Click here to switch to the map view.

The map label for this gene is yceJ [H]

Identifier: 222110240

GI number: 222110240

Start: 1065051

End: 1065617

Strand: Direct

Name: yceJ [H]

Synonym: Dtpsy_1026

Alternate gene names: 222110240

Gene position: 1065051-1065617 (Clockwise)

Preceding gene: 222110237

Following gene: 222110241

Centisome position: 28.05

GC content: 67.72

Gene sequence:

>567_bases
ATGACCACCGCTTCCGCACCACGGCCCGCGCGCTACGGCGCCACCGCCATCGCCCTGCACTGGATCATGGGCCTGTCCAT
CGTGGCCGTGATTTGTGTCGGCTGGTACATGACGGGGCTGCCGTTTTCGCCCCAGCGCCTGAAGCTCTACAACTGGCACA
AGTGGGCGGGCGTGGCCATCCTGGCGCTGTCGGTGCTGCGGCTGCTGTGGCGCCTGACCCACCGTCCGCCCGCATTGCCT
GCGGCGGTGCTGGCAGCCATGCCGCGCTGGCAGCAGGCCGCGCATCATGGCGTGCATTACCTGATGTATGCGCTGTTCCT
CATCGTGCCGCTGGTGGGTTGGGCCTACAGCTCGGCCGCGGGCTTTCCCATCGTTTTTCTCGGCCTGGTGCCGCTGCCTG
ACTTTGTGCCGGTCAGTCCTGCCCTGGCGGAGGCCATCAAGCCCCTGCACGCCATCAGCGCCTACGCCTTGACCGCCCTG
GTCGTGCTGCACGTGGCGGCAGCAGTCAAGCACCAGCTTATCGACCGTGACGGCCTGGTAGGCCGCATGCTGCCGGCGCG
TGGCTGA

Upstream 100 bases:

>100_bases
AGCGCACTCTAGACTGCGTCACTTCACCAGAGCGCCGTCTCTGCCGCGGGTTGCATCCGCGCAATCGCCGCGCACTGTTC
CTCTACCGCCACCATTCCGT

Downstream 100 bases:

>100_bases
GCCCGTTTCTCTTCCTGTCCTGATCCATGAATGGAGCATTCACCATGATGCAGTCGTCCCTTCCCCGTCTTGCTGGCATG
GCACTGGCCGGCGCCGCGCT

Product: cytochrome b561

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MTTASAPRPARYGATAIALHWIMGLSIVAVICVGWYMTGLPFSPQRLKLYNWHKWAGVAILALSVLRLLWRLTHRPPALP
AAVLAAMPRWQQAAHHGVHYLMYALFLIVPLVGWAYSSAAGFPIVFLGLVPLPDFVPVSPALAEAIKPLHAISAYALTAL
VVLHVAAAVKHQLIDRDGLVGRMLPARG

Sequences:

>Translated_188_residues
MTTASAPRPARYGATAIALHWIMGLSIVAVICVGWYMTGLPFSPQRLKLYNWHKWAGVAILALSVLRLLWRLTHRPPALP
AAVLAAMPRWQQAAHHGVHYLMYALFLIVPLVGWAYSSAAGFPIVFLGLVPLPDFVPVSPALAEAIKPLHAISAYALTAL
VVLHVAAAVKHQLIDRDGLVGRMLPARG
>Mature_187_residues
TTASAPRPARYGATAIALHWIMGLSIVAVICVGWYMTGLPFSPQRLKLYNWHKWAGVAILALSVLRLLWRLTHRPPALPA
AVLAAMPRWQQAAHHGVHYLMYALFLIVPLVGWAYSSAAGFPIVFLGLVPLPDFVPVSPALAEAIKPLHAISAYALTALV
VLHVAAAVKHQLIDRDGLVGRMLPARG

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI1787296, Length=178, Percent_Identity=30.8988764044944, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI87082013, Length=181, Percent_Identity=29.8342541436464, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 20401; Mature: 20270

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTASAPRPARYGATAIALHWIMGLSIVAVICVGWYMTGLPFSPQRLKLYNWHKWAGVAI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHH
LALSVLRLLWRLTHRPPALPAAVLAAMPRWQQAAHHGVHYLMYALFLIVPLVGWAYSSAA
HHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GFPIVFLGLVPLPDFVPVSPALAEAIKPLHAISAYALTALVVLHVAAAVKHQLIDRDGLV
CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
GRMLPARG
HCCCCCCC
>Mature Secondary Structure 
TTASAPRPARYGATAIALHWIMGLSIVAVICVGWYMTGLPFSPQRLKLYNWHKWAGVAI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHH
LALSVLRLLWRLTHRPPALPAAVLAAMPRWQQAAHHGVHYLMYALFLIVPLVGWAYSSAA
HHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GFPIVFLGLVPLPDFVPVSPALAEAIKPLHAISAYALTALVVLHVAAAVKHQLIDRDGLV
CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
GRMLPARG
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]