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The map label for this gene is omp85 [H]

Identifier: 222110434

GI number: 222110434

Start: 1293192

End: 1295489

Strand: Direct

Name: omp85 [H]

Synonym: Dtpsy_1231

Alternate gene names: 222110434

Gene position: 1293192-1295489 (Clockwise)

Preceding gene: 222110433

Following gene: 222110435

Centisome position: 34.06

GC content: 62.36

Gene sequence:

>2298_bases
ATGAGAAAACATATCAATCGCCTGGGCGTGCGTACGGCATCCGCCCTCGCAGCCATGGTTTTTGCCTCCCAAGCCGCATG
GGCGCTGGCGCCGTTCAAGGTGCAGGACATCCGTGTGGAAGGCCTGCAACGTGTGGAGCCGGGCACCATCTTCGCGTCGT
TGCCGCTGCGCGTGGGTGACGAGTACAACGATGACAAGGGTGCAGCAGCCATCCGCGCGCTGTTTGCCCTTGGCCTGTTC
AAGGACGTGCGCCTGGAGGCTTCCGGCAACGTGCTGGTGGTGGTGGTGGAAGAGCGACCGACCATCGCCGACGTGGATTT
CGCCGGCACCAAGGAGTTCGACAAGGACACCCTCAAGAAGGCCATGCGCGACGTGGGTTTGACCGAGGGGCGCCCCTTCG
ACAAGGCCCTGGCCGACCGCGCCGAGCAGGAACTCAAGCGCCAGTACATCAACCGCAGCCTGTACGGCGCGGAGGTGGTG
ACCACCGTCACGCCGATCGAGCGCAACCGCGTCAACCTCACCTTCACCGTCACCGAGGGCGAGCCCGCCAAGATCAAGGA
AATCCGCATCGTCGGCAACAAGGCCTTCAGCGAATCCACGCTCAAGGGGCTGTTCGACCAGGACACGGGCGGCTGGATGA
GCTGGTACACCAAATCCAACCGCTATTCGCGCGCCAAGCTCAATGCAGACCTGGAGACACTGCGCTCGTACTATCTGGCG
CGCGGCTTCTTGGAGTTCCGCATCGAATCCACGCAGGTGGCGATTTCGCCCGACAAGCAGGACATCTCGATTACCGTCAA
CGTGAACGAAGGCCAGAGCTATGTGGTTTCAGGAGTGAAGTTGGAAGGCAACTACCTGGACCGCGATGACGAGTTCAAGT
CGCTCATCACCATCCGCCCTGGCGAGCCCTACAACGCCGACAAGGTGGCCGAAACCACCAAGGCTTTCACTGACCACTTC
GGCAACTTCGGCTTTGCCTTCGCGCGTGTGGAGGCCGTGCCCGAGATCGATCGCGAGAACAACCGCGTGGCCCTGGTGCT
GCGCGCAGAGCCCTCGCGCCGCGCCTATGTGCGCCGGATCAACGTGAGCGGTAACAACCGCACCCGCGACGAAGTCATCC
GCCGCGAATTCCGCCAGTTTGAAGCCTCCTGGTACGACGGCGACAAGATCAAGCTGTCGCGCGACCGCGTGGACCGCCTG
GGCTATTTCACTGAGGTGAATGTGGAAACCCAGGAGGTGCCGGGCGCGCCCGACCAGGTAGACCTGGTGGTGAACGTGGC
CGAGAAGCCTACGGGCTCGCTGCAACTGGGGGCGGGCTTTTCCAGCGCCGAGAAGGTCTCGGTGTCGTTTGCCATCAAGC
AGGAGAACGTCTTCGGTTCAGGCAACTACCTTGGCGTGGACGTCAACACCAGCAAGTACCGTCGCACGCTGGTGTTTTCC
ACCACCGATCCGTACTTCACGCAGGATGGCATCTCCCGTACCTTCGACGTGTACTACCGCACGGCCAAGCCCTATGAAGA
CCAGGGCGGAAACTATGAACTGGTCACCGCGGGCACCAGTGTGCGCTTGGGCGTACCCTTCAGCGAGACCGACACCGTGT
TCTTCGGGGGGGGAGTGGAGCAGACGCGCATCAAGGCCGGTACCAATATCCCCGCCGCCTACCTCGCCTATGCGCAGCAG
TTTGGTGAAACCAGCCTATCCGTGCCGCTCACCATTGGCTGGTCGCGCGATGACCGTGACAGTGCGTTGGCACCGAACTC
CGGGCGGTACCAGCGCCTGAACTCCGAATGGTCCGTAGCCGGCGATGCGCGCTATGTGCGAGCCAACTACCAATACCAGC
AGTACATTCCCTTGAACAAGCAGTTCACCATCGCCTTCAACGGCGAGTTGGGCTTAGGCAAGGGCATGAATGGCCGTCCC
TTCCCGGTGTTCAAGAATTTCTACTCCGGCGGCCTGGGCTCGGTGCGCGGCTTCGACCAGGGCACACTGGGTCCGCGGGA
CGTGACCGGTGCGTCGCTGGGCGGCCCCAAGAAGATCACGCTGAATGCCGAACTCATCGCGCCGTTCCCCGGCGCCGGCA
ACGACCGCACGCTGCGCTGGTTCACTTTCGTGGACGCGGGCAACGTGTACGGCGAGGATGAGAGCTGGGAGCTGGGCGAC
ATGCGCGTCTCAGCTGGTCTGGGCCTGAGCTGGATTTCCCCGCTGGGCCCGCTACGTATCGCCATCGCGCAACCGGTGCG
CAAGTTCGCCGGCGATAAAATCCAGAAACTGCAATTCCAGATCGGAACGTCTTTCTAA

Upstream 100 bases:

>100_bases
TCTCCTCATGATGTCCATCGCCCTGTTCAACGACCTCACCCGGCTTTTTGGCTAACCTTTTCGCCGCCGTTGCGCTGCAC
TGTCGGCTCCAGCTTCATCC

Downstream 100 bases:

>100_bases
TGAAATCCCTTTCCCGCCACATTCCCCTGGTCGTCCTGTTGGGCTCCCTGGCTGCCGCCGTGCCTGCACAGGCACAGGAG
TTCAGGGCCGGCTTTGTGAA

Product: outer membrane protein assembly complex, yaet protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 765; Mature: 765

Protein sequence:

>765_residues
MRKHINRLGVRTASALAAMVFASQAAWALAPFKVQDIRVEGLQRVEPGTIFASLPLRVGDEYNDDKGAAAIRALFALGLF
KDVRLEASGNVLVVVVEERPTIADVDFAGTKEFDKDTLKKAMRDVGLTEGRPFDKALADRAEQELKRQYINRSLYGAEVV
TTVTPIERNRVNLTFTVTEGEPAKIKEIRIVGNKAFSESTLKGLFDQDTGGWMSWYTKSNRYSRAKLNADLETLRSYYLA
RGFLEFRIESTQVAISPDKQDISITVNVNEGQSYVVSGVKLEGNYLDRDDEFKSLITIRPGEPYNADKVAETTKAFTDHF
GNFGFAFARVEAVPEIDRENNRVALVLRAEPSRRAYVRRINVSGNNRTRDEVIRREFRQFEASWYDGDKIKLSRDRVDRL
GYFTEVNVETQEVPGAPDQVDLVVNVAEKPTGSLQLGAGFSSAEKVSVSFAIKQENVFGSGNYLGVDVNTSKYRRTLVFS
TTDPYFTQDGISRTFDVYYRTAKPYEDQGGNYELVTAGTSVRLGVPFSETDTVFFGGGVEQTRIKAGTNIPAAYLAYAQQ
FGETSLSVPLTIGWSRDDRDSALAPNSGRYQRLNSEWSVAGDARYVRANYQYQQYIPLNKQFTIAFNGELGLGKGMNGRP
FPVFKNFYSGGLGSVRGFDQGTLGPRDVTGASLGGPKKITLNAELIAPFPGAGNDRTLRWFTFVDAGNVYGEDESWELGD
MRVSAGLGLSWISPLGPLRIAIAQPVRKFAGDKIQKLQFQIGTSF

Sequences:

>Translated_765_residues
MRKHINRLGVRTASALAAMVFASQAAWALAPFKVQDIRVEGLQRVEPGTIFASLPLRVGDEYNDDKGAAAIRALFALGLF
KDVRLEASGNVLVVVVEERPTIADVDFAGTKEFDKDTLKKAMRDVGLTEGRPFDKALADRAEQELKRQYINRSLYGAEVV
TTVTPIERNRVNLTFTVTEGEPAKIKEIRIVGNKAFSESTLKGLFDQDTGGWMSWYTKSNRYSRAKLNADLETLRSYYLA
RGFLEFRIESTQVAISPDKQDISITVNVNEGQSYVVSGVKLEGNYLDRDDEFKSLITIRPGEPYNADKVAETTKAFTDHF
GNFGFAFARVEAVPEIDRENNRVALVLRAEPSRRAYVRRINVSGNNRTRDEVIRREFRQFEASWYDGDKIKLSRDRVDRL
GYFTEVNVETQEVPGAPDQVDLVVNVAEKPTGSLQLGAGFSSAEKVSVSFAIKQENVFGSGNYLGVDVNTSKYRRTLVFS
TTDPYFTQDGISRTFDVYYRTAKPYEDQGGNYELVTAGTSVRLGVPFSETDTVFFGGGVEQTRIKAGTNIPAAYLAYAQQ
FGETSLSVPLTIGWSRDDRDSALAPNSGRYQRLNSEWSVAGDARYVRANYQYQQYIPLNKQFTIAFNGELGLGKGMNGRP
FPVFKNFYSGGLGSVRGFDQGTLGPRDVTGASLGGPKKITLNAELIAPFPGAGNDRTLRWFTFVDAGNVYGEDESWELGD
MRVSAGLGLSWISPLGPLRIAIAQPVRKFAGDKIQKLQFQIGTSF
>Mature_765_residues
MRKHINRLGVRTASALAAMVFASQAAWALAPFKVQDIRVEGLQRVEPGTIFASLPLRVGDEYNDDKGAAAIRALFALGLF
KDVRLEASGNVLVVVVEERPTIADVDFAGTKEFDKDTLKKAMRDVGLTEGRPFDKALADRAEQELKRQYINRSLYGAEVV
TTVTPIERNRVNLTFTVTEGEPAKIKEIRIVGNKAFSESTLKGLFDQDTGGWMSWYTKSNRYSRAKLNADLETLRSYYLA
RGFLEFRIESTQVAISPDKQDISITVNVNEGQSYVVSGVKLEGNYLDRDDEFKSLITIRPGEPYNADKVAETTKAFTDHF
GNFGFAFARVEAVPEIDRENNRVALVLRAEPSRRAYVRRINVSGNNRTRDEVIRREFRQFEASWYDGDKIKLSRDRVDRL
GYFTEVNVETQEVPGAPDQVDLVVNVAEKPTGSLQLGAGFSSAEKVSVSFAIKQENVFGSGNYLGVDVNTSKYRRTLVFS
TTDPYFTQDGISRTFDVYYRTAKPYEDQGGNYELVTAGTSVRLGVPFSETDTVFFGGGVEQTRIKAGTNIPAAYLAYAQQ
FGETSLSVPLTIGWSRDDRDSALAPNSGRYQRLNSEWSVAGDARYVRANYQYQQYIPLNKQFTIAFNGELGLGKGMNGRP
FPVFKNFYSGGLGSVRGFDQGTLGPRDVTGASLGGPKKITLNAELIAPFPGAGNDRTLRWFTFVDAGNVYGEDESWELGD
MRVSAGLGLSWISPLGPLRIAIAQPVRKFAGDKIQKLQFQIGTSF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=808, Percent_Identity=34.1584158415842, Blast_Score=468, Evalue=1e-133,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 84904; Mature: 84904

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKHINRLGVRTASALAAMVFASQAAWALAPFKVQDIRVEGLQRVEPGTIFASLPLRVGD
CCCHHHHHCCHHHHHHHHHHHHHCCCEEECCEEEEEEECCCCCCCCCCEEEEECCEEECC
EYNDDKGAAAIRALFALGLFKDVRLEASGNVLVVVVEERPTIADVDFAGTKEFDKDTLKK
CCCCCHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECCCCCEEECCCCCCCCCCHHHHHH
AMRDVGLTEGRPFDKALADRAEQELKRQYINRSLYGAEVVTTVTPIERNRVNLTFTVTEG
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEECC
EPAKIKEIRIVGNKAFSESTLKGLFDQDTGGWMSWYTKSNRYSRAKLNADLETLRSYYLA
CCCEEEEEEEECCCCCCHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHH
RGFLEFRIESTQVAISPDKQDISITVNVNEGQSYVVSGVKLEGNYLDRDDEFKSLITIRP
CCEEEEEEECEEEEECCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCEEEEECC
GEPYNADKVAETTKAFTDHFGNFGFAFARVEAVPEIDRENNRVALVLRAEPSRRAYVRRI
CCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEE
NVSGNNRTRDEVIRREFRQFEASWYDGDKIKLSRDRVDRLGYFTEVNVETQEVPGAPDQV
ECCCCCCCHHHHHHHHHHHHHCCEECCCEEEECHHHHHHCCCEEEECEEHHCCCCCCCCE
DLVVNVAEKPTGSLQLGAGFSSAEKVSVSFAIKQENVFGSGNYLGVDVNTSKYRRTLVFS
EEEEEECCCCCCCEEECCCCCCCCEEEEEEEEEECCEECCCCEEEEECCCHHEEEEEEEE
TTDPYFTQDGISRTFDVYYRTAKPYEDQGGNYELVTAGTSVRLGVPFSETDTVFFGGGVE
CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCEEEEECCCCCCCEEEECCCCC
QTRIKAGTNIPAAYLAYAQQFGETSLSVPLTIGWSRDDRDSALAPNSGRYQRLNSEWSVA
EEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCC
GDARYVRANYQYQQYIPLNKQFTIAFNGELGLGKGMNGRPFPVFKNFYSGGLGSVRGFDQ
CCCEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC
GTLGPRDVTGASLGGPKKITLNAELIAPFPGAGNDRTLRWFTFVDAGNVYGEDESWELGD
CCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCEECC
MRVSAGLGLSWISPLGPLRIAIAQPVRKFAGDKIQKLQFQIGTSF
EEEECCCCCHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCC
>Mature Secondary Structure
MRKHINRLGVRTASALAAMVFASQAAWALAPFKVQDIRVEGLQRVEPGTIFASLPLRVGD
CCCHHHHHCCHHHHHHHHHHHHHCCCEEECCEEEEEEECCCCCCCCCCEEEEECCEEECC
EYNDDKGAAAIRALFALGLFKDVRLEASGNVLVVVVEERPTIADVDFAGTKEFDKDTLKK
CCCCCHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECCCCCEEECCCCCCCCCCHHHHHH
AMRDVGLTEGRPFDKALADRAEQELKRQYINRSLYGAEVVTTVTPIERNRVNLTFTVTEG
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEECC
EPAKIKEIRIVGNKAFSESTLKGLFDQDTGGWMSWYTKSNRYSRAKLNADLETLRSYYLA
CCCEEEEEEEECCCCCCHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHH
RGFLEFRIESTQVAISPDKQDISITVNVNEGQSYVVSGVKLEGNYLDRDDEFKSLITIRP
CCEEEEEEECEEEEECCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCEEEEECC
GEPYNADKVAETTKAFTDHFGNFGFAFARVEAVPEIDRENNRVALVLRAEPSRRAYVRRI
CCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEE
NVSGNNRTRDEVIRREFRQFEASWYDGDKIKLSRDRVDRLGYFTEVNVETQEVPGAPDQV
ECCCCCCCHHHHHHHHHHHHHCCEECCCEEEECHHHHHHCCCEEEECEEHHCCCCCCCCE
DLVVNVAEKPTGSLQLGAGFSSAEKVSVSFAIKQENVFGSGNYLGVDVNTSKYRRTLVFS
EEEEEECCCCCCCEEECCCCCCCCEEEEEEEEEECCEECCCCEEEEECCCHHEEEEEEEE
TTDPYFTQDGISRTFDVYYRTAKPYEDQGGNYELVTAGTSVRLGVPFSETDTVFFGGGVE
CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCEEEEECCCCCCCEEEECCCCC
QTRIKAGTNIPAAYLAYAQQFGETSLSVPLTIGWSRDDRDSALAPNSGRYQRLNSEWSVA
EEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCC
GDARYVRANYQYQQYIPLNKQFTIAFNGELGLGKGMNGRPFPVFKNFYSGGLGSVRGFDQ
CCCEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC
GTLGPRDVTGASLGGPKKITLNAELIAPFPGAGNDRTLRWFTFVDAGNVYGEDESWELGD
CCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCEECC
MRVSAGLGLSWISPLGPLRIAIAQPVRKFAGDKIQKLQFQIGTSF
EEEECCCCCHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]