| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110223
Identifier: 222110223
GI number: 222110223
Start: 1049911
End: 1050630
Strand: Direct
Name: 222110223
Synonym: Dtpsy_1009
Alternate gene names: NA
Gene position: 1049911-1050630 (Clockwise)
Preceding gene: 222110222
Following gene: 222110226
Centisome position: 27.65
GC content: 67.08
Gene sequence:
>720_bases ATGCTGTGGGCGATGGCCACGACGGCCTTCCTGATGGGGCTGATGGGAGGGGCACACTGTTTGGCGATGTGTTCTGTTCC CTGCGCGGCGCTTACGGGGCTGGGTGGCACGCCGGACGCCACCCACACCATTCAATGGGCGTCCCGCCGCGGAATCCTCC AACGGGTAGCGCAGTTTCACGTGGGGCGCCTGATTGGCTACGGCGCCGCAGGGGCGGTGGTTGCGCTGGCCATGGAGCAA CTCGCGTGGCTGGGGCAAAGCACCTCGGCATTGCGCCCCCTTTGGACGCTGATGCACGTGCTCATCCTCGCGTGGGGAGG GATGATGGTGGTGCAAGCGCAGCAGCCCCTGTGGGTTGAGCGGGCGGGGCGTGCTGCCTGGGCGAAGGTCAAGCCCTTGG TCTCTCGGCCTGGCGGGCTGCTGACCGCGGGTGTGGCCTGGGCGCTCCTGCCATGCGGCCTTCTGTACACCGCACTGTTG ACTGCCGCTCTCAGCGGAAGCGTGCTCCGCGGAGCCTTGTGCATGGTCCTGTTTGGCGTGGGAAGTGGTGTATGGCTGGT GTTGGGGCCGTGGACATTTGGCCGCATTCGCGCTTGGATCGGCGTGAAGGGTGGGGCGTGGGGGTCTCGGCTGGCAGGTG GTGTGCTTTTTTCCCTGGGTGCATGGGCGCTGTGGATGGAGGTTGTCCATGGGCAGCCGGCGCCGTGGTGCGTGCCCTGA
Upstream 100 bases:
>100_bases GCCCATGGGGTGGTATTTCGTGCGGGGCGTGGCCATGGTGTTCGACAAGTATCTACAGGCTGACCGCAACCGCGCTCGCT TTTCCCGGATTATTTGACCC
Downstream 100 bases:
>100_bases AAACAGCGTTTTGTGGAACCACAGCGACTCCGCGAAGCATGCCGTGGCAAGCGAATGGCGCAAACCGAGGCGCTCAGGCG TGACGTATCGCTGTCAGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MLWAMATTAFLMGLMGGAHCLAMCSVPCAALTGLGGTPDATHTIQWASRRGILQRVAQFHVGRLIGYGAAGAVVALAMEQ LAWLGQSTSALRPLWTLMHVLILAWGGMMVVQAQQPLWVERAGRAAWAKVKPLVSRPGGLLTAGVAWALLPCGLLYTALL TAALSGSVLRGALCMVLFGVGSGVWLVLGPWTFGRIRAWIGVKGGAWGSRLAGGVLFSLGAWALWMEVVHGQPAPWCVP
Sequences:
>Translated_239_residues MLWAMATTAFLMGLMGGAHCLAMCSVPCAALTGLGGTPDATHTIQWASRRGILQRVAQFHVGRLIGYGAAGAVVALAMEQ LAWLGQSTSALRPLWTLMHVLILAWGGMMVVQAQQPLWVERAGRAAWAKVKPLVSRPGGLLTAGVAWALLPCGLLYTALL TAALSGSVLRGALCMVLFGVGSGVWLVLGPWTFGRIRAWIGVKGGAWGSRLAGGVLFSLGAWALWMEVVHGQPAPWCVP >Mature_239_residues MLWAMATTAFLMGLMGGAHCLAMCSVPCAALTGLGGTPDATHTIQWASRRGILQRVAQFHVGRLIGYGAAGAVVALAMEQ LAWLGQSTSALRPLWTLMHVLILAWGGMMVVQAQQPLWVERAGRAAWAKVKPLVSRPGGLLTAGVAWALLPCGLLYTALL TAALSGSVLRGALCMVLFGVGSGVWLVLGPWTFGRIRAWIGVKGGAWGSRLAGGVLFSLGAWALWMEVVHGQPAPWCVP
Specific function: Unknown
COG id: COG2836
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25120; Mature: 25120
Theoretical pI: Translated: 11.01; Mature: 11.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWAMATTAFLMGLMGGAHCLAMCSVPCAALTGLGGTPDATHTIQWASRRGILQRVAQFH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH VGRLIGYGAAGAVVALAMEQLAWLGQSTSALRPLWTLMHVLILAWGGMMVVQAQQPLWVE HHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHH RAGRAAWAKVKPLVSRPGGLLTAGVAWALLPCGLLYTALLTAALSGSVLRGALCMVLFGV HCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC GSGVWLVLGPWTFGRIRAWIGVKGGAWGSRLAGGVLFSLGAWALWMEVVHGQPAPWCVP CCCEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLWAMATTAFLMGLMGGAHCLAMCSVPCAALTGLGGTPDATHTIQWASRRGILQRVAQFH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH VGRLIGYGAAGAVVALAMEQLAWLGQSTSALRPLWTLMHVLILAWGGMMVVQAQQPLWVE HHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHH RAGRAAWAKVKPLVSRPGGLLTAGVAWALLPCGLLYTALLTAALSGSVLRGALCMVLFGV HCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC GSGVWLVLGPWTFGRIRAWIGVKGGAWGSRLAGGVLFSLGAWALWMEVVHGQPAPWCVP CCCEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA