| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110472
Identifier: 222110472
GI number: 222110472
Start: 1330229
End: 1330891
Strand: Direct
Name: 222110472
Synonym: Dtpsy_1269
Alternate gene names: NA
Gene position: 1330229-1330891 (Clockwise)
Preceding gene: 222110471
Following gene: 222110476
Centisome position: 35.04
GC content: 56.26
Gene sequence:
>663_bases ATGAAGATCCACCCATTCGTTGAGGCAGTTGCTTCGCTGCAATTCGAAGACTGCTTCAATCCGTATTCGGATCGATGTGA AGTCCATGATCGGCGCGATGCGCCGCGTCGCCGTGCTGCAGCACTTTCCGCCATGTTGCGTCGTGCAACCGAGGAGCCCG TAGATGCGATCTGGATCGGGAGAGACCTCGGATATCGCGGAGGGCGCCGAACTGGGCTAGCCCTGACTGACGACGTTCAC ATGAGCCAGCACGCCAAGCGCTGGAATCTCGATCTGATCGCTGAACGGCCGACGATAGGAAGTGCTGTTGCTGAACGAAC CGCGGCGGTCATATGGGGCATGCTGGAACACATTGATGCCCGCATCTTCCTCTGGAATGTCTTTCCCCTTCATCCGCATG AATCTGGAGATCCATTCACCAACCGCCAGCACAACGCGCACGAAAGACGCGCCGGCGAAGAACTGCTTCAACAACTCATT GTCTTGCTGAAGCCTTCTCGCATCGTTGCCATCGGCAATGATGCCACCGCTGCGGCCCATCGCATCACGGATTCTGTACC GGTGATTTGCGTGAGGCACCCTAGCTATGGAGGACAGACACAGTTCCAGACGCAAATCTCGGAACTCTATGGGCACCCAA TGAGTACCGGATCATTGTTTTGA
Upstream 100 bases:
>100_bases GGTATGCGGTCTTCCGACAGCTTAAGGAAAATCAAGGCGGCTGGATCATTGGAAACCGAGAACAACGCACCATCAAATAC ATGCCACTTGAGTCTGAAAA
Downstream 100 bases:
>100_bases CGAGACGTTCTGACTTCTAGCGTGCGGCGATCGCTGCTTCGATCCAACTCGACAGGTTGTCGCTGATGGAGGTATAGACC GCGCTACTGGTACCTCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MKIHPFVEAVASLQFEDCFNPYSDRCEVHDRRDAPRRRAAALSAMLRRATEEPVDAIWIGRDLGYRGGRRTGLALTDDVH MSQHAKRWNLDLIAERPTIGSAVAERTAAVIWGMLEHIDARIFLWNVFPLHPHESGDPFTNRQHNAHERRAGEELLQQLI VLLKPSRIVAIGNDATAAAHRITDSVPVICVRHPSYGGQTQFQTQISELYGHPMSTGSLF
Sequences:
>Translated_220_residues MKIHPFVEAVASLQFEDCFNPYSDRCEVHDRRDAPRRRAAALSAMLRRATEEPVDAIWIGRDLGYRGGRRTGLALTDDVH MSQHAKRWNLDLIAERPTIGSAVAERTAAVIWGMLEHIDARIFLWNVFPLHPHESGDPFTNRQHNAHERRAGEELLQQLI VLLKPSRIVAIGNDATAAAHRITDSVPVICVRHPSYGGQTQFQTQISELYGHPMSTGSLF >Mature_220_residues MKIHPFVEAVASLQFEDCFNPYSDRCEVHDRRDAPRRRAAALSAMLRRATEEPVDAIWIGRDLGYRGGRRTGLALTDDVH MSQHAKRWNLDLIAERPTIGSAVAERTAAVIWGMLEHIDARIFLWNVFPLHPHESGDPFTNRQHNAHERRAGEELLQQLI VLLKPSRIVAIGNDATAAAHRITDSVPVICVRHPSYGGQTQFQTQISELYGHPMSTGSLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24774; Mature: 24774
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIHPFVEAVASLQFEDCFNPYSDRCEVHDRRDAPRRRAAALSAMLRRATEEPVDAIWIG CCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEC RDLGYRGGRRTGLALTDDVHMSQHAKRWNLDLIAERPTIGSAVAERTAAVIWGMLEHIDA CCCCCCCCCCCCCEEECCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCC RIFLWNVFPLHPHESGDPFTNRQHNAHERRAGEELLQQLIVLLKPSRIVAIGNDATAAAH EEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHH RITDSVPVICVRHPSYGGQTQFQTQISELYGHPMSTGSLF HHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKIHPFVEAVASLQFEDCFNPYSDRCEVHDRRDAPRRRAAALSAMLRRATEEPVDAIWIG CCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEC RDLGYRGGRRTGLALTDDVHMSQHAKRWNLDLIAERPTIGSAVAERTAAVIWGMLEHIDA CCCCCCCCCCCCCEEECCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCC RIFLWNVFPLHPHESGDPFTNRQHNAHERRAGEELLQQLIVLLKPSRIVAIGNDATAAAH EEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHH RITDSVPVICVRHPSYGGQTQFQTQISELYGHPMSTGSLF HHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA