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The map label for this gene is ykfG [C]

Identifier: 222110476

GI number: 222110476

Start: 1333561

End: 1334067

Strand: Direct

Name: ykfG [C]

Synonym: Dtpsy_1273

Alternate gene names: 222110476

Gene position: 1333561-1334067 (Clockwise)

Preceding gene: 222110472

Following gene: 222110477

Centisome position: 35.13

GC content: 64.1

Gene sequence:

>507_bases
ATGTCGCAACTTTCTCTGTCTCTCGATTCTTCGCTGCTGGTGCGTGACGCGCAGGGGCGTTACCTGCTGGCGTCGGCGGA
CCAGATTCTGGCGGCGGCACGCCAGGTCATCGACCAGAAGAACCCACGCGGGACGCTGTTCACTTCGCCGGCGCTGGTCA
AGGACTACCTTCGCACCAAGCTGGCCAGCTTCGAGCACGAGGTCTTCGCGGCGCTGTTCCTAGACAGCCAGCATCGGCTG
ATCGAGTACGTGGAACTGTTCCGCGGCACCATCGACCAGGCATCGGTGTATCCGCGCGAGGTCGTGAAGGAGGCACTGCG
GCTCAACGCGGCAGCGGTGGTCTTTTCGCACAATCATCCGAGCGGGAGTCCCGAGCCGAGCCAGGCCGACAGGGTTCTGA
CCCAGCGCCTCAAGGAAGCCCTGGCGCTGGTGGACGTGCGCACGCTGGATCACATCGTCGTCGGCGGCGCGGTCACCACG
TCATTCGCCGAATGTGGCCTACTCTGA

Upstream 100 bases:

>100_bases
GCGCTTGCGGCCGTGGCCGTCTTCAACCCTGTGACGGCTTTCGCTGCGCCGTGCTGGGGCCGGTTCCAGGCAATTCCGCC
TGAGCAACCGGAGCACGATC

Downstream 100 bases:

>100_bases
CCACGGGGGCTTCGGCCCCCTTTTTGCTGCGCCCGGCGGCGCAACTCCGGCTCTCACGGGCCTGCGCGTGCTGCGCACTT
GCCGAAAGCAGGTCTGCGTG

Product: DNA repair protein Radc

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MSQLSLSLDSSLLVRDAQGRYLLASADQILAAARQVIDQKNPRGTLFTSPALVKDYLRTKLASFEHEVFAALFLDSQHRL
IEYVELFRGTIDQASVYPREVVKEALRLNAAAVVFSHNHPSGSPEPSQADRVLTQRLKEALALVDVRTLDHIVVGGAVTT
SFAECGLL

Sequences:

>Translated_168_residues
MSQLSLSLDSSLLVRDAQGRYLLASADQILAAARQVIDQKNPRGTLFTSPALVKDYLRTKLASFEHEVFAALFLDSQHRL
IEYVELFRGTIDQASVYPREVVKEALRLNAAAVVFSHNHPSGSPEPSQADRVLTQRLKEALALVDVRTLDHIVVGGAVTT
SFAECGLL
>Mature_167_residues
SQLSLSLDSSLLVRDAQGRYLLASADQILAAARQVIDQKNPRGTLFTSPALVKDYLRTKLASFEHEVFAALFLDSQHRLI
EYVELFRGTIDQASVYPREVVKEALRLNAAAVVFSHNHPSGSPEPSQADRVLTQRLKEALALVDVRTLDHIVVGGAVTTS
FAECGLL

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI2367100, Length=125, Percent_Identity=55.2, Blast_Score=143, Evalue=6e-36,
Organism=Escherichia coli, GI1788997, Length=125, Percent_Identity=53.6, Blast_Score=139, Evalue=7e-35,
Organism=Escherichia coli, GI87082300, Length=120, Percent_Identity=45, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1788312, Length=125, Percent_Identity=52, Blast_Score=132, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 18444; Mature: 18313

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS01302 RADC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLSLSLDSSLLVRDAQGRYLLASADQILAAARQVIDQKNPRGTLFTSPALVKDYLRTK
CCCCCCCCCCHHEEECCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHH
LASFEHEVFAALFLDSQHRLIEYVELFRGTIDQASVYPREVVKEALRLNAAAVVFSHNHP
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHEEEEECCCC
SGSPEPSQADRVLTQRLKEALALVDVRTLDHIVVGGAVTTSFAECGLL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SQLSLSLDSSLLVRDAQGRYLLASADQILAAARQVIDQKNPRGTLFTSPALVKDYLRTK
CCCCCCCCCHHEEECCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHH
LASFEHEVFAALFLDSQHRLIEYVELFRGTIDQASVYPREVVKEALRLNAAAVVFSHNHP
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHEEEEECCCC
SGSPEPSQADRVLTQRLKEALALVDVRTLDHIVVGGAVTTSFAECGLL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]