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The map label for this gene is cc4 [H]

Identifier: 222110445

GI number: 222110445

Start: 1304873

End: 1305610

Strand: Direct

Name: cc4 [H]

Synonym: Dtpsy_1242

Alternate gene names: 222110445

Gene position: 1304873-1305610 (Clockwise)

Preceding gene: 222110444

Following gene: 222110446

Centisome position: 34.37

GC content: 65.31

Gene sequence:

>738_bases
GTGGCTGAGAAATTCTTACGCCCCTTGCTGCACGCGGCAGGGGCGCTGTGCATGCTGCTCGCTGCCTCGGTGGCCGCCGC
GCCGGCCGTGGATATGGCGCCGCGTGTGCAGGCCTGCACCGCGTGCCACGGCAAGCAGGGGCGTGCCACTCCTGACGGTT
ATTTCCCTCGCATCGCGGGAAAGCCGGCGGGATATCTGCACAACCAACTGCTCAATTTCCGGGATGGCCGGCGCAGCTAT
CCGCAGATGGCGTACTTGCTGCAGCATCTGACGGATGACTATCTCCAGGAGATGGCGGACCACTTCGCAAGACTGGACCT
GCCCTATGCGCCACCGGTAGCTGCAGCTGTATCAGCAGCCACACTGGCGCAGGGAGAGAGGCTTGTGCGGTGGGGGGATG
CGAGCCGCCAATTGCCGGCCTGCGTGCAGTGCCATGGCGATGCTCTGGCGGGCGTCGCGCCTTTCATTCCAGGGTTGCTG
GGGCTGTCTCGCGATTATGTGAGCAGCCAGTTGGGGGCCTGGCAGACCGGTCTGCGGCGCGCCCATGCGCCAGATTGCAT
GGCGCGCATCGCCAGCAAACTGACCGCTGACGATGTAAGTTCCATCGCGGCGTGGCTGTCCTCCCGTCCTGTTCCCTCAA
GGTTCACACCGGCGCCGGCATTCAAGGCGCCGCTGCCAATACCCTGTGGCGGCATGGGTTCTCCGGCGTTGCAGGCTGGC
GCGGAGCAGGTGCAATGA

Upstream 100 bases:

>100_bases
GACATCGTGGGGCAGTCCGTGCTTTACATGGCCAATCTTCCGCTGGAGGCTAATGTGTTGTTCCATACCGTCATGGCGAC
CAAAATGCCTTTTGTCGGGC

Downstream 100 bases:

>100_bases
GTGCTTGGCGAAAAAGGCTTGCGACGGCGGGGCTTTCCGTGGCGTTGGTTGCGGGAGGGATCTGGGTATTGAACCGGCTG
GATGAGGCTCCGCTGCCGCA

Product: cytochrome c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MAEKFLRPLLHAAGALCMLLAASVAAAPAVDMAPRVQACTACHGKQGRATPDGYFPRIAGKPAGYLHNQLLNFRDGRRSY
PQMAYLLQHLTDDYLQEMADHFARLDLPYAPPVAAAVSAATLAQGERLVRWGDASRQLPACVQCHGDALAGVAPFIPGLL
GLSRDYVSSQLGAWQTGLRRAHAPDCMARIASKLTADDVSSIAAWLSSRPVPSRFTPAPAFKAPLPIPCGGMGSPALQAG
AEQVQ

Sequences:

>Translated_245_residues
MAEKFLRPLLHAAGALCMLLAASVAAAPAVDMAPRVQACTACHGKQGRATPDGYFPRIAGKPAGYLHNQLLNFRDGRRSY
PQMAYLLQHLTDDYLQEMADHFARLDLPYAPPVAAAVSAATLAQGERLVRWGDASRQLPACVQCHGDALAGVAPFIPGLL
GLSRDYVSSQLGAWQTGLRRAHAPDCMARIASKLTADDVSSIAAWLSSRPVPSRFTPAPAFKAPLPIPCGGMGSPALQAG
AEQVQ
>Mature_244_residues
AEKFLRPLLHAAGALCMLLAASVAAAPAVDMAPRVQACTACHGKQGRATPDGYFPRIAGKPAGYLHNQLLNFRDGRRSYP
QMAYLLQHLTDDYLQEMADHFARLDLPYAPPVAAAVSAATLAQGERLVRWGDASRQLPACVQCHGDALAGVAPFIPGLLG
LSRDYVSSQLGAWQTGLRRAHAPDCMARIASKLTADDVSSIAAWLSSRPVPSRFTPAPAFKAPLPIPCGGMGSPALQAGA
EQVQ

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 25950; Mature: 25819

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKFLRPLLHAAGALCMLLAASVAAAPAVDMAPRVQACTACHGKQGRATPDGYFPRIAG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCC
KPAGYLHNQLLNFRDGRRSYPQMAYLLQHLTDDYLQEMADHFARLDLPYAPPVAAAVSAA
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
TLAQGERLVRWGDASRQLPACVQCHGDALAGVAPFIPGLLGLSRDYVSSQLGAWQTGLRR
HHHHCCHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHAPDCMARIASKLTADDVSSIAAWLSSRPVPSRFTPAPAFKAPLPIPCGGMGSPALQAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
AEQVQ
HHHCC
>Mature Secondary Structure 
AEKFLRPLLHAAGALCMLLAASVAAAPAVDMAPRVQACTACHGKQGRATPDGYFPRIAG
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCC
KPAGYLHNQLLNFRDGRRSYPQMAYLLQHLTDDYLQEMADHFARLDLPYAPPVAAAVSAA
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
TLAQGERLVRWGDASRQLPACVQCHGDALAGVAPFIPGLLGLSRDYVSSQLGAWQTGLRR
HHHHCCHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHAPDCMARIASKLTADDVSSIAAWLSSRPVPSRFTPAPAFKAPLPIPCGGMGSPALQAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
AEQVQ
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]