| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is yceI [C]
Identifier: 222110241
GI number: 222110241
Start: 1065662
End: 1066243
Strand: Direct
Name: yceI [C]
Synonym: Dtpsy_1027
Alternate gene names: 222110241
Gene position: 1065662-1066243 (Clockwise)
Preceding gene: 222110240
Following gene: 222110242
Centisome position: 28.07
GC content: 65.12
Gene sequence:
>582_bases ATGATGCAGTCGTCCCTTCCCCGTCTTGCTGGCATGGCACTGGCCGGCGCCGCGCTGCTGGCCGCAGGCAGCGCCTTCGC GCAGCAAAAGCTCGTGCCCGAGCAGAGCGAGATCGTCTTCGTGAGCAAGCAGATGGGCGTGCCCGTCGAGGGTCGCTTCA AGAAGTTTGATGCCCAGGTCGCTTTCGACCCCGCCAAGCCCGCCACCAGCAAGGTGGCGTTCACGGTGGATACCGGCAGT GCCACGCTGGGCGTGAAGGAAACCGATGCCGAGTTGCCCAAGCCCGTGTGGTTCAACGTGCCCAAGTTCCCGCAGGCCAC GTTCCAGTCCAGCGCCATCAAGGCCGTGGGCGCAGGCAAATACGAAGTGGCCGGCAAGCTCAGCATCAAGGGCGCGGCGC ATGACGTCGTGGTGCCCGTCACCCTGACCCAAAGCGGCGCCATCACCACCGCGGCGGGCAGCTTCGCCATCAAGCGCCTG GCGTTCAAGATCGGCGAGAACGAATGGGCCGACACGTCCATGGTGGCCGACGAGGTGCAGGTCAAGTTCAAGCTGGCCCT GACCGGCGTGCCCAAGCTTTAA
Upstream 100 bases:
>100_bases ACCAGCTTATCGACCGTGACGGCCTGGTAGGCCGCATGCTGCCGGCGCGTGGCTGAGCCCGTTTCTCTTCCTGTCCTGAT CCATGAATGGAGCATTCACC
Downstream 100 bases:
>100_bases CGCTTCCCCTTTTTAATCACCAACCTCTACTACGGAGAAACCGACATGCGTTCCACCTTCCTGACCATCGCTGCCGCCGC TGCCCTGACCGCGGGTGCCG
Product: ycei family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MMQSSLPRLAGMALAGAALLAAGSAFAQQKLVPEQSEIVFVSKQMGVPVEGRFKKFDAQVAFDPAKPATSKVAFTVDTGS ATLGVKETDAELPKPVWFNVPKFPQATFQSSAIKAVGAGKYEVAGKLSIKGAAHDVVVPVTLTQSGAITTAAGSFAIKRL AFKIGENEWADTSMVADEVQVKFKLALTGVPKL
Sequences:
>Translated_193_residues MMQSSLPRLAGMALAGAALLAAGSAFAQQKLVPEQSEIVFVSKQMGVPVEGRFKKFDAQVAFDPAKPATSKVAFTVDTGS ATLGVKETDAELPKPVWFNVPKFPQATFQSSAIKAVGAGKYEVAGKLSIKGAAHDVVVPVTLTQSGAITTAAGSFAIKRL AFKIGENEWADTSMVADEVQVKFKLALTGVPKL >Mature_193_residues MMQSSLPRLAGMALAGAALLAAGSAFAQQKLVPEQSEIVFVSKQMGVPVEGRFKKFDAQVAFDPAKPATSKVAFTVDTGS ATLGVKETDAELPKPVWFNVPKFPQATFQSSAIKAVGAGKYEVAGKLSIKGAAHDVVVPVTLTQSGAITTAAGSFAIKRL AFKIGENEWADTSMVADEVQVKFKLALTGVPKL
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787295, Length=138, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=6e-14,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007372 [H]
Pfam domain/function: PF04264 YceI [H]
EC number: NA
Molecular weight: Translated: 20184; Mature: 20184
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQSSLPRLAGMALAGAALLAAGSAFAQQKLVPEQSEIVFVSKQMGVPVEGRFKKFDAQV CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEECCEE AFDPAKPATSKVAFTVDTGSATLGVKETDAELPKPVWFNVPKFPQATFQSSAIKAVGAGK EECCCCCCCCEEEEEEECCCEEECEECCCCCCCCCEEECCCCCCCHHHHHHHHHEECCCC YEVAGKLSIKGAAHDVVVPVTLTQSGAITTAAGSFAIKRLAFKIGENEWADTSMVADEVQ EEEEEEEEECCCCCEEEEEEEEECCCCEEECHHHHHHHHHHHHCCCCCCCCHHHHHHCEE VKFKLALTGVPKL EEEEEEECCCCCC >Mature Secondary Structure MMQSSLPRLAGMALAGAALLAAGSAFAQQKLVPEQSEIVFVSKQMGVPVEGRFKKFDAQV CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEECCEE AFDPAKPATSKVAFTVDTGSATLGVKETDAELPKPVWFNVPKFPQATFQSSAIKAVGAGK EECCCCCCCCEEEEEEECCCEEECEECCCCCCCCCEEECCCCCCCHHHHHHHHHEECCCC YEVAGKLSIKGAAHDVVVPVTLTQSGAITTAAGSFAIKRLAFKIGENEWADTSMVADEVQ EEEEEEEEECCCCCEEEEEEEEECCCCEEECHHHHHHHHHHHHCCCCCCCCHHHHHHCEE VKFKLALTGVPKL EEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA