| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110261
Identifier: 222110261
GI number: 222110261
Start: 1089372
End: 1090577
Strand: Direct
Name: 222110261
Synonym: Dtpsy_1048
Alternate gene names: NA
Gene position: 1089372-1090577 (Clockwise)
Preceding gene: 222110260
Following gene: 222110262
Centisome position: 28.69
GC content: 64.59
Gene sequence:
>1206_bases ATGGAAAGCTACTTCCTCGACTGGGCCAATCTGCTGCTGCGCTGGCTGCACGTCATCACTGCCATCGCCTGGGTGGGCTC CTCGTTCTACTTCGTCTTTCTGGACAGCAGCCTCACGCCGCCGGTCGACGAGGACCTGAAGCGCCAGGGCGTGAACGGCG AGCTTTGGGCTGTGCACGGCGGGGGCTTCTACCACCCGGTCAAGTTCAACGTGGCGCCCCCGAAGCTGCCGGACCATCTG CACTGGTTCTTCTGGGAGAGCTACACCACCTGGCTCAGCGGCTTTGCGCTGCTCACGGTTTCGTATCTGTGGAACGCGGG CATCTACCTGGTGCATCCGGCCGACCCGCTCATGTCGCCCGCCATGGCCATCGCGGCGGCACTGGCCTTTCTGGTGGTGT TCTGGCTGCTGTACGACGGCATCTGCCGCGTGTTCGGCCAAAAGGCCAACGGCGATGCCATCGTGGGGACGCTGGTGCTG GTCCTGGTGTGCATCGCCGCGTGGCTGGCCTGCCGCATCTTCCCCGGCCAGGCGGCTTTCCTGCTGATGGGCGCGATGCT CGCCACTTCGATGAGCGCCAACGTGTTCTTCTGGATCATTCCCGGCCAGCGCAAGGTGGTGGCGGCACTGAAGGCCGGCC AGCCGGTGGACCCGGTGCATGGCAAGCGCGGCAAGCAGCGCAGCGTGCACAACACGTACTTCACGCTGCCGGTGCTGTTC GCCATGCTCTCCAACCACTACGGCTGGCTCTACAACCATGGGCAGAACTGGCTGGTACTGATCCTCATGATGTTCGCGGG CGCGGCCATTCGCCAGTTTTTCGTGATGCGCCACGGCTACAAGCTGGGCCGCAACGGCCATCCCTGGCCCTATGCGGCCG TGGGCGTGGTGGTGCTGGTGGGCGTGGTGGTATGGCTCAAGCCGGCTGCGCCGGCCGTGTCCGCCGCCGCGCCGGCCGCC GCAGGCTACGAACAACTGCACGCCGTCATACAAAAACACTGCGTGGTGTGCCACAGCGCCAACACCATCGCGCAGAAGAA CGTGAAGTTCGACACCCCGCAGGACGTGAAGAGCCACGCGCAGCAGATCTACCAACAGGTGGTGCAGCTGCGCAAGATGC CATTTGGCAACCCGGGCGCACTGTCCGACGAAGAGCGCGAAACCTTCAAACGCTGGTACGAAAACGGCGCCAGCATCGCG CCCTGA
Upstream 100 bases:
>100_bases GCTTCCTGCCACGGTGCGCGGCCCCTCTTTTTCTGCTCAGAGCGCCCGCAGTGGTGAGCAGCTTGCAGGCGGCCCGCCGG GCCGCCAAGGTTGAAACACG
Downstream 100 bases:
>100_bases CGCCCCCCGGTATTGCGGGCATCATCCGGGGCCATGCACCTTTACCGATCTGCGCTCCTGCGCTTTGCCGATGACGGCAC GGCCCTGTACGAAGAAGACG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Cytochrome C Subfamily; Cytochrome C Region
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MESYFLDWANLLLRWLHVITAIAWVGSSFYFVFLDSSLTPPVDEDLKRQGVNGELWAVHGGGFYHPVKFNVAPPKLPDHL HWFFWESYTTWLSGFALLTVSYLWNAGIYLVHPADPLMSPAMAIAAALAFLVVFWLLYDGICRVFGQKANGDAIVGTLVL VLVCIAAWLACRIFPGQAAFLLMGAMLATSMSANVFFWIIPGQRKVVAALKAGQPVDPVHGKRGKQRSVHNTYFTLPVLF AMLSNHYGWLYNHGQNWLVLILMMFAGAAIRQFFVMRHGYKLGRNGHPWPYAAVGVVVLVGVVVWLKPAAPAVSAAAPAA AGYEQLHAVIQKHCVVCHSANTIAQKNVKFDTPQDVKSHAQQIYQQVVQLRKMPFGNPGALSDEERETFKRWYENGASIA P
Sequences:
>Translated_401_residues MESYFLDWANLLLRWLHVITAIAWVGSSFYFVFLDSSLTPPVDEDLKRQGVNGELWAVHGGGFYHPVKFNVAPPKLPDHL HWFFWESYTTWLSGFALLTVSYLWNAGIYLVHPADPLMSPAMAIAAALAFLVVFWLLYDGICRVFGQKANGDAIVGTLVL VLVCIAAWLACRIFPGQAAFLLMGAMLATSMSANVFFWIIPGQRKVVAALKAGQPVDPVHGKRGKQRSVHNTYFTLPVLF AMLSNHYGWLYNHGQNWLVLILMMFAGAAIRQFFVMRHGYKLGRNGHPWPYAAVGVVVLVGVVVWLKPAAPAVSAAAPAA AGYEQLHAVIQKHCVVCHSANTIAQKNVKFDTPQDVKSHAQQIYQQVVQLRKMPFGNPGALSDEERETFKRWYENGASIA P >Mature_401_residues MESYFLDWANLLLRWLHVITAIAWVGSSFYFVFLDSSLTPPVDEDLKRQGVNGELWAVHGGGFYHPVKFNVAPPKLPDHL HWFFWESYTTWLSGFALLTVSYLWNAGIYLVHPADPLMSPAMAIAAALAFLVVFWLLYDGICRVFGQKANGDAIVGTLVL VLVCIAAWLACRIFPGQAAFLLMGAMLATSMSANVFFWIIPGQRKVVAALKAGQPVDPVHGKRGKQRSVHNTYFTLPVLF AMLSNHYGWLYNHGQNWLVLILMMFAGAAIRQFFVMRHGYKLGRNGHPWPYAAVGVVVLVGVVVWLKPAAPAVSAAAPAA AGYEQLHAVIQKHCVVCHSANTIAQKNVKFDTPQDVKSHAQQIYQQVVQLRKMPFGNPGALSDEERETFKRWYENGASIA P
Specific function: Unknown
COG id: COG3748
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44580; Mature: 44580
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESYFLDWANLLLRWLHVITAIAWVGSSFYFVFLDSSLTPPVDEDLKRQGVNGELWAVHG CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCCCCEEEEEC GGFYHPVKFNVAPPKLPDHLHWFFWESYTTWLSGFALLTVSYLWNAGIYLVHPADPLMSP CCEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHH AMAIAAALAFLVVFWLLYDGICRVFGQKANGDAIVGTLVLVLVCIAAWLACRIFPGQAAF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH LLMGAMLATSMSANVFFWIIPGQRKVVAALKAGQPVDPVHGKRGKQRSVHNTYFTLPVLF HHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH AMLSNHYGWLYNHGQNWLVLILMMFAGAAIRQFFVMRHGYKLGRNGHPWPYAAVGVVVLV HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHH GVVVWLKPAAPAVSAAAPAAAGYEQLHAVIQKHCVVCHSANTIAQKNVKFDTPQDVKSHA HHHHHHCCCCCCHHHCCCHHCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHH QQIYQQVVQLRKMPFGNPGALSDEERETFKRWYENGASIAP HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MESYFLDWANLLLRWLHVITAIAWVGSSFYFVFLDSSLTPPVDEDLKRQGVNGELWAVHG CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCCCCEEEEEC GGFYHPVKFNVAPPKLPDHLHWFFWESYTTWLSGFALLTVSYLWNAGIYLVHPADPLMSP CCEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHH AMAIAAALAFLVVFWLLYDGICRVFGQKANGDAIVGTLVLVLVCIAAWLACRIFPGQAAF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH LLMGAMLATSMSANVFFWIIPGQRKVVAALKAGQPVDPVHGKRGKQRSVHNTYFTLPVLF HHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH AMLSNHYGWLYNHGQNWLVLILMMFAGAAIRQFFVMRHGYKLGRNGHPWPYAAVGVVVLV HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHH GVVVWLKPAAPAVSAAAPAAAGYEQLHAVIQKHCVVCHSANTIAQKNVKFDTPQDVKSHA HHHHHHCCCCCCHHHCCCHHCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHH QQIYQQVVQLRKMPFGNPGALSDEERETFKRWYENGASIAP HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA