTGTCGCTGCCGCTG
TTTCGTAGCAATGCGTCCGCCCACGTGGCGGCACGTGCGATGCTGGAAGCGCGCATGGAGTGGGCGCAGGACGTCGCGCT
CGCGTTGTCGGAGTTCGTGGACTATCCGACACTGAATTTGCCGATCCGGCAGTTCAAAGAGCCCGACGAGATCACGCCTG
ACGAGATTGAGCTGGCGGCGAGCGAGTGCCGCGATCTTTGGCGTATCGGCCGCACGGCGGTGCCGGACTTGGCGCTGGCC
ATTGAAGGCGCTGGCGTCGTCCTGATCCGCGAGGAAACTGGCATTTCGCAGATCGAGGGCCTGTCGGCATGGAGCGATGC
GCTGGGGCGTCCGCTGGTCTTGCTCTCGGCCGACAAGGATAACGGCTATCGAAGCCGCTTCGACTTGGCGCACGAACTCG
GCCACCTGATCCTGCATCGGTTCATTCCCCGACCGACTGAGCGTGACCGCCATAAGCAGCTGGAACAGCAGGCCCATCGC
TTTGCGGGCGCGTTCCTGCTGCCGGCGGAAACATTCGCGAGTGAGGTCCGCACGCCAGTCACGCTGGACGATCTTCTCTT
GCTCAAACGCAGATGGGGTGTTTCCGTCGCGGCGATCGTGATGCGTCTGCGTGCGTTGAAGATTCTCGATGAAGAGGCGG
CGCAGTCACTCTTCAAACGACGGTCCGCACGTTGGGGCGCCAAGTCCGAGCCGGGCGATGGCGATAGGTCGCCAGAACGG
CCGCGCCTGCTACGTCGAACGATCGATCTTCTTGTCGAGGAGAACGTGATGCCCCTCGACTCGATCCCCAGGCACATTGG
CTTGGCGGCCCATGACATTGAGATGCTGGCGGGCTTGTCGGAAGGATACTTTCAGGGCAAACCCAAGGTTGTGCAGTTGG
CTCGTTTGCGTTCAGCGCCCAGCCCGGATGCACCTGTTGCCACGGAAGGCAATGTCGTGCCGTTTAGATTTACGCCGAAG
CGTTGA

Upstream 100 bases:

>100_bases
CGTTCCTGCAGCGGTACGAGCAAAAGCCTGCGGCGCAAGACGATTTGGCCAAGCCCAAGCTCAAGAAGATCAAGAAGCAG
AGCAACGACGGCAGCGTGCC

Downstream 100 bases:

>100_bases
TCGGCGCGCCCATGGAGGTCAATGCCATTTCGATCGAGCCCTCACTAGTTATGTTGCAGGACAACGGCATCTATTGTGGC
AAGAACCGCCAACTCATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Helix-Turn-Helix Domain Protein; Helix-Turn-Helix Domain-Containing Protein; Zn Peptidase; Transcriptional Regulator HTH_3 Family; Conserved Domain Protein; XRE Family Transcriptional Regulator; Phage-Like Protein; Regulatory Protein; Transcription Regulator; DNA-Bining Transcriptional Regulator; Adenine Deaminase

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MSRGGIQGFESERLSQILAARRLSQAQLASLVGVSPATVSKWRSGNQAPERETLERLAGVVNVTPEWFTRAPSAKVSLPL
FRSNASAHVAARAMLEARMEWAQDVALALSEFVDYPTLNLPIRQFKEPDEITPDEIELAASECRDLWRIGRTAVPDLALA
IEGAGVVLIREETGISQIEGLSAWSDALGRPLVLLSADKDNGYRSRFDLAHELGHLILHRFIPRPTERDRHKQLEQQAHR
FAGAFLLPAETFASEVRTPVTLDDLLLLKRRWGVSVAAIVMRLRALKILDEEAAQSLFKRRSARWGAKSEPGDGDRSPER
PRLLRRTIDLLVEENVMPLDSIPRHIGLAAHDIEMLAGLSEGYFQGKPKVVQLARLRSAPSPDAPVATEGNVVPFRFTPK
R

Sequences:

>Translated_401_residues
MSRGGIQGFESERLSQILAARRLSQAQLASLVGVSPATVSKWRSGNQAPERETLERLAGVVNVTPEWFTRAPSAKVSLPL
FRSNASAHVAARAMLEARMEWAQDVALALSEFVDYPTLNLPIRQFKEPDEITPDEIELAASECRDLWRIGRTAVPDLALA
IEGAGVVLIREETGISQIEGLSAWSDALGRPLVLLSADKDNGYRSRFDLAHELGHLILHRFIPRPTERDRHKQLEQQAHR
FAGAFLLPAETFASEVRTPVTLDDLLLLKRRWGVSVAAIVMRLRALKILDEEAAQSLFKRRSARWGAKSEPGDGDRSPER
PRLLRRTIDLLVEENVMPLDSIPRHIGLAAHDIEMLAGLSEGYFQGKPKVVQLARLRSAPSPDAPVATEGNVVPFRFTPK
R
>Mature_400_residues
SRGGIQGFESERLSQILAARRLSQAQLASLVGVSPATVSKWRSGNQAPERETLERLAGVVNVTPEWFTRAPSAKVSLPLF
RSNASAHVAARAMLEARMEWAQDVALALSEFVDYPTLNLPIRQFKEPDEITPDEIELAASECRDLWRIGRTAVPDLALAI
EGAGVVLIREETGISQIEGLSAWSDALGRPLVLLSADKDNGYRSRFDLAHELGHLILHRFIPRPTERDRHKQLEQQAHRF
AGAFLLPAETFASEVRTPVTLDDLLLLKRRWGVSVAAIVMRLRALKILDEEAAQSLFKRRSARWGAKSEPGDGDRSPERP
RLLRRTIDLLVEENVMPLDSIPRHIGLAAHDIEMLAGLSEGYFQGKPKVVQLARLRSAPSPDAPVATEGNVVPFRFTPKR

Specific function: Unknown

COG id: COG2856

COG function: function code E; Predicted Zn peptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44533; Mature: 44401

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRGGIQGFESERLSQILAARRLSQAQLASLVGVSPATVSKWRSGNQAPERETLERLAGV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHH
VNVTPEWFTRAPSAKVSLPLFRSNASAHVAARAMLEARMEWAQDVALALSEFVDYPTLNL
HCCCHHHHHCCCCCCEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PIRQFKEPDEITPDEIELAASECRDLWRIGRTAVPDLALAIEGAGVVLIREETGISQIEG
CHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCEEEEECCCCCHHHHC
LSAWSDALGRPLVLLSADKDNGYRSRFDLAHELGHLILHRFIPRPTERDRHKQLEQQAHR
CHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
FAGAFLLPAETFASEVRTPVTLDDLLLLKRRWGVSVAAIVMRLRALKILDEEAAQSLFKR
HHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSARWGAKSEPGDGDRSPERPRLLRRTIDLLVEENVMPLDSIPRHIGLAAHDIEMLAGLS
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCC
EGYFQGKPKVVQLARLRSAPSPDAPVATEGNVVPFRFTPKR
CHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCC
>Mature Secondary Structure 
SRGGIQGFESERLSQILAARRLSQAQLASLVGVSPATVSKWRSGNQAPERETLERLAGV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHH
VNVTPEWFTRAPSAKVSLPLFRSNASAHVAARAMLEARMEWAQDVALALSEFVDYPTLNL
HCCCHHHHHCCCCCCEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PIRQFKEPDEITPDEIELAASECRDLWRIGRTAVPDLALAIEGAGVVLIREETGISQIEG
CHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCEEEEECCCCCHHHHC
LSAWSDALGRPLVLLSADKDNGYRSRFDLAHELGHLILHRFIPRPTERDRHKQLEQQAHR
CHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
FAGAFLLPAETFASEVRTPVTLDDLLLLKRRWGVSVAAIVMRLRALKILDEEAAQSLFKR
HHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSARWGAKSEPGDGDRSPERPRLLRRTIDLLVEENVMPLDSIPRHIGLAAHDIEMLAGLS
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCC
EGYFQGKPKVVQLARLRSAPSPDAPVATEGNVVPFRFTPKR
CHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA