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The map label for this gene is rimP

Identifier: 222110448

GI number: 222110448

Start: 1307472

End: 1308065

Strand: Direct

Name: rimP

Synonym: Dtpsy_1245

Alternate gene names: 222110448

Gene position: 1307472-1308065 (Clockwise)

Preceding gene: 222110447

Following gene: 222110449

Centisome position: 34.44

GC content: 61.78

Gene sequence:

>594_bases
GTGGCATTGCAGCAAATCGTAGAACAAACCGTGGCCGGGCTGGGCTATGACCTGGTGGAGATTGAGCGCTCCGCCGGAGG
GTTGCTGCGCATTACCATTGACCTGGTTTGGGTGCCGCCCACGGATGAGGTGTCCGCTGCCGTAGGCGTCGAGCAATTCA
TTACCGTAGAGGATTGTGAAAAGGTCACCCGTCAGCTGCAGTTTGCGCTGGAGGTGGAGGGGGTGGACTACACGCGGTTG
GAAGTCTCATCTCCTGGGATCGACCGCTTGTTGCGCAACGAGGCGGACTTCAAGCGTTTCGAGGGCGAGGTGATCGACAT
CACCCTCAAGCAGCCCATGGGCGCTGCGGCGGGAGGGCAAGTGCATGCCAACCGCAAGAAATTCCGGGGAACGCTCGAGC
GTGCCGATTCGGGCGGTTGGCAGATTGTCTGGAGCGATGAGCCGCCCGTGAAGCCGGGGCAGCGCATCAGCAAGAAGCGC
GTGCCAGCGCCTTTGCAGGCCCTTGGTTTCACTTTGGATGAGTTGCGCGAGGCGCGGCTTGCGCCGATCGTGGATTTCAA
AGGACGAGGGACCAAGCCCGGAGAGCCGGGCTGA

Upstream 100 bases:

>100_bases
GTACTTACCGCCCTTTTTTTTTGGGCGTTTGATTTTTGGTTTTTGCAGCCTTGCCGGCCCCGGCGAGGCCTTCACTTGGA
ATTGGATAGAGCGCACGCAC

Downstream 100 bases:

>100_bases
AGGTTGCATAACCGGACTGTCCTCTGAACGGGCAGTTCGTCAGGAATTGAGAAACAGGAGAGCCGTCGCATGAATCGCGA
GTTGTTGATGTTGGTAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MALQQIVEQTVAGLGYDLVEIERSAGGLLRITIDLVWVPPTDEVSAAVGVEQFITVEDCEKVTRQLQFALEVEGVDYTRL
EVSSPGIDRLLRNEADFKRFEGEVIDITLKQPMGAAAGGQVHANRKKFRGTLERADSGGWQIVWSDEPPVKPGQRISKKR
VPAPLQALGFTLDELREARLAPIVDFKGRGTKPGEPG

Sequences:

>Translated_197_residues
MALQQIVEQTVAGLGYDLVEIERSAGGLLRITIDLVWVPPTDEVSAAVGVEQFITVEDCEKVTRQLQFALEVEGVDYTRL
EVSSPGIDRLLRNEADFKRFEGEVIDITLKQPMGAAAGGQVHANRKKFRGTLERADSGGWQIVWSDEPPVKPGQRISKKR
VPAPLQALGFTLDELREARLAPIVDFKGRGTKPGEPG
>Mature_196_residues
ALQQIVEQTVAGLGYDLVEIERSAGGLLRITIDLVWVPPTDEVSAAVGVEQFITVEDCEKVTRQLQFALEVEGVDYTRLE
VSSPGIDRLLRNEADFKRFEGEVIDITLKQPMGAAAGGQVHANRKKFRGTLERADSGGWQIVWSDEPPVKPGQRISKKRV
PAPLQALGFTLDELREARLAPIVDFKGRGTKPGEPG

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_ACIET (B9MGN9)

Other databases:

- EMBL:   CP001392
- RefSeq:   YP_002552712.1
- GeneID:   7383149
- GenomeReviews:   CP001392_GR
- KEGG:   dia:Dtpsy_1245
- ProtClustDB:   PRK14642
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 21633; Mature: 21502

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALQQIVEQTVAGLGYDLVEIERSAGGLLRITIDLVWVPPTDEVSAAVGVEQFITVEDCE
CCHHHHHHHHHHHCCCHHEEEECCCCCEEEEEEEEEEECCCCHHHHHHHHHHHEEHHHHH
KVTRQLQFALEVEGVDYTRLEVSSPGIDRLLRNEADFKRFEGEVIDITLKQPMGAAAGGQ
HHHHHHHHHEEECCCCEEEEEECCCCHHHHHHCCHHHHHHCCCEEEEEECCCCCCCCCCC
VHANRKKFRGTLERADSGGWQIVWSDEPPVKPGQRISKKRVPAPLQALGFTLDELREARL
EECCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHCCCCCHHHHCCCHHHHHHHHC
APIVDFKGRGTKPGEPG
CCEEECCCCCCCCCCCC
>Mature Secondary Structure 
ALQQIVEQTVAGLGYDLVEIERSAGGLLRITIDLVWVPPTDEVSAAVGVEQFITVEDCE
CHHHHHHHHHHHCCCHHEEEECCCCCEEEEEEEEEEECCCCHHHHHHHHHHHEEHHHHH
KVTRQLQFALEVEGVDYTRLEVSSPGIDRLLRNEADFKRFEGEVIDITLKQPMGAAAGGQ
HHHHHHHHHEEECCCCEEEEEECCCCHHHHHHCCHHHHHHCCCEEEEEECCCCCCCCCCC
VHANRKKFRGTLERADSGGWQIVWSDEPPVKPGQRISKKRVPAPLQALGFTLDELREARL
EECCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHCCCCCHHHHCCCHHHHHHHHC
APIVDFKGRGTKPGEPG
CCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA