| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is eamA [H]
Identifier: 222110186
GI number: 222110186
Start: 1009133
End: 1010053
Strand: Direct
Name: eamA [H]
Synonym: Dtpsy_0972
Alternate gene names: 222110186
Gene position: 1009133-1010053 (Clockwise)
Preceding gene: 222110185
Following gene: 222110189
Centisome position: 26.58
GC content: 70.14
Gene sequence:
>921_bases ATGAGCACGTCGCTGTCGCGGGCCGACTGGGCCAAGGCGCTGGTGGTGGTTGTGGTCTGGGGGCTGAACTTCGTCGTCAT GAAGTGGGGCCTGGCCACGCTGTCGCCGCTGGTGCTGTGCGCGCTGCGCTTCCTGGCGGCGTCGCTGCCGTTCCTGCTAT TCGTGCGCCCGCCGCGGCACCTGTCCTGGGGCGTGATGGCGGCCTATGGCTTGGTGCAGGGTGTGGGACAGTTCGGCCTG CTGTTCACCGGCATGCAGCTGGGCATGCCGGCGGGCATGTCCTCGGTGGTGCTGCAGACGCAGGCATTCATCACCATGCT CATGGCGGCAGCCTTGTTGGGCGAGACGCCGCACCGCTGGCAGTGGCTGGGCCTGTGCATCGCCATCGGCGGGCTGGTGT TCATCGGCGCGGCGCACGGCGACGGCGCCTCCGGCATGACCCTGGCGGGCTTCCTGCTCACCGTGGGGGCCGCGGCCATG TGGGCCGGCTCCAACCTGCTCACGCGCGTGGCGGCGCGCCAGGGGCCGTACGAGCCCGTGTCCTTCATCGTCTGGAGCAG CGTGTTCCCCATCGTGCCGCTGTTGCTGTTGGCCTGCGTGGTGGACGGCATGGAGGCCGTGGTGCAGCAGTTGCGTGGCC TGGGCGGGCGCGAGTTGGGCGTGGTGGCCTATCTGGCGCTGTTGTCCACCCTGCTGGGCTATGGCCTGTGGACGCGCCTG CTGCAGCGCTACGCCGCCAGCACCGTGGCGCCGCTGTCGCTGCTGGTGCCGGTGGTGGGACTGCTGTCGGCCATGCTGCT GCTGGGCGAGCGCCCCACGGCCTGGCAATGGATGGGCACGATGGGCGTGCTGGCGGGCATGGTGATCAACCAGTTCGGCG GGCTGTGGGCCAAGCGCCGCCGCGGGGCTGCATCTATATAG
Upstream 100 bases:
>100_bases GCCGACGCCTACACCTATGGCGCCAAGACGGTGGGCTCCATCCTCATCAACCGCATGAAGGTGGCGGGCAGTTGAGCCGC GCCACGCTGGCAGTCCGCGC
Downstream 100 bases:
>100_bases AAATTGGCTCTAGCGCTTGCCAGTCAAGCGCTAGATGCTCCTGAAAAGGTAGCAAAACACGCGTTCGGCGCGGCAACTTG CCTCTCAGCCGCCGCGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSTSLSRADWAKALVVVVVWGLNFVVMKWGLATLSPLVLCALRFLAASLPFLLFVRPPRHLSWGVMAAYGLVQGVGQFGL LFTGMQLGMPAGMSSVVLQTQAFITMLMAAALLGETPHRWQWLGLCIAIGGLVFIGAAHGDGASGMTLAGFLLTVGAAAM WAGSNLLTRVAARQGPYEPVSFIVWSSVFPIVPLLLLACVVDGMEAVVQQLRGLGGRELGVVAYLALLSTLLGYGLWTRL LQRYAASTVAPLSLLVPVVGLLSAMLLLGERPTAWQWMGTMGVLAGMVINQFGGLWAKRRRGAASI
Sequences:
>Translated_306_residues MSTSLSRADWAKALVVVVVWGLNFVVMKWGLATLSPLVLCALRFLAASLPFLLFVRPPRHLSWGVMAAYGLVQGVGQFGL LFTGMQLGMPAGMSSVVLQTQAFITMLMAAALLGETPHRWQWLGLCIAIGGLVFIGAAHGDGASGMTLAGFLLTVGAAAM WAGSNLLTRVAARQGPYEPVSFIVWSSVFPIVPLLLLACVVDGMEAVVQQLRGLGGRELGVVAYLALLSTLLGYGLWTRL LQRYAASTVAPLSLLVPVVGLLSAMLLLGERPTAWQWMGTMGVLAGMVINQFGGLWAKRRRGAASI >Mature_305_residues STSLSRADWAKALVVVVVWGLNFVVMKWGLATLSPLVLCALRFLAASLPFLLFVRPPRHLSWGVMAAYGLVQGVGQFGLL FTGMQLGMPAGMSSVVLQTQAFITMLMAAALLGETPHRWQWLGLCIAIGGLVFIGAAHGDGASGMTLAGFLLTVGAAAMW AGSNLLTRVAARQGPYEPVSFIVWSSVFPIVPLLLLACVVDGMEAVVQQLRGLGGRELGVVAYLALLSTLLGYGLWTRLL QRYAASTVAPLSLLVPVVGLLSAMLLLGERPTAWQWMGTMGVLAGMVINQFGGLWAKRRRGAASI
Specific function: May be an export pump for cysteine and other metabolites of the cysteine pathway (such as N-acetyl-L-serine (NAS) and O- acetyl-L-serine (OAS)), and for other amino acids and their metabolites [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI87081929, Length=295, Percent_Identity=40.6779661016949, Blast_Score=196, Evalue=1e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32466; Mature: 32335
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSLSRADWAKALVVVVVWGLNFVVMKWGLATLSPLVLCALRFLAASLPFLLFVRPPRH CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC LSWGVMAAYGLVQGVGQFGLLFTGMQLGMPAGMSSVVLQTQAFITMLMAAALLGETPHRW CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH QWLGLCIAIGGLVFIGAAHGDGASGMTLAGFLLTVGAAAMWAGSNLLTRVAARQGPYEPV HHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHH SFIVWSSVFPIVPLLLLACVVDGMEAVVQQLRGLGGRELGVVAYLALLSTLLGYGLWTRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LQRYAASTVAPLSLLVPVVGLLSAMLLLGERPTAWQWMGTMGVLAGMVINQFGGLWAKRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC RGAASI CCCCCC >Mature Secondary Structure STSLSRADWAKALVVVVVWGLNFVVMKWGLATLSPLVLCALRFLAASLPFLLFVRPPRH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC LSWGVMAAYGLVQGVGQFGLLFTGMQLGMPAGMSSVVLQTQAFITMLMAAALLGETPHRW CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH QWLGLCIAIGGLVFIGAAHGDGASGMTLAGFLLTVGAAAMWAGSNLLTRVAARQGPYEPV HHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHH SFIVWSSVFPIVPLLLLACVVDGMEAVVQQLRGLGGRELGVVAYLALLSTLLGYGLWTRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LQRYAASTVAPLSLLVPVVGLLSAMLLLGERPTAWQWMGTMGVLAGMVINQFGGLWAKRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC RGAASI CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8383113; 9097039; 9278503; 10844694 [H]